Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00363 Aquilegia oxysepala HOM05D018088 ORTHO05D019685 6.4e-165 583.9 281 100.0
Aqoxy1G03571 Aquilegia oxysepala HOM05D000072 ORTHO05D019685 9.6e-113 410.6 241 78.8
Aqoxy6G00364 Aquilegia oxysepala HOM05D018088 ORTHO05D019685 8.5e-109 397.5 263 72.6
MBI06_g29679_MAGBIO Magnolia biondii HOM05D018088 ORTHO05D019685 9.5e-60 234.6 262 50.0
MBI06_g46973_MAGBIO Magnolia biondii HOM05D018088 ORTHO05D019685 1.6e-59 233.8 258 49.2
MBI06_g29677_MAGBIO Magnolia biondii HOM05D018088 ORTHO05D019685 6.1e-59 231.9 235 51.5
MBI06_g27429_MAGBIO Magnolia biondii HOM05D018088 ORTHO05D019685 1.8e-58 230.3 263 50.2
Aqoxy5G02233 Aquilegia oxysepala HOM05D000072 ORTHO05D000026 4.6e-22 109.4 275 31.3
Aqoxy5G02230 Aquilegia oxysepala HOM05D000072 ORTHO05D000026 3.9e-21 106.3 272 30.5
SEGI_33663 Sequoiadendron giganteum HOM05D000072 ORTHO05D000026 9.3e-15 85.1 237 30.8
SEGI_08715 Sequoiadendron giganteum HOM05D000072 ORTHO05D000026 3.9e-13 79.7 234 29.1
SEGI_22576 Sequoiadendron giganteum HOM05D000072 ORTHO05D000026 2.1e-11 73.9 241 29.5
SEGI_01518 Sequoiadendron giganteum HOM05D000072 ORTHO05D000026 1.4e-10 71.2 265 27.5
AL2G25340 Arabidopsis lyrata HOM05D000260 ORTHO05D000318 1.3e-08 64.7 238 27.7
CSS0032470 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 1.7e-08 64.3 251 24.3
PGR102G2179 Punica granatum HOM05D000072 ORTHO05D000026 1.1e-07 61.6 273 26.0
CAN.G625.37 Capsicum annuum HOM05D000072 ORTHO05D000026 1.4e-07 61.2 275 26.9
Cc11_g09730 Coffea canephora HOM05D000260 ORTHO05D004405 1.9e-07 60.8 236 24.2
Os01g0138400 Oryza sativa ssp. japonica HOM05D000072 ORTHO05D000026 1.9e-07 60.8 235 26.0
Actinidia38367 Actinidia chinensis HOM05D000260 ORTHO05D000318 4.2e-07 59.7 251 21.9
Rhsim10G0069700 Rhododendron simsii HOM05D000260 ORTHO05D000318 4.2e-07 59.7 248 27.8
Gohir.A12G088200 Gossypium hirsutum HOM05D003287 ORTHO05D003688 7.1e-07 58.9 287 25.4
MSTRG.13550 Avicennia marina HOM05D000260 ORTHO05D000318 9.3e-07 58.5 244 27.0
CSS0023814 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 9.3e-07 58.5 271 24.4
CSS0035733 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 9.3e-07 58.5 273 22.7
Hma1.2p1_3297F.1_g334990 Hydrangea macrophylla HOM05D000260 ORTHO05D004405 1.6e-06 57.8 231 24.2
Sopen02g030960 Solanum pennellii HOM05D000260 ORTHO05D000318 1.6e-06 57.8 247 24.7
Gohir.D12G086400 Gossypium hirsutum HOM05D003287 ORTHO05D003688 2.1e-06 57.4 279 26.5
Gorai.008G096700 Gossypium raimondii HOM05D003287 ORTHO05D003688 2.1e-06 57.4 279 26.5
Solyc02g086210.4 Solanum lycopersicum HOM05D000072 ORTHO05D000318 2.1e-06 57.4 244 25.4
AT1G67025 Arabidopsis thaliana HOM05D000260 ORTHO05D000318 2.7e-06 57.0 198 27.8
TAR629G1802 Trochodendron aralioides HOM05D000260 ORTHO05D004405 2.7e-06 57.0 233 26.6
CiPaw.15G133000 Carya illinoinensis HOM05D000260 ORTHO05D000318 4.6e-06 56.2 307 28.3
CDE12G0253 Ceratophyllum demersum HOM05D000260 ORTHO05D000318 7.9e-06 55.5 280 24.6
PGSC0003DMG401005729 Solanum tuberosum HOM05D000260 ORTHO05D000318 7.9e-06 55.5 253 25.7


User provided reference genes

Program Settings