Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 4.1e-196 688.0 369 100.0
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 3.8e-149 531.9 362 76.0
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 4.2e-148 528.5 366 75.1
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.4e-143 513.5 364 74.7
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 4.0e-143 511.9 323 81.4
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 2.0e-142 509.6 361 73.4
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 1.4e-140 503.4 310 81.3
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 3.2e-140 502.3 318 80.8
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 3.2e-140 502.3 361 72.6
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 5.5e-140 501.5 307 81.8
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 7.1e-140 501.1 317 80.8
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 2.7e-139 499.2 319 78.7
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 3.5e-139 498.8 323 79.3
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 1.3e-138 496.9 315 79.0
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 8.7e-138 494.2 319 78.7
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.5e-137 493.4 361 71.7
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 4.3e-137 491.9 360 70.8
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 5.6e-137 491.5 368 69.6
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 5.6e-137 491.5 374 68.7
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 5.6e-137 491.5 367 70.3
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 1.6e-136 490.0 324 77.8
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.6e-136 490.0 303 80.5
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 1.6e-136 490.0 301 81.4
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 2.1e-136 489.6 308 80.8
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 6.2e-136 488.0 303 79.9
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 8.2e-136 487.6 360 70.6
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.1e-135 487.3 360 69.4
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 3.1e-135 485.7 366 70.8
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 5.3e-135 485.0 313 79.2
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 5.3e-135 485.0 336 75.6
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 6.9e-135 484.6 308 79.9
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 1.2e-134 483.8 309 77.7
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.0e-134 483.0 360 70.8
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 3.4e-134 482.3 364 69.2
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 5.8e-134 481.5 310 78.4
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 1.0e-133 480.7 316 76.3
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 1.3e-133 480.3 306 79.7
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 2.2e-133 479.6 366 69.7
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 2.9e-133 479.2 309 79.9
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 3.8e-133 478.8 316 77.2
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 1.1e-132 477.2 363 70.5
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 1.1e-132 477.2 303 79.2
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.4e-132 476.9 371 69.3
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.5e-132 476.1 311 77.8
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 3.2e-132 475.7 320 76.9
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 5.5e-132 474.9 308 78.9
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 7.1e-132 474.6 304 78.9
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 7.1e-132 474.6 314 77.1
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 7.1e-132 474.6 360 69.2
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.2e-131 473.8 306 78.1
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 1.6e-131 473.4 309 76.1
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 2.1e-131 473.0 307 78.5
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 2.7e-131 472.6 360 69.2
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 3.5e-131 472.2 313 75.1
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 4.6e-131 471.9 362 68.8
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 6.7e-130 468.0 309 78.3
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 3.3e-129 465.7 311 75.9
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 7.4e-129 464.5 361 69.3
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 1.3e-128 463.8 305 77.0
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 2.2e-128 463.0 328 72.0
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.7e-128 462.2 297 79.5
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 4.8e-128 461.8 357 67.2
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 4.8e-128 461.8 328 72.0
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 8.2e-128 461.1 357 66.9
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 1.1e-127 460.7 357 66.9
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.1e-127 460.7 319 73.7
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.1e-127 460.7 319 73.7
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 1.1e-127 460.7 319 72.7
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 1.4e-127 460.3 319 73.7
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.4e-127 460.3 325 73.8
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 4.1e-127 458.8 319 73.0
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 5.3e-127 458.4 313 75.7
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 2.0e-126 456.4 319 72.7
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 3.4e-126 455.7 319 73.0
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 1.0e-125 454.1 357 66.9
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 6.5e-125 451.4 282 80.5
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 4.6e-123 445.3 361 67.3
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 7.9e-123 444.5 284 77.5
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 9.1e-119 431.0 508 50.8
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.5e-118 430.3 307 70.4
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 1.5e-118 430.3 310 71.0
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 1.9e-116 423.3 462 54.3
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 3.6e-115 419.1 277 75.8
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 5.1e-114 415.2 312 67.6
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 5.7e-113 411.8 303 68.0
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 1.5e-110 403.7 304 68.8
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 8.0e-107 391.3 290 68.6
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 8.8e-106 387.9 319 63.0
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 4.4e-105 385.6 210 90.0
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 2.0e-102 376.7 409 53.3
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 4.2e-100 369.0 295 68.1
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 2.6e-97 359.8 313 60.7
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 4.8e-96 355.5 211 84.8
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 3.1e-87 326.2 199 81.9
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 5.9e-86 322.0 168 93.5
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.6e-83 313.9 326 53.7
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.7e-83 312.4 199 79.4
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.5e-81 307.4 301 57.1
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.5e-78 295.8 190 78.4
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.0e-77 294.7 190 77.9
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 1.0e-77 294.7 166 88.6
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.7e-77 293.9 246 65.0
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.7e-77 293.9 246 65.0
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 6.8e-74 282.0 193 75.1
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 8.9e-74 281.6 167 83.8
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 9.2e-71 271.6 323 50.8
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.5e-68 264.2 258 50.4
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.6e-67 260.8 148 85.1
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.4e-63 247.7 186 68.8
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.5e-60 237.7 259 49.0
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 6.2e-59 232.3 143 79.0
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.3e-53 214.5 155 70.3
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 3.4e-49 199.9 142 71.8
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.3e-45 188.0 108 86.1
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 7.1e-39 165.6 96 78.1
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 9.0e-34 148.7 113 67.3
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 7.1e-31 139.0 247 34.8
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 1.3e-29 134.8 80 83.8
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 7.1e-23 112.5 258 34.1
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.8e-19 100.5 103 48.5
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 1.2e-14 85.1 48 77.1
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 6.3e-11 72.8 47 76.6
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 2.2e-08 64.3 71 49.3


User provided reference genes

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