Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 2.4e-71 272.3 162 100.0
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 7.2e-20 101.3 159 41.5
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 4.8e-16 88.6 154 39.6
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 1.6e-14 83.6 164 50.0
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.0e-13 80.9 156 45.5
CDE05G1898 Ceratophyllum demersum HOM05D000157 ORTHO05D000691 1.5e-12 77.0 130 40.8
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 9.5e-12 74.3 135 37.0
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 9.5e-12 74.3 135 37.0
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 2.1e-11 73.2 133 37.6
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 2.1e-11 73.2 160 40.0
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 3.6e-11 72.4 152 46.7
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 3.6e-11 72.4 135 35.6
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 6.1e-11 71.6 139 50.4
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 8.0e-11 71.2 147 34.7
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.0e-10 70.9 165 35.2
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 1.4e-10 70.5 149 38.3
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 1.4e-10 70.5 159 33.3
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 1.4e-10 70.5 148 44.6
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 1.8e-10 70.1 135 35.6
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 2.3e-10 69.7 139 40.3
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 2.3e-10 69.7 153 35.3
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 3.0e-10 69.3 141 35.5
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 4.0e-10 68.9 153 49.7
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 5.2e-10 68.6 163 34.4
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 8.8e-10 67.8 163 34.4
PSO447G0267 Papaver somniferum HOM05D055938 ORTHO05D050202 1.2e-09 67.4 167 44.3
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 2.6e-09 66.2 160 39.4
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 2.6e-09 66.2 160 39.4
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 2.6e-09 66.2 135 40.0
Manes.13G096700 Manihot esculenta HOM05D008176 ORTHO05D004477 4.4e-09 65.5 137 39.4
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 5.7e-09 65.1 133 43.6
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 7.5e-09 64.7 145 33.8
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 9.8e-09 64.3 137 33.6
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 1.3e-08 63.9 142 33.8
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 1.3e-08 63.9 155 33.5
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 1.7e-08 63.5 140 35.7
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 1.7e-08 63.5 163 41.7
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 1.7e-08 63.5 161 45.3
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 2.2e-08 63.2 162 31.5
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 2.8e-08 62.8 136 36.8
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 3.7e-08 62.4 160 31.9
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 4.9e-08 62.0 143 39.9
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 6.3e-08 61.6 162 39.5
Sc26g0000200 Simmondsia chinensis HOM05D013332 ORTHO05D004477 6.3e-08 61.6 167 34.1
FAN26G3011 Fragaria x ananassa HOM05D013332 ORTHO05D004477 8.3e-08 61.2 180 37.8
Glyma.04G099200 Glycine max HOM05D008046 ORTHO05D004477 8.3e-08 61.2 153 38.6
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 1.1e-07 60.8 133 40.6
PSO700G0164 Papaver somniferum HOM05D055938 ORTHO05D050202 1.1e-07 60.8 166 36.1
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 1.1e-07 60.8 139 40.3
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 1.1e-07 60.8 140 36.4
CANSAT01G0943 Cannabis sativa HOM05D013332 ORTHO05D004477 1.4e-07 60.5 157 41.4
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 1.4e-07 60.5 168 38.1
CSS0043643 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.4e-07 59.7 137 36.5
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.4e-07 59.7 127 44.1
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.4e-07 59.7 140 32.1
Gohir.A11G051100 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.4e-07 59.7 168 36.9
FvH4_1g20240 Fragaria vesca HOM05D013332 ORTHO05D004477 3.1e-07 59.3 180 40.0
FAN23G0907 Fragaria x ananassa HOM05D013332 ORTHO05D004477 3.1e-07 59.3 171 34.5
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 4.1e-07 58.9 127 44.1
Eucgr.B00040 Eucalyptus grandis HOM05D008046 ORTHO05D004477 4.1e-07 58.9 134 44.0
FAN28G1274 Fragaria x ananassa HOM05D013332 ORTHO05D004477 4.1e-07 58.9 171 38.0
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 4.1e-07 58.9 140 48.6
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 5.4e-07 58.5 151 41.7
FAN19G2695 Fragaria x ananassa HOM05D013332 ORTHO05D004477 7.0e-07 58.2 180 38.3
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 7.0e-07 58.2 176 40.3
RcHm_v2.0_Chr2g0112381 Rosa chinensis HOM05D013332 ORTHO05D004477 7.0e-07 58.2 169 34.3
Sc03g0000170 Simmondsia chinensis HOM05D031888 ORTHO05D004477 7.0e-07 58.2 181 29.3
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 9.2e-07 57.8 155 33.5
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 9.2e-07 57.8 144 34.0
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 1.2e-06 57.4 161 36.0
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 1.2e-06 57.4 148 43.2
Cfa002600 Carpinus fangiana HOM05D008176 ORTHO05D004477 1.6e-06 57.0 137 46.0
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 1.6e-06 57.0 140 39.3
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 2.0e-06 56.6 138 37.7
Gohir.D11G054500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.0e-06 56.6 172 36.6
Potri.007G097000 Populus trichocarpa HOM05D008176 ORTHO05D004477 2.0e-06 56.6 159 37.1
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 2.0e-06 56.6 167 41.9
CSS0015684 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.7e-06 56.2 137 45.3
Gohir.A01G132600 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.7e-06 56.2 133 33.1
Manes.18G064000 Manihot esculenta HOM05D008046 ORTHO05D004477 2.7e-06 56.2 42 66.7
Sopen05g029880 Solanum pennellii HOM05D008176 ORTHO05D004477 2.7e-06 56.2 137 33.6
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 3.5e-06 55.8 138 30.4
TWI53G0271 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 3.5e-06 55.8 155 32.3
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 4.5e-06 55.5 138 29.7
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 4.5e-06 55.5 147 32.0
Sp1g19950 Schrenkiella parvula HOM05D009138 ORTHO05D011294 4.5e-06 55.5 68 48.5
SGA_v2.0_scaffold108G30894 Striga asiatica HOM05D008176 ORTHO05D004477 5.9e-06 55.1 145 30.3
VMungo0647G1155 Vigna mungo HOM05D008046 ORTHO05D004477 5.9e-06 55.1 40 65.0
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 7.7e-06 54.7 137 32.1


User provided reference genes

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