Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00803 Aquilegia oxysepala HOM05D004981 ORTHO05D005635 2.6e-187 658.7 364 100.0
Medtr2g008810 Medicago truncatula HOM05D004981 ORTHO05D005635 3.0e-74 283.1 374 53.5
MBI02_g08724_MAGBIO Magnolia biondii HOM05D004981 ORTHO05D005635 1.8e-71 273.9 377 53.3
Nn5g30124 Nelumbo nucifera HOM05D004981 ORTHO05D005635 3.1e-71 273.1 416 48.8
CDE10G0645 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 6.5e-69 265.4 423 48.9
Ca_00133_v3 Cicer arietinum L. HOM05D004981 ORTHO05D005635 4.2e-68 262.7 410 48.5
CANSAT11G0061 Cannabis sativa HOM05D004981 ORTHO05D005635 9.4e-68 261.5 396 50.5
Duzib132G0770 Durio zibethinus HOM05D004981 ORTHO05D005635 9.4e-68 261.5 423 45.6
PSO781G0052 Papaver somniferum HOM05D004981 ORTHO05D005635 1.4e-66 257.7 388 49.5
TAR114G0002 Trochodendron aralioides HOM05D004981 ORTHO05D005635 1.8e-66 257.3 344 49.1
PGR142G3166 Punica granatum HOM05D004981 ORTHO05D005635 3.0e-66 256.5 403 49.1
Sed0011642 Sechium edule HOM05D004981 ORTHO05D005635 3.0e-66 256.5 411 47.4
Manes.06G012400 Manihot esculenta HOM05D004981 ORTHO05D005635 1.1e-65 254.6 417 47.7
Dinv24195 Davidia involucrata HOM05D004981 ORTHO05D005635 1.5e-65 254.2 425 47.3
Lj6g0025255 Lotus japonicus HOM05D004981 ORTHO05D005635 2.0e-65 253.8 417 45.6
VMungo0540G0644 Vigna mungo HOM05D004981 ORTHO05D005635 2.0e-65 253.8 390 48.2
GSVIVG01029180001 Vitis vinifera HOM05D004981 ORTHO05D005635 2.0e-65 253.8 409 47.2
MELO3C018646.2 Cucumis melo HOM05D004981 ORTHO05D005635 2.6e-65 253.4 411 46.7
Glyma.15G053300 Glycine max HOM05D004981 ORTHO05D005635 3.3e-65 253.1 411 48.2
TWI59G1067 Tripterygium wilfordii HOM05D004981 ORTHO05D005635 5.7e-65 252.3 415 44.6
CsaV3_7G006460 Cucumis sativus L. HOM05D004981 ORTHO05D005635 9.7e-65 251.5 412 46.1
MD05G1045100 Malus domestica HOM05D004981 ORTHO05D005635 1.3e-64 251.1 419 44.9
Glyma.08G179200 Glycine max HOM05D004981 ORTHO05D005635 2.8e-64 250.0 411 47.4
CSS0034779 Camellia sinensis var. sinensis HOM05D004981 ORTHO05D005635 3.7e-64 249.6 406 48.0
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea HOM05D004981 ORTHO05D005635 6.3e-64 248.8 424 46.7
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea HOM05D004981 ORTHO05D005635 8.2e-64 248.4 424 46.7
Atru.chr5.2124 Acer truncatum HOM05D004981 ORTHO05D005635 1.1e-63 248.1 423 45.2
Phvul.006G206700 Phaseolus vulgaris HOM05D004981 ORTHO05D005635 1.1e-63 248.1 390 48.2
Gohir.D13G054600 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.8e-63 247.3 427 45.7
Ciclev10025761m.g Citrus clementina HOM05D004981 ORTHO05D005635 3.1e-63 246.5 408 47.1
Gorai.013G061400 Gossypium raimondii HOM05D004981 ORTHO05D005635 9.1e-63 245.0 427 45.7
Thecc.02G139100 Theobroma cacao HOM05D004981 ORTHO05D005635 9.1e-63 245.0 424 45.0
Gohir.A03G173700 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.5e-62 244.2 404 43.6
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 2.0e-62 243.8 391 43.5
Cc02_g21590 Coffea canephora HOM05D004981 ORTHO05D005635 1.7e-61 240.7 417 45.6
Gorai.005G219800 Gossypium raimondii HOM05D004981 ORTHO05D005635 1.7e-61 240.7 421 44.2
Gohir.A13G067000 Gossypium hirsutum HOM05D004981 ORTHO05D005635 3.8e-61 239.6 427 45.2
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 5.0e-61 239.2 411 44.5
Gohir.D02G196800 Gossypium hirsutum HOM05D004981 ORTHO05D005635 6.5e-61 238.8 421 44.2
TPR.G9514 Trifolium pratense HOM05D004981 ORTHO05D005635 6.5e-61 238.8 321 53.3
PSO541G0435 Papaver somniferum HOM05D004981 ORTHO05D005635 8.5e-61 238.4 386 47.9
Psat1g216680 Pisum sativum HOM05D004981 ORTHO05D005635 1.5e-60 237.7 329 48.3
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 9.4e-60 235.0 416 46.6
CiPaw.06G153000 Carya illinoinensis HOM05D004981 ORTHO05D005635 9.4e-60 235.0 260 56.2
ClCG09G015370 Citrullus lanatus HOM05D004981 ORTHO05D005635 1.2e-59 234.6 422 44.8
Lj5A239G83 Lonicera japonica HOM05D004981 ORTHO05D005635 1.2e-59 234.6 258 56.2
ATR0753G166 Amborella trichopoda HOM05D004981 ORTHO05D005635 1.4e-58 231.1 436 43.6
SGA_v2.0_scaffold83G26298 Striga asiatica HOM05D004981 ORTHO05D005635 6.7e-58 228.8 424 41.5
Potri.001G205700 Populus trichocarpa HOM05D004981 ORTHO05D005635 1.1e-57 228.0 424 41.7
Potri.003G023700 Populus trichocarpa HOM05D004981 ORTHO05D005635 1.1e-57 228.0 404 44.6
AUR62010122 Chenopodium quinoa HOM05D004981 ORTHO05D005635 2.6e-57 226.9 354 48.9
Duzib248G0633 Durio zibethinus HOM05D004981 ORTHO05D005635 2.6e-57 226.9 371 42.9
Sopen04g004240 Solanum pennellii HOM05D004981 ORTHO05D005635 5.7e-57 225.7 421 44.2
CAN.G274.6 Capsicum annuum HOM05D004981 ORTHO05D005635 7.4e-57 225.3 395 45.1
Lalb_Chr20g0123041 Lupinus albus HOM05D004981 ORTHO05D005635 7.4e-57 225.3 400 46.8
Rhsim05G0107500 Rhododendron simsii HOM05D004981 ORTHO05D005635 1.3e-56 224.6 455 41.1
Solyc04g009060.4 Solanum lycopersicum HOM05D004981 ORTHO05D005635 1.3e-56 224.6 421 43.9
PGSC0003DMG400011507 Solanum tuberosum HOM05D004981 ORTHO05D005635 8.2e-56 221.9 403 44.7
Rhsim05G0107600 Rhododendron simsii HOM05D004981 ORTHO05D005635 2.4e-55 220.3 457 40.7
Prupe.8G061500 Prunus persica HOM05D004981 ORTHO05D005635 7.0e-55 218.8 261 52.1
Aa31LG3G17630 Aethionema arabicum HOM05D004981 ORTHO05D005635 2.0e-54 217.2 377 46.7
Cpa.g.sc49.24 Carica papaya HOM05D004981 ORTHO05D005635 3.5e-54 216.5 314 44.6
HanXRQChr16g0514321 Helianthus annuus HOM05D004981 ORTHO05D005635 4.5e-54 216.1 381 45.7
THA.LOC104818438 Tarenaya hassleriana HOM05D004981 ORTHO05D005635 7.7e-54 215.3 414 43.0
Migut.B00612 Erythranthe guttata HOM05D004981 ORTHO05D005635 1.0e-53 214.9 380 46.6
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla HOM05D004981 ORTHO05D005635 1.0e-53 214.9 353 46.5
Eucgr.I02666 Eucalyptus grandis HOM05D004981 ORTHO05D005635 1.1e-52 211.5 258 53.9
DCAR_021855 Daucus carota HOM05D004981 ORTHO05D005635 1.5e-52 211.1 363 42.1
EL10Ac9g21471 Beta vulgaris HOM05D004981 ORTHO05D005635 5.5e-52 209.1 320 49.4
COL.COLO4_24958 Corchorus olitorius HOM05D004981 ORTHO05D005635 1.4e-50 204.5 274 48.5
Nitab4.5_0008051g0010 Nicotiana tabacum HOM05D004981 ORTHO05D005635 1.4e-50 204.5 320 45.6
SalBow5G0436 Salvia bowleyana HOM05D004981 ORTHO05D005635 2.3e-50 203.8 364 45.1
Sc20g0002060 Simmondsia chinensis HOM05D004981 ORTHO05D005635 3.0e-50 203.4 252 51.6
Dinv09034 Davidia involucrata HOM05D004981 ORTHO05D005635 3.4e-49 199.9 254 50.0
FAN18G1425 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.4e-49 199.9 405 41.0
Zm00001eb311320 Zea mays HOM05D004981 ORTHO05D005635 3.4e-49 199.9 407 40.0
HPP92_013108 Vanilla planifolia HOM05D004981 ORTHO05D005635 4.4e-49 199.5 235 51.9
Oeu047361.1 Olea europaea HOM05D004981 ORTHO05D005635 9.8e-49 198.4 378 39.9
MSTRG.20297 Avicennia marina HOM05D004981 ORTHO05D005635 1.3e-48 198.0 255 49.0
SEGI_39436 Sequoiadendron giganteum HOM05D004981 ORTHO05D005635 2.2e-48 197.2 324 44.1
MD14G1166200 Malus domestica HOM05D004981 ORTHO05D005635 3.7e-48 196.4 381 43.8
Peaxi162Scf00152g01024 Petunia axillaris HOM05D004981 ORTHO05D005635 6.3e-48 195.7 349 41.8
Sp6g33940 Schrenkiella parvula HOM05D004981 ORTHO05D005635 1.1e-47 194.9 377 43.5
TPR.G21754 Trifolium pratense HOM05D004981 ORTHO05D005635 1.1e-47 194.9 233 52.4
Prupe.5G160300 Prunus persica HOM05D004981 ORTHO05D005635 1.4e-47 194.5 387 43.9
AUR62013118 Chenopodium quinoa HOM05D004981 ORTHO05D005635 1.8e-47 194.1 420 39.5
Os09g0372400 Oryza sativa ssp. japonica HOM05D004981 ORTHO05D005635 4.1e-47 193.0 323 46.1
FAN04G0403 Fragaria x ananassa HOM05D004981 ORTHO05D005635 5.4e-47 192.6 387 42.9
Lsat_1_v5_gn_5_107300 Lactuca sativa HOM05D004981 ORTHO05D005635 7.0e-47 192.2 407 41.5
RcHm_v2.0_Chr7g0191681 Rosa chinensis HOM05D004981 ORTHO05D005635 7.0e-47 192.2 384 42.2
ECA234G4021 Erigeron canadensis HOM05D004981 ORTHO05D005635 1.6e-46 191.0 391 43.0
A10p27880 Brassica napus HOM05D004981 ORTHO05D005635 4.5e-46 189.5 372 43.5
BraA10t44837Z Brassica rapa HOM05D004981 ORTHO05D005635 1.0e-45 188.3 372 44.1
Hund00058 Selenicereus undatus HOM05D004981 ORTHO05D005635 1.0e-45 188.3 350 41.7
FvH4_5g07000 Fragaria vesca HOM05D004981 ORTHO05D005635 3.8e-45 186.4 392 40.8
FAN08G0200 Fragaria x ananassa HOM05D004981 ORTHO05D005635 5.0e-45 186.0 392 41.1
Sabra01G0158000 Salix brachista HOM05D004981 ORTHO05D005635 1.1e-44 184.9 430 37.2
Sabra03G0014800 Salix brachista HOM05D004981 ORTHO05D005635 1.5e-44 184.5 232 51.3
Mapoly0041s0053 Marchantia polymorpha HOM05D004981 ORTHO05D005635 1.9e-44 184.1 394 41.6
HPP92_013085 Vanilla planifolia HOM05D004981 ORTHO05D005635 6.1e-43 179.1 293 41.0
C09p67980 Brassica napus HOM05D004981 ORTHO05D005635 1.4e-42 177.9 356 44.1
Medtr5g017190 Medicago truncatula HOM05D004981 ORTHO05D005635 2.3e-42 177.2 237 49.4
BolC9t59557H Brassica oleracea HOM05D004981 ORTHO05D005635 4.0e-42 176.4 356 44.7
Thhalv10013574m.g Eutrema salsugineum HOM05D004981 ORTHO05D005635 1.5e-41 174.5 381 42.0
BcaB08g37209 Brassica carinata HOM05D004981 ORTHO05D005635 2.6e-41 173.7 339 43.7
AT5G09390 Arabidopsis thaliana HOM05D004981 ORTHO05D005635 3.4e-41 173.3 368 42.9
AL6G19780 Arabidopsis lyrata HOM05D004981 ORTHO05D005635 5.7e-41 172.6 378 41.3
Carub.0006s0794 Capsella rubella HOM05D004981 ORTHO05D005635 2.2e-40 170.6 375 41.6
CARHR204020 Cardamine hirsuta HOM05D004981 ORTHO05D005635 2.2e-40 170.6 345 41.2
vmacro19928 Vaccinium macrocarpon HOM05D004981 ORTHO05D005635 1.8e-39 167.5 523 36.1
Lj1g0016172 Lotus japonicus HOM05D004981 ORTHO05D005635 2.4e-39 167.2 315 39.4
Nitab4.5_0000480g0020 Nicotiana tabacum HOM05D004981 ORTHO05D005635 4.1e-39 166.4 292 39.4
Pp3c22_4170 Physcomitrium patens HOM05D004981 ORTHO05D005635 7.0e-39 165.6 401 38.7
Oeu011769.5 Olea europaea HOM05D004981 ORTHO05D005635 9.1e-39 165.2 379 36.9
SMO356G0631 Selaginella moellendorffii HOM05D004981 ORTHO05D005635 1.1e-36 158.3 337 41.5
COL.COLO4_15286 Corchorus olitorius HOM05D004981 ORTHO05D005635 4.7e-35 152.9 259 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis HOM05D004981 ORTHO05D005635 2.0e-33 147.5 240 42.9
CBR_g31506 Chara braunii HOM05D004981 ORTHO05D005635 2.0e-33 147.5 264 38.3
FAN08G2142 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.2e-27 128.3 379 37.7
Ah.01g009580 Amaranthus hybridus HOM05D004981 ORTHO05D005635 1.9e-23 114.4 263 36.1
FAN21G1455 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.1e-18 97.1 372 34.7
Ah.01g009610 Amaranthus hybridus HOM05D004981 ORTHO05D005635 2.0e-17 94.4 165 46.1
VMungo1383G1991 Vigna mungo HOM05D004981 ORTHO05D005635 5.8e-17 92.8 136 46.3
Thecc.06G050700 Theobroma cacao HOM05D004981 ORTHO05D005635 1.0e-13 82.0 85 51.8
PRCOL_00000241 Prasinoderma coloniale HOM05D004981 ORTHO05D005635 1.5e-12 78.2 227 27.8
C05p07220 Brassica napus HOM05D001624 ORTHO05D005635 6.8e-10 69.3 103 41.7
FvH4_4g13240 Fragaria vesca HOM05D004981 ORTHO05D005635 1.7e-08 64.7 125 41.6
RcHm_v2.0_Chr7g0224681 Rosa chinensis HOM05D004981 ORTHO05D005635 1.4e-07 61.6 133 36.8
Cre06.g299450 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 1.9e-07 61.2 169 32.5
FAN12G0625 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.2e-07 60.5 74 50.0
Cre04.g221350 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 7.1e-07 59.3 213 30.5
Lsat_1_v5_gn_5_82561 Lactuca sativa HOM05D004981 ORTHO05D005635 1.2e-06 58.5 62 58.1
FAN17G2803 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.7e-06 57.4 136 36.8


User provided reference genes

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