Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00570 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 7.6e-146 520.4 246 100.0
Aqoxy3G02801 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 1.6e-111 406.4 200 98.0
TAR629G2248 Trochodendron aralioides HOM05D002866 ORTHO05D008929 1.6e-90 336.7 204 81.4
Nn6g33860 Nelumbo nucifera HOM05D002866 ORTHO05D008929 2.6e-90 335.9 203 80.3
Cfa013559 Carpinus fangiana HOM05D002866 ORTHO05D008929 1.0e-89 334.0 200 80.5
GSVIVG01013991001 Vitis vinifera HOM05D002866 ORTHO05D008929 5.0e-89 331.6 200 78.5
QL05p021044 Quercus lobata HOM05D002866 ORTHO05D008929 6.5e-89 331.3 199 78.9
QL05p020902 Quercus lobata HOM05D002866 ORTHO05D008929 1.9e-88 329.7 199 78.4
FAN03G0702 Fragaria x ananassa HOM05D002866 ORTHO05D008929 4.2e-88 328.6 200 80.5
Atru.chr1.858_Atru.chr1.859 Acer truncatum HOM05D002866 ORTHO05D008929 7.2e-88 327.8 200 78.0
Lj1A976T81 Lonicera japonica HOM05D002866 ORTHO05D008929 1.6e-87 326.6 199 79.4
RcHm_v2.0_Chr1g0373871 Rosa chinensis HOM05D002866 ORTHO05D008929 1.6e-87 326.6 200 80.0
Haze_22179 Corylus avellana HOM05D002866 ORTHO05D000055 2.1e-87 326.2 200 80.0
FvH4_7g27050 Fragaria vesca HOM05D002866 ORTHO05D008929 2.7e-87 325.9 200 80.0
MD07G1250300 Malus domestica HOM05D002866 ORTHO05D008929 3.6e-87 325.5 199 78.9
Sed0016729 Sechium edule HOM05D002866 ORTHO05D008929 4.7e-87 325.1 199 76.9
Cpa.g.sc13.272 Carica papaya HOM05D002866 ORTHO05D008929 8.0e-87 324.3 200 78.5
FAN10G2637 Fragaria x ananassa HOM05D002866 ORTHO05D008929 1.0e-86 323.9 200 79.5
Manes.06G132400 Manihot esculenta HOM05D002866 ORTHO05D008929 1.4e-86 323.6 216 73.1
Duzib084G0424 Durio zibethinus HOM05D002866 ORTHO05D008929 8.8e-86 320.9 205 75.6
Prupe.2G273700 Prunus persica HOM05D002866 ORTHO05D008929 8.8e-86 320.9 200 76.5
Thecc.03G150200 Theobroma cacao HOM05D002866 ORTHO05D008929 1.5e-85 320.1 205 75.6
Potri.014G191900 Populus trichocarpa HOM05D002866 ORTHO05D008929 2.0e-85 319.7 200 77.0
Actinidia24979 Actinidia chinensis HOM05D002866 ORTHO05D008929 2.6e-85 319.3 200 77.0
CSS0005256 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 2.6e-85 319.3 199 77.9
CSS0048324 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 2.6e-85 319.3 199 77.9
CiPaw.07G051200 Carya illinoinensis HOM05D002866 ORTHO05D008929 3.3e-85 318.9 200 77.5
CANSAT56G0775 Cannabis sativa HOM05D002866 ORTHO05D008929 4.4e-85 318.5 201 77.6
Lalb_Chr15g0079681 Lupinus albus HOM05D002866 ORTHO05D008929 5.7e-85 318.2 200 78.5
Oeu021694.1 Olea europaea HOM05D002866 ORTHO05D008929 1.7e-84 316.6 213 74.2
Hund11848 Selenicereus undatus HOM05D002866 ORTHO05D008929 8.2e-84 314.3 200 76.0
PGR042G0411 Punica granatum HOM05D002866 ORTHO05D008929 1.1e-83 313.9 200 77.5
Glyma.06G317300 Glycine max HOM05D002866 ORTHO05D008929 1.4e-83 313.5 201 79.1
Hund11850 Selenicereus undatus HOM05D002866 ORTHO05D008929 1.4e-83 313.5 200 75.5
Ca_14047_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008929 3.1e-83 312.4 199 77.9
Ciclev10005302m.g Citrus clementina HOM05D002866 ORTHO05D008929 3.1e-83 312.4 200 75.0
MBI04_g34103_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008929 4.1e-83 312.0 209 75.1
Medtr3g008180 Medicago truncatula HOM05D002866 ORTHO05D008929 5.3e-83 311.6 199 77.9
Actinidia13601 Actinidia chinensis HOM05D002866 ORTHO05D008929 7.0e-83 311.2 200 75.5
SalBow2G0523 Salvia bowleyana HOM05D002866 ORTHO05D008929 9.1e-83 310.8 200 77.0
COL.COLO4_14062 Corchorus olitorius HOM05D002866 ORTHO05D008929 1.2e-82 310.5 206 74.8
VMungo1080G1351 Vigna mungo HOM05D002866 ORTHO05D008929 1.2e-82 310.5 219 74.0
CsaV3_4G004140 Cucumis sativus L. HOM05D002866 ORTHO05D008929 2.0e-82 309.7 199 75.9
PSO063G6150 Papaver somniferum HOM05D002866 ORTHO05D008929 2.0e-82 309.7 202 75.2
Rhsim03G0162900 Rhododendron simsii HOM05D002866 ORTHO05D008929 2.0e-82 309.7 200 75.5
Lj3g0001933 Lotus japonicus HOM05D002866 ORTHO05D008929 4.5e-82 308.5 199 77.4
FAN06G4646 Fragaria x ananassa HOM05D002866 ORTHO05D008929 1.7e-81 306.6 235 68.1
Gorai.008G214900 Gossypium raimondii HOM05D002866 ORTHO05D008929 1.7e-81 306.6 205 72.7
Phvul.005G009200 Phaseolus vulgaris HOM05D002866 ORTHO05D008929 1.7e-81 306.6 202 77.7
Psat5g228760 Pisum sativum HOM05D002866 ORTHO05D008929 1.7e-81 306.6 201 75.6
EL10Ac3g05868 Beta vulgaris HOM05D002866 ORTHO05D008929 2.2e-81 306.2 202 73.8
Sabra14G0144000 Salix brachista HOM05D002866 ORTHO05D008929 2.2e-81 306.2 200 75.0
Gohir.A12G197100 Gossypium hirsutum HOM05D002866 ORTHO05D008929 2.9e-81 305.8 205 72.7
Sc13g0007920 Simmondsia chinensis HOM05D002866 ORTHO05D008929 2.9e-81 305.8 199 74.9
AUR62002233 Chenopodium quinoa HOM05D002866 ORTHO05D008929 3.8e-81 305.4 201 74.6
Cc02_g04590 Coffea canephora HOM05D002866 ORTHO05D008929 6.5e-81 304.7 204 72.1
Gohir.D12G199700 Gossypium hirsutum HOM05D002866 ORTHO05D008929 1.1e-80 303.9 205 71.7
TPR.G12157 Trifolium pratense HOM05D002866 ORTHO05D008929 1.1e-80 303.9 199 75.9
Eucgr.A02913 Eucalyptus grandis HOM05D002866 ORTHO05D008929 1.5e-80 303.5 200 75.5
Lsat_1_v5_gn_2_127761 Lactuca sativa HOM05D002866 ORTHO05D008929 1.9e-80 303.1 200 73.5
AUR62015445 Chenopodium quinoa HOM05D002866 ORTHO05D008929 4.2e-80 302.0 200 73.0
Nitab4.5_0002346g0020 Nicotiana tabacum HOM05D002866 ORTHO05D008929 4.2e-80 302.0 200 74.5
ECA238G1321 Erigeron canadensis HOM05D002866 ORTHO05D008929 7.2e-80 301.2 200 74.0
arahy.Tifrunner.gnm1.ann1.DW86GH Arachis hypogaea HOM05D002866 ORTHO05D008929 9.4e-80 300.8 200 74.5
HanXRQChr14g0461261 Helianthus annuus HOM05D002866 ORTHO05D008929 9.4e-80 300.8 198 73.2
vmacro22348 Vaccinium macrocarpon HOM05D002866 ORTHO05D008929 2.7e-79 299.3 200 73.0
Ah.07g207570 Amaranthus hybridus HOM05D002866 ORTHO05D008929 2.3e-78 296.2 222 67.1
TWI14G1303 Tripterygium wilfordii HOM05D002866 ORTHO05D008929 2.3e-78 296.2 200 73.0
PGSC0003DMG400018851 Solanum tuberosum HOM05D002866 ORTHO05D008929 2.0e-77 293.1 199 72.4
CARHR275310 Cardamine hirsuta HOM05D002866 ORTHO05D008929 3.4e-77 292.4 218 68.8
Peaxi162Scf00271g00827 Petunia axillaris HOM05D002866 ORTHO05D008929 3.4e-77 292.4 199 72.9
Solyc03g093440.4 Solanum lycopersicum HOM05D002866 ORTHO05D008929 4.4e-77 292.0 199 72.4
Sp2g24740 Schrenkiella parvula HOM05D002866 ORTHO05D008929 7.5e-77 291.2 200 73.0
HPP92_027439 Vanilla planifolia HOM05D002866 ORTHO05D008929 7.5e-77 291.2 213 69.5
Sopen03g024270 Solanum pennellii HOM05D002866 ORTHO05D008929 1.3e-76 290.4 199 71.4
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.7e-76 290.0 200 73.5
BraA03t13840Z Brassica rapa HOM05D002866 ORTHO05D008929 1.7e-76 290.0 200 73.5
THA.LOC104818311 Tarenaya hassleriana HOM05D002866 ORTHO05D008929 1.7e-76 290.0 200 73.0
AT5G61540 Arabidopsis thaliana HOM05D002866 ORTHO05D008929 2.2e-76 289.7 200 72.0
Carub.0008s2223 Capsella rubella HOM05D002866 ORTHO05D008929 2.2e-76 289.7 200 72.5
Migut.F01192 Erythranthe guttata HOM05D002866 ORTHO05D008929 6.3e-76 288.1 200 73.0
HPP92_021029 Vanilla planifolia HOM05D002866 ORTHO05D008929 8.3e-76 287.7 213 68.5
AL8G38240 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 1.4e-75 287.0 203 70.9
Thhalv10004474m.g Eutrema salsugineum HOM05D002866 ORTHO05D008929 1.4e-75 287.0 198 73.7
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 1.8e-75 286.6 200 73.0
CAN.G485.17 Capsicum annuum HOM05D002866 ORTHO05D008929 3.1e-75 285.8 199 69.3
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 5.4e-75 285.0 200 72.5
Os04g0549300 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008929 9.1e-75 284.3 217 67.3
Zm00001eb074820 Zea mays HOM05D002866 ORTHO05D008929 5.0e-73 278.5 199 70.9
unitig_60.g25662 Utricularia gibba HOM05D002866 ORTHO05D008929 9.4e-72 274.2 230 61.3
CDE11G0041 Ceratophyllum demersum HOM05D002866 ORTHO05D008929 1.3e-68 263.8 183 71.6
ATR0767G136 Amborella trichopoda HOM05D002866 ORTHO05D008929 1.8e-67 260.0 195 66.7
Mapoly0043s0091 Marchantia polymorpha HOM05D002866 ORTHO05D008929 1.6e-66 256.9 209 62.7
Nitab4.5_0001267g0010 Nicotiana tabacum HOM05D002866 ORTHO05D008929 2.0e-66 256.5 200 66.5
ATR0057G117 Amborella trichopoda HOM05D002866 ORTHO05D008929 2.5e-64 249.6 200 64.0
SGA_v2.0_scaffold56G19920 Striga asiatica HOM05D002866 ORTHO05D008929 4.7e-63 245.4 211 62.1
AagrBONN_evm.TU.Sc2ySwM_228.4013 Anthoceros agrestis HOM05D002866 ORTHO05D008929 2.3e-62 243.0 201 62.7
SMO115G0123 Selaginella moellendorffii HOM05D002866 ORTHO05D008929 4.0e-62 242.3 202 62.4
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 9.8e-61 237.7 201 62.2
CBR_g51802 Chara braunii HOM05D002866 ORTHO05D000301 2.7e-58 229.6 232 53.4
ClCG07G016910 Citrullus lanatus HOM05D002866 ORTHO05D008929 1.1e-56 224.2 154 70.8
Pp3c27_3290 Physcomitrium patens HOM05D002866 ORTHO05D008929 4.1e-51 205.7 224 50.4
Aa31LG11G1880 Aethionema arabicum HOM05D002866 ORTHO05D008929 2.5e-48 196.4 200 54.5
SEGI_24637 Sequoiadendron giganteum HOM05D002866 ORTHO05D008929 1.2e-47 194.1 159 61.6
SEGI_35611 Sequoiadendron giganteum HOM05D002866 ORTHO05D008929 1.2e-47 194.1 159 61.6
Haze_26420 Corylus avellana HOM05D002866 ORTHO05D008929 1.1e-43 181.0 197 49.2
MELO3C017653.2 Cucumis melo HOM05D002866 ORTHO05D008929 5.6e-40 168.7 119 68.9
PRCOL_00000617 Prasinoderma coloniale HOM05D002866 ORTHO05D008929 4.7e-39 165.6 204 43.6
Glyma.14G148200 Glycine max HOM05D002866 ORTHO05D008929 2.9e-36 156.4 100 75.0
Gohir.A06G021400 Gossypium hirsutum HOM05D002101 ORTHO05D002126 1.0e-09 68.2 178 30.9
Gohir.D06G019081 Gossypium hirsutum HOM05D002101 ORTHO05D002126 1.3e-09 67.8 176 30.1
Gorai.010G023000 Gossypium raimondii HOM05D002101 ORTHO05D002126 1.3e-09 67.8 176 30.1
CDE07G1953 Ceratophyllum demersum HOM05D002101 ORTHO05D002126 1.1e-08 64.7 195 29.2
Psat4g046120 Pisum sativum HOM05D002101 ORTHO05D002126 1.1e-08 64.7 191 27.7
VMungo1215G0661 Vigna mungo HOM05D002101 ORTHO05D002126 1.1e-08 64.7 215 26.5
Hund05329 Selenicereus undatus HOM05D002101 ORTHO05D002126 1.5e-08 64.3 190 27.4
Psat7g193440 Pisum sativum HOM05D002101 ORTHO05D002126 5.6e-08 62.4 182 29.1
ATR0827G117 Amborella trichopoda HOM05D002101 ORTHO05D002126 7.4e-08 62.0 195 29.7
Rhsim08G0141600 Rhododendron simsii HOM05D002101 ORTHO05D002126 7.4e-08 62.0 183 28.4
Hund09953 Selenicereus undatus HOM05D002101 ORTHO05D002126 7.4e-08 62.0 182 26.9
Migut.D01617 Erythranthe guttata HOM05D002101 ORTHO05D002126 9.6e-08 61.6 188 26.6
EL10Ac1g00526 Beta vulgaris HOM05D004612 ORTHO05D004940 1.6e-07 60.8 208 29.8
Ah.11g047450 Amaranthus hybridus HOM05D002101 ORTHO05D002126 2.1e-07 60.5 188 27.7
Actinidia10445 Actinidia chinensis HOM05D002101 ORTHO05D002126 2.8e-07 60.1 183 27.9
AUR62032135 Chenopodium quinoa HOM05D002101 ORTHO05D002126 2.8e-07 60.1 188 27.1
PGR083G1612 Punica granatum HOM05D002101 ORTHO05D002126 4.8e-07 59.3 183 30.1
unitig_578.g15935 Utricularia gibba HOM05D002101 ORTHO05D002126 6.2e-07 58.9 176 29.0
CSS0012895 Camellia sinensis var. sinensis HOM05D002101 ORTHO05D002126 8.1e-07 58.5 183 29.0
AUR62039670 Chenopodium quinoa HOM05D002101 ORTHO05D002126 1.1e-06 58.2 188 26.6
VMungo1309G3060 Vigna mungo HOM05D002101 ORTHO05D002126 1.1e-06 58.2 206 26.7
CSS0018562 Camellia sinensis var. sinensis HOM05D002101 ORTHO05D002126 1.4e-06 57.8 183 29.0
MBI19_g42661_MAGBIO Magnolia biondii HOM05D002101 ORTHO05D002126 1.4e-06 57.8 195 27.2
CDE06G1515 Ceratophyllum demersum HOM05D002101 ORTHO05D002126 1.8e-06 57.4 112 33.9
Ah.02g114210 Amaranthus hybridus HOM05D002101 ORTHO05D002126 3.1e-06 56.6 197 28.9
Prupe.5G209200 Prunus persica HOM05D002101 ORTHO05D002126 3.1e-06 56.6 191 27.2
Prupe.5G209700 Prunus persica HOM05D002101 ORTHO05D002126 3.1e-06 56.6 191 27.2
arahy.Tifrunner.gnm1.ann1.I7FZVG Arachis hypogaea HOM05D002101 ORTHO05D002126 4.0e-06 56.2 182 26.4
HPP92_004764 Vanilla planifolia HOM05D002101 ORTHO05D002126 4.0e-06 56.2 196 26.0
arahy.Tifrunner.gnm1.ann1.H2CSA7 Arachis hypogaea HOM05D002101 ORTHO05D002126 5.3e-06 55.8 182 24.7
CSS0013573 Camellia sinensis var. sinensis HOM05D002101 ORTHO05D002126 5.3e-06 55.8 183 28.4
CSS0028325 Camellia sinensis var. sinensis HOM05D002101 ORTHO05D002126 5.3e-06 55.8 183 28.4
AagrBONN_evm.TU.Sc2ySwM_117.3587 Anthoceros agrestis HOM05D002101 ORTHO05D002126 9.0e-06 55.1 189 27.0
Dinv07971 Davidia involucrata HOM05D002101 ORTHO05D002126 9.0e-06 55.1 182 27.5


User provided reference genes

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