Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00434 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 0.0e+00 1120.1 552 100.0
TAR625G1249 Trochodendron aralioides HOM05D006367 ORTHO05D007942 6.7e-235 817.4 552 71.7
PSO675G5206 Papaver somniferum HOM05D006367 ORTHO05D007942 8.8e-227 790.4 559 69.8
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 1.8e-224 782.7 516 71.5
QL06p031689 Quercus lobata HOM05D006367 ORTHO05D007942 8.0e-220 767.3 468 75.9
Duzib187G0980 Durio zibethinus HOM05D006367 ORTHO05D007942 2.0e-218 762.7 491 72.7
Thecc.01G115500 Theobroma cacao HOM05D006367 ORTHO05D007942 1.3e-217 760.0 486 73.9
Gorai.003G048000 Gossypium raimondii HOM05D006367 ORTHO05D007942 3.7e-217 758.4 485 73.6
Ciclev10025312m.g Citrus clementina HOM05D006367 ORTHO05D007942 8.3e-217 757.3 480 74.0
Gohir.A02G136100 Gossypium hirsutum HOM05D006367 ORTHO05D007942 2.4e-216 755.7 485 73.0
COL.COLO4_10985 Corchorus olitorius HOM05D006367 ORTHO05D007942 4.1e-216 755.0 483 73.9
Eucgr.I00312 Eucalyptus grandis HOM05D006367 ORTHO05D007942 2.7e-215 752.3 512 69.7
Potri.005G085800 Populus trichocarpa HOM05D006367 ORTHO05D007942 5.9e-215 751.1 485 72.2
Manes.12G144300 Manihot esculenta HOM05D006367 ORTHO05D007942 1.0e-214 750.4 474 73.2
MBI04_g33338_MAGBIO Magnolia biondii HOM05D006367 ORTHO05D007942 1.3e-214 750.0 507 70.4
Atru.chr7.1822 Acer truncatum HOM05D006367 ORTHO05D007942 2.2e-214 749.2 492 72.8
Sabra05G0070700 Salix brachista HOM05D006367 ORTHO05D007942 9.4e-213 743.8 485 72.4
Oeu028362.1 Olea europaea HOM05D006367 ORTHO05D007942 2.7e-212 742.3 497 70.8
CiPaw.04G090000 Carya illinoinensis HOM05D006367 ORTHO05D007942 3.6e-212 741.9 482 73.4
CANSAT21G2601 Cannabis sativa HOM05D006367 ORTHO05D007942 4.7e-212 741.5 488 71.9
FAN19G1918 Fragaria x ananassa HOM05D006367 ORTHO05D007942 2.2e-209 732.6 460 73.9
RcHm_v2.0_Chr2g0117401 Rosa chinensis HOM05D006367 ORTHO05D007942 2.2e-209 732.6 463 73.9
TWI75G1400 Tripterygium wilfordii HOM05D006367 ORTHO05D007942 2.2e-209 732.6 486 70.8
Sopen04g022980 Solanum pennellii HOM05D006367 ORTHO05D007942 3.7e-209 731.9 528 66.9
Cc07_g16470 Coffea canephora HOM05D006367 ORTHO05D007942 1.1e-208 730.3 506 69.0
AT2G21860 Arabidopsis thaliana HOM05D006367 ORTHO05D007942 1.4e-208 729.9 485 71.1
PGR004G1961 Punica granatum HOM05D006367 ORTHO05D007942 1.8e-208 729.6 477 73.8
Cfa002770 Carpinus fangiana HOM05D006367 ORTHO05D007942 2.4e-208 729.2 485 72.8
Nitab4.5_0009050g0050 Nicotiana tabacum HOM05D006367 ORTHO05D007942 2.4e-208 729.2 483 71.6
FAN26G2292 Fragaria x ananassa HOM05D006367 ORTHO05D007942 9.1e-208 727.2 462 72.9
arahy.Tifrunner.gnm1.ann1.511U58 Arachis hypogaea HOM05D006367 ORTHO05D007942 1.2e-207 726.9 466 71.9
Haze_25063 Corylus avellana HOM05D006367 ORTHO05D007942 1.6e-207 726.5 487 71.7
Solyc04g051610.3 Solanum lycopersicum HOM05D006367 ORTHO05D007942 3.5e-207 725.3 527 66.2
Carub.0004s0089 Capsella rubella HOM05D006367 ORTHO05D007942 5.9e-207 724.5 510 67.8
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 7.7e-207 724.2 485 70.1
Nitab4.5_0000184g0160 Nicotiana tabacum HOM05D006367 ORTHO05D007942 7.7e-207 724.2 496 70.2
RcHm_v2.0_Chr2g0117461 Rosa chinensis HOM05D006367 ORTHO05D007942 2.3e-206 722.6 463 72.8
arahy.Tifrunner.gnm1.ann1.GSD986 Arachis hypogaea HOM05D006367 ORTHO05D007942 2.9e-206 722.2 466 71.2
Dinv42673 Davidia involucrata HOM05D006367 ORTHO05D007942 6.6e-206 721.1 441 76.2
FAN23G0352 Fragaria x ananassa HOM05D006367 ORTHO05D007942 1.1e-205 720.3 463 73.0
Prupe.6G168900 Prunus persica HOM05D006367 ORTHO05D007942 1.9e-205 719.5 529 66.2
MD10G1028700 Malus domestica HOM05D006367 ORTHO05D007942 5.6e-205 718.0 483 69.8
BcaB06g27790 Brassica carinata HOM05D006367 ORTHO05D007942 7.2e-205 717.6 512 67.0
MSTRG.23307 Avicennia marina HOM05D006367 ORTHO05D007942 1.2e-204 716.8 458 73.1
CARHR112860 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.2e-204 716.8 474 71.3
Thhalv10000126m.g Eutrema salsugineum HOM05D006367 ORTHO05D007942 1.2e-204 716.8 510 67.8
BcaC02g08760 Brassica carinata HOM05D006367 ORTHO05D007942 1.6e-204 716.5 480 71.0
C04p50960 Brassica napus HOM05D006367 ORTHO05D007942 1.6e-204 716.5 480 71.0
Sc14g0009250 Simmondsia chinensis HOM05D006367 ORTHO05D007942 1.8e-203 713.0 464 72.8
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 2.3e-203 712.6 456 72.4
BraA04t17280Z Brassica rapa HOM05D006367 ORTHO05D007942 6.8e-203 711.1 480 70.2
A04p16450 Brassica napus HOM05D006367 ORTHO05D007942 2.0e-202 709.5 480 70.2
VMungo0251G2542 Vigna mungo HOM05D006367 ORTHO05D007942 2.6e-202 709.1 466 70.8
Sp4g00950 Schrenkiella parvula HOM05D006367 ORTHO05D007942 5.7e-202 708.0 513 66.9
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 9.8e-202 707.2 461 71.4
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 1.8e-200 703.0 461 73.5
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 1.8e-200 703.0 482 68.7
MELO3C034581.2 Cucumis melo HOM05D006367 ORTHO05D007942 9.2e-200 700.7 511 65.4
ClCG02G000950 Citrullus lanatus HOM05D006367 ORTHO05D007942 2.0e-199 699.5 476 70.4
AUR62040525 Chenopodium quinoa HOM05D006367 ORTHO05D007942 3.5e-199 698.7 461 69.4
Psat7g050440 Pisum sativum HOM05D006367 ORTHO05D007942 7.8e-199 697.6 548 63.1
SalBow6G4439 Salvia bowleyana HOM05D006367 ORTHO05D007942 5.0e-198 694.9 463 68.9
MELO3C020965.2 Cucumis melo HOM05D006367 ORTHO05D007942 1.5e-197 693.3 511 65.6
HanXRQChr03g0078741 Helianthus annuus HOM05D006367 ORTHO05D007942 9.5e-197 690.6 454 71.6
ECA240G4594 Erigeron canadensis HOM05D006367 ORTHO05D007942 1.6e-196 689.9 467 68.5
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 2.8e-196 689.1 460 70.2
CsaV3_2G017740 Cucumis sativus L. HOM05D006367 ORTHO05D007942 3.6e-196 688.7 511 64.8
Lj4g0025161 Lotus japonicus HOM05D006367 ORTHO05D007942 6.2e-196 688.0 515 63.9
SGA_v2.0_scaffold2G01287 Striga asiatica HOM05D006367 ORTHO05D007942 6.2e-196 688.0 470 68.5
Aa31LG7G14760 Aethionema arabicum HOM05D006367 ORTHO05D007942 2.3e-195 686.0 483 70.0
CSS0012231 Camellia sinensis var. sinensis HOM05D006367 ORTHO05D007942 4.0e-195 685.3 425 73.6
TPR.G2178 Trifolium pratense HOM05D006367 ORTHO05D007942 1.2e-194 683.7 463 68.5
Lalb_Chr07g0184731 Lupinus albus HOM05D006367 ORTHO05D007942 3.4e-194 682.2 457 69.4
Glyma.05G184900 Glycine max HOM05D006367 ORTHO05D007942 4.9e-193 678.3 461 68.3
Medtr8g092050 Medicago truncatula HOM05D006367 ORTHO05D007942 4.9e-193 678.3 474 67.1
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 1.9e-192 676.4 513 61.2
Lsat_1_v5_gn_5_44981 Lactuca sativa HOM05D006367 ORTHO05D007942 2.4e-192 676.0 457 70.0
AUR62039784 Chenopodium quinoa HOM05D006367 ORTHO05D007942 7.0e-192 674.5 439 70.4
Ca_17687_v3 Cicer arietinum L. HOM05D006367 ORTHO05D007942 2.0e-191 672.9 465 67.5
CAN.G1044.2 Capsicum annuum HOM05D006367 ORTHO05D007942 2.3e-190 669.5 464 68.8
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 6.6e-190 667.9 435 71.7
DCAR_011462 Daucus carota HOM05D006367 ORTHO05D007942 1.1e-189 667.2 464 68.3
Zm00001eb361490 Zea mays HOM05D006367 ORTHO05D007942 1.1e-189 667.2 453 67.5
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 1.9e-189 666.4 425 72.2
FvH4_1g22940 Fragaria vesca HOM05D006367 ORTHO05D007942 3.3e-189 665.6 423 73.3
Os01g0716400 Oryza sativa ssp. japonica HOM05D006367 ORTHO05D007942 4.3e-189 665.2 453 68.0
RcHm_v2.0_Chr2g0117441 Rosa chinensis HOM05D006367 ORTHO05D007942 4.3e-189 665.2 423 73.3
CDE06G2209 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 8.1e-188 661.0 435 68.7
CARHR112850 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.8e-187 659.8 454 69.4
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 9.2e-184 647.5 475 63.4
Actinidia05379 Actinidia chinensis HOM05D006367 ORTHO05D007942 1.1e-181 640.6 425 69.9
Sed0027379 Sechium edule HOM05D006367 ORTHO05D007942 3.4e-178 629.0 419 70.9
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 4.4e-178 628.6 420 71.0
Cc04_g11230 Coffea canephora HOM05D006367 ORTHO05D007942 2.2e-169 599.7 425 67.5
Gohir.D03G046900 Gossypium hirsutum HOM05D006367 ORTHO05D007942 2.3e-166 589.7 346 78.3
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 4.9e-145 518.8 462 53.0
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 3.2e-144 516.2 445 54.2
Nitab4.5_0005102g0010 Nicotiana tabacum HOM05D006367 ORTHO05D007942 1.6e-143 513.8 563 50.3
SMO367G0721 Selaginella moellendorffii HOM05D006367 ORTHO05D007942 1.9e-141 506.9 470 51.1
Phvul.002G265800 Phaseolus vulgaris HOM05D006367 ORTHO05D007942 4.3e-133 479.2 344 65.1
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 1.9e-128 463.8 502 44.4
PGSC0003DMG400020963 Solanum tuberosum HOM05D006367 ORTHO05D007942 4.2e-128 462.6 425 54.6
Peaxi162Scf00106g01216 Petunia axillaris HOM05D006367 ORTHO05D007942 3.5e-114 416.4 465 49.9
PGSC0003DMG400023291 Solanum tuberosum HOM05D006367 ORTHO05D007942 4.0e-110 402.9 289 65.7
Eucgr.L02754 Eucalyptus grandis HOM05D006367 ORTHO05D007942 4.0e-102 376.3 305 60.7
Cre09.g388060 Chlamydomonas reinhardtii HOM05D006367 ORTHO05D007942 6.3e-100 369.0 470 41.9
PGSC0003DMG400031203 Solanum tuberosum HOM05D006367 ORTHO05D007942 7.2e-96 355.5 204 78.4
AagrBONN_evm.TU.Sc2ySwM_344.1355 Anthoceros agrestis HOM05D006367 ORTHO05D007942 2.6e-93 347.1 446 40.8
MCO11G553 Micromonas commoda HOM05D006367 ORTHO05D007942 8.3e-92 342.0 500 39.8
unitig_899.g14612 Utricularia gibba HOM05D006367 ORTHO05D007942 5.4e-83 312.8 235 63.4
Glyma.08G142950 Glycine max HOM05D006367 ORTHO05D007942 2.3e-81 307.4 183 75.4
Aqoxy4G01385 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 7.3e-80 302.4 150 94.7
Aqoxy4G01201 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.4e-78 298.1 150 93.3
PRCOL_00006729 Prasinoderma coloniale HOM05D006367 ORTHO05D007942 1.2e-74 285.0 466 36.3
Hma1.2p1_0696F.1_g204650 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 7.8e-74 282.3 271 56.1
HPP92_027992 Vanilla planifolia HOM05D006367 ORTHO05D007942 3.5e-66 256.9 230 54.8
Glyma.08G142900 Glycine max HOM05D006367 ORTHO05D007942 2.8e-63 247.3 223 56.5
PGSC0003DMG400004546 Solanum tuberosum HOM05D006367 ORTHO05D007942 4.9e-44 183.3 425 30.6
GSVIVG01022252001 Vitis vinifera HOM05D006367 ORTHO05D007942 1.2e-42 178.7 177 54.2
vmacro12891 Vaccinium macrocarpon HOM05D006367 ORTHO05D007942 7.6e-21 106.3 109 53.2
Haze_08452 Corylus avellana HOM05D014029 ORTHO05D044818 2.1e-18 98.2 73 58.9
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 2.4e-14 84.7 74 56.8
Hma1.2p1_0696F.1_g204670 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 5.3e-14 83.6 47 70.2
PRCOL_00001224 Prasinoderma coloniale HOM05D006573 ORTHO05D008073 1.2e-13 82.4 302 26.5
CARHR293120 Cardamine hirsuta HOM05D006367 ORTHO05D007942 2.6e-13 81.3 92 47.8
CARHR034070 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.7e-12 78.6 141 36.9
MCO16G084 Micromonas commoda HOM05D006573 ORTHO05D008073 2.2e-12 78.2 265 24.2
Haze_24492 Corylus avellana HOM05D001078 ORTHO05D000927 6.5e-12 76.6 56 73.2
CBR_g38554 Chara braunii HOM05D006573 ORTHO05D008073 2.3e-09 68.2 289 20.1


User provided reference genes

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