Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 2.5e-77 292.0 140 100.0
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 2.4e-27 125.9 128 49.2
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 4.0e-27 125.2 129 46.5
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 6.9e-27 124.4 121 48.8
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 1.5e-26 123.2 127 52.0
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 2.6e-26 122.5 127 45.7
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 3.4e-26 122.1 125 50.4
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 7.6e-26 120.9 128 46.9
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 3.8e-25 118.6 121 47.9
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 6.4e-25 117.9 127 44.1
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 8.4e-25 117.5 128 46.9
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 1.4e-24 116.7 128 48.4
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 1.9e-24 116.3 128 49.2
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 4.2e-24 115.2 125 48.8
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 1.2e-23 113.6 135 50.4
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 1.6e-23 113.2 121 43.8
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 1.6e-23 113.2 127 46.5
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 2.1e-23 112.8 122 44.3
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 4.6e-23 111.7 131 43.5
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 4.6e-23 111.7 133 42.9
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 1.8e-22 109.8 127 51.2
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 5.1e-22 108.2 130 49.2
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 5.1e-22 108.2 127 51.2
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 1.9e-21 106.3 124 46.0
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 1.9e-21 106.3 129 46.5
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 3.3e-21 105.5 128 40.6
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 5.6e-21 104.8 124 47.6
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 2.8e-20 102.4 128 44.5
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 3.7e-20 102.1 123 45.5
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 6.2e-20 101.3 125 45.6
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 8.1e-20 100.9 122 44.3
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 1.1e-19 100.5 122 46.7
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 1.1e-19 100.5 125 44.0
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 1.8e-19 99.8 132 43.2
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.8e-19 99.8 125 45.6
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 2.4e-19 99.4 124 44.4
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 2.4e-19 99.4 124 44.4
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 2.4e-19 99.4 126 46.0
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 4.0e-19 98.6 131 45.0
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 6.9e-19 97.8 123 43.9
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 6.9e-19 97.8 124 44.4
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 6.9e-19 97.8 124 42.7
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 9.0e-19 97.4 125 46.4
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 9.0e-19 97.4 123 46.3
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 1.2e-18 97.1 123 45.5
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.5e-18 96.7 125 45.6
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 2.0e-18 96.3 123 43.9
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 5.8e-18 94.7 127 44.1
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 5.8e-18 94.7 126 44.4
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 2.2e-17 92.8 131 41.2
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 6.5e-17 91.3 125 42.4
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 8.4e-17 90.9 131 41.2
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 1.9e-16 89.7 121 43.8
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 1.2e-15 87.0 131 39.7
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 2.7e-15 85.9 116 41.4
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 3.9e-14 82.0 116 41.4
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 1.9e-13 79.7 126 39.7
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 4.3e-13 78.6 126 38.9
ATR1120G014 Amborella trichopoda HOM05D007964 ORTHO05D010090 1.6e-12 76.6 124 38.7
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 2.1e-12 76.3 103 38.8
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 8.2e-12 74.3 103 38.8
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 1.1e-11 73.9 113 38.9
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 1.1e-11 73.9 90 43.3
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 1.8e-11 73.2 118 39.0
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 4.1e-11 72.0 129 33.3
HPP92_000633 Vanilla planifolia HOM05D007964 ORTHO05D010090 5.3e-11 71.6 118 34.7
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 6.9e-11 71.2 120 35.0
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 1.2e-10 70.5 92 41.3
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 3.4e-10 68.9 126 33.3
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 3.4e-10 68.9 92 41.3
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 4.5e-10 68.6 118 34.7
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 4.5e-10 68.6 118 34.7
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 5.9e-10 68.2 113 35.4
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 7.6e-10 67.8 89 41.6
Os02g0210900 Oryza sativa ssp. japonica HOM05D007964 ORTHO05D010090 5.0e-09 65.1 111 37.8
Nn3g17698 Nelumbo nucifera HOM05D002803 ORTHO05D003089 3.2e-08 62.4 68 44.1
Dinv05804 Davidia involucrata HOM05D002803 ORTHO05D003089 5.5e-08 61.6 131 32.1
PGSC0003DMG400007474 Solanum tuberosum HOM05D002803 ORTHO05D003089 5.5e-08 61.6 119 35.3
TAR622G0697 Trochodendron aralioides HOM05D002803 ORTHO05D003089 7.2e-08 61.2 114 35.1
TAR629G1495 Trochodendron aralioides HOM05D002803 ORTHO05D003089 7.2e-08 61.2 119 34.5
Nn4g23707 Nelumbo nucifera HOM05D002803 ORTHO05D003089 3.6e-07 58.9 51 51.0
Nn4g23709 Nelumbo nucifera HOM05D002803 ORTHO05D003089 3.6e-07 58.9 51 51.0
Actinidia38399 Actinidia chinensis HOM05D002803 ORTHO05D003089 6.1e-07 58.2 97 36.1
SGA_v2.0_scaffold16G07882 Striga asiatica HOM05D002803 ORTHO05D003089 6.1e-07 58.2 145 28.3
Ah.03g137920 Amaranthus hybridus HOM05D002803 ORTHO05D003089 3.9e-06 55.5 76 32.9
Dinv38592 Davidia involucrata HOM05D002803 ORTHO05D003089 3.9e-06 55.5 96 34.4
Nitab4.5_0000221g0090 Nicotiana tabacum HOM05D002803 ORTHO05D003089 3.9e-06 55.5 136 28.7
Oeu044623.1 Olea europaea HOM05D002803 ORTHO05D003089 5.1e-06 55.1 135 28.9
CANSAT80G1035 Cannabis sativa HOM05D002803 ORTHO05D003089 8.7e-06 54.3 35 60.0
Eucgr.B03059 Eucalyptus grandis HOM05D002803 ORTHO05D003089 8.7e-06 54.3 124 28.2


User provided reference genes

Program Settings