Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 2.5e-147 525.4 257 100.0
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 1.3e-132 476.5 257 88.3
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 5.0e-132 474.6 257 88.3
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 1.1e-131 473.4 257 88.7
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 3.2e-131 471.9 257 87.5
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 2.7e-130 468.8 256 86.7
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 3.6e-130 468.4 257 86.8
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 3.6e-130 468.4 257 86.8
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 7.9e-130 467.2 257 87.9
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 1.4e-129 466.5 256 87.5
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 1.4e-129 466.5 257 87.9
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 1.4e-129 466.5 256 88.3
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.3e-129 465.7 256 87.1
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.3e-129 465.7 256 87.1
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 2.3e-129 465.7 257 85.6
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 3.0e-129 465.3 257 87.2
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 3.0e-129 465.3 256 87.9
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 5.2e-129 464.5 257 87.2
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 8.8e-129 463.8 257 87.2
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 8.8e-129 463.8 255 86.7
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.1e-128 463.4 257 87.2
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.5e-128 463.0 257 85.2
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 2.0e-128 462.6 257 87.2
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 2.6e-128 462.2 254 87.4
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 3.3e-128 461.8 255 86.7
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 3.3e-128 461.8 257 87.9
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 3.3e-128 461.8 257 87.9
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 3.3e-128 461.8 256 87.1
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 5.7e-128 461.1 257 86.8
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 5.7e-128 461.1 257 86.0
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 7.4e-128 460.7 258 85.7
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 7.4e-128 460.7 254 87.4
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 9.7e-128 460.3 257 86.8
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 1.7e-127 459.5 257 86.4
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 1.7e-127 459.5 257 86.4
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 2.2e-127 459.1 257 86.8
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 3.7e-127 458.4 257 86.8
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 4.8e-127 458.0 257 85.6
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 1.1e-126 456.8 257 86.4
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 2.4e-126 455.7 257 84.8
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 3.1e-126 455.3 257 84.8
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 4.1e-126 454.9 257 86.0
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 5.3e-126 454.5 257 85.2
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 9.1e-126 453.8 257 84.4
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 1.6e-125 453.0 257 84.0
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 1.6e-125 453.0 257 84.0
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 2.0e-125 452.6 257 83.7
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 2.6e-125 452.2 256 86.3
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 3.5e-125 451.8 257 86.0
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 7.7e-125 450.7 257 84.4
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 7.7e-125 450.7 257 84.4
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 1.3e-124 449.9 257 85.2
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 1.3e-124 449.9 257 83.7
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 1.7e-124 449.5 258 84.1
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 3.8e-124 448.4 254 83.1
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 1.1e-123 446.8 257 83.3
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.5e-123 446.4 257 84.4
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 3.2e-123 445.3 263 82.1
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 7.2e-123 444.1 257 82.5
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 9.4e-123 443.7 257 83.7
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 9.4e-123 443.7 271 79.7
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.6e-122 443.0 265 81.9
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 2.1e-122 442.6 271 79.3
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 2.1e-122 442.6 257 84.4
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 2.1e-122 442.6 257 84.4
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 2.1e-122 442.6 257 84.4
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 3.6e-122 441.8 257 82.9
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 3.6e-122 441.8 257 82.9
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 3.6e-122 441.8 257 82.9
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 1.8e-121 439.5 257 82.5
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 1.8e-121 439.5 257 82.5
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 1.8e-121 439.5 257 82.5
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 1.8e-121 439.5 257 82.5
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 1.8e-121 439.5 257 82.5
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 3.0e-121 438.7 257 82.1
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 4.0e-121 438.3 257 82.5
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 1.5e-120 436.4 257 81.3
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 1.5e-120 436.4 257 81.3
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 3.3e-120 435.3 257 81.3
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 4.4e-120 434.9 257 81.3
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 4.4e-120 434.9 257 81.3
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 4.8e-119 431.4 257 80.2
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 6.3e-119 431.0 302 71.2
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 1.4e-118 429.9 258 79.5
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.6e-117 426.4 257 78.2
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 2.0e-117 426.0 230 89.1
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 2.7e-117 425.6 257 80.2
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.0e-116 423.7 255 79.6
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 5.0e-116 421.4 257 79.4
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.6e-114 416.4 257 77.0
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 2.7e-114 415.6 257 80.9
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 2.6e-112 409.1 250 78.4
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 1.3e-111 406.8 281 74.0
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 1.4e-110 403.3 253 76.3
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 7.0e-110 401.0 254 76.8
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 7.0e-110 401.0 257 76.3
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 4.5e-109 398.3 214 85.5
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 8.8e-105 384.0 214 84.1
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 1.5e-104 383.3 257 76.3
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 6.3e-103 377.9 231 78.8
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 1.4e-102 376.7 257 74.3
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 7.7e-101 370.9 223 79.8
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 1.2e-96 357.1 256 68.4
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 1.1e-94 350.5 198 85.4
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 3.5e-93 345.5 251 68.5
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 6.6e-92 341.3 247 68.8
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 1.5e-91 340.1 250 67.2
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 2.0e-88 329.7 198 78.3
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 2.2e-87 326.2 251 65.3
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 6.6e-76 288.1 165 82.4
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 4.0e-73 278.9 170 77.1
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 3.8e-71 272.3 153 83.7
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 3.6e-66 255.8 132 93.2
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 1.4e-65 253.8 142 85.9
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 2.7e-61 239.6 254 50.4
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 2.5e-59 233.0 247 47.0
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 9.0e-57 224.6 198 61.6
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 3.8e-55 219.2 130 81.5
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 7.9e-53 211.5 116 81.9
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.8e-52 210.3 272 41.9
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 7.4e-51 204.9 112 88.4
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 9.6e-51 204.5 156 65.4
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 2.6e-48 196.4 114 83.3
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 7.6e-48 194.9 105 88.6
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 9.9e-48 194.5 105 88.6
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.4e-46 190.7 257 45.5
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 6.7e-44 181.8 105 83.8
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 1.4e-41 174.1 105 81.0
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 1.7e-39 167.2 104 79.8
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 9.7e-35 151.4 117 63.2
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 2.1e-34 150.2 91 73.6
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 1.1e-27 127.9 67 94.0
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 3.3e-27 126.3 102 62.7
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.0e-24 117.1 96 62.5
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 3.9e-20 102.8 60 81.7
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 5.9e-16 89.0 55 76.4
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 2.1e-13 80.5 60 70.0
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 4.1e-09 66.2 40 82.5


User provided reference genes

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