Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00345 Aquilegia oxysepala HOM05D000085 ORTHO05D009791 1.9e-136 489.2 253 100.0
Aqoxy6G00346 Aquilegia oxysepala HOM05D000485 ORTHO05D009791 1.3e-79 300.4 208 75.5
TAR628G0721 Trochodendron aralioides HOM05D000085 ORTHO05D009791 7.0e-54 214.9 217 53.0
TWI60G0672 Tripterygium wilfordii HOM05D000085 ORTHO05D009791 2.0e-53 213.4 206 53.9
Manes.02G172500 Manihot esculenta HOM05D000085 ORTHO05D009791 1.7e-52 210.3 215 53.0
FAN27G0973 Fragaria x ananassa HOM05D000085 ORTHO05D009791 6.1e-50 201.8 213 49.3
Prupe.8G012500 Prunus persica HOM05D000085 ORTHO05D009791 6.1e-50 201.8 205 50.7
Potri.005G185500 Populus trichocarpa HOM05D000085 ORTHO05D009791 8.0e-50 201.4 202 52.0
Prupe.8G012300 Prunus persica HOM05D008363 ORTHO05D009791 1.8e-49 200.3 205 51.2
FvH4_2g15260 Fragaria vesca HOM05D000085 ORTHO05D009791 2.3e-49 199.9 213 49.8
FAN15G3404 Fragaria x ananassa HOM05D000085 ORTHO05D009791 2.3e-49 199.9 213 49.8
MBI03_g20848_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D009791 3.0e-49 199.5 233 45.9
Cpa.g.sc26.71 Carica papaya HOM05D000085 ORTHO05D009791 5.2e-49 198.7 205 49.8
Lj4A685T34 Lonicera japonica HOM05D000085 ORTHO05D009791 1.2e-48 197.6 219 49.8
Duzib093G0943 Durio zibethinus HOM05D000085 ORTHO05D009791 4.4e-48 195.7 193 53.9
Atru.chr13.1646 Acer truncatum HOM05D000085 ORTHO05D009791 5.7e-48 195.3 207 50.2
RcHm_v2.0_Chr6g0277981 Rosa chinensis HOM05D000085 ORTHO05D009791 7.5e-48 194.9 213 48.4
Manes.18G084900 Manihot esculenta HOM05D000085 ORTHO05D009791 2.2e-47 193.4 205 50.7
Peaxi162Scf00066g01519 Petunia axillaris HOM05D000085 ORTHO05D009791 6.3e-47 191.8 227 44.1
Cfa018397 Carpinus fangiana HOM05D000085 ORTHO05D009791 8.3e-47 191.4 202 47.5
CSS0024542 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D009791 1.4e-46 190.7 201 50.2
Ciclev10003429m.g Citrus clementina HOM05D000085 ORTHO05D009791 2.4e-46 189.9 211 47.4
MD05G1010000 Malus domestica HOM05D000085 ORTHO05D009791 1.6e-45 187.2 205 49.3
Prupe.8G012200 Prunus persica HOM05D000085 ORTHO05D009791 2.7e-45 186.4 183 51.4
Thecc.08G138000 Theobroma cacao HOM05D000085 ORTHO05D009791 3.5e-45 186.0 210 49.0
Sopen04g026290 Solanum pennellii HOM05D000085 ORTHO05D009791 1.3e-44 184.1 208 48.6
CsaV3_6G031170 Cucumis sativus L. HOM05D000085 ORTHO05D009791 1.7e-44 183.7 199 49.7
Solyc04g063370.3 Solanum lycopersicum HOM05D000085 ORTHO05D009791 1.7e-44 183.7 223 46.2
CAN.G46.6 Capsicum annuum HOM05D000085 ORTHO05D009791 3.8e-44 182.6 198 48.5
MD10G1008700 Malus domestica HOM05D000085 ORTHO05D009791 3.8e-44 182.6 195 47.7
Gorai.005G084800 Gossypium raimondii HOM05D000085 ORTHO05D009791 5.0e-44 182.2 223 48.0
MELO3C008431.2 Cucumis melo HOM05D000085 ORTHO05D009791 6.6e-44 181.8 199 49.2
Migut.C01091 Erythranthe guttata HOM05D000085 ORTHO05D009791 6.6e-44 181.8 215 44.2
SalBow6G4001 Salvia bowleyana HOM05D000085 ORTHO05D009791 1.1e-43 181.0 201 48.3
Nitab4.5_0000174g0070 Nicotiana tabacum HOM05D000085 ORTHO05D009791 1.5e-43 180.6 208 46.6
Actinidia29501 Actinidia chinensis HOM05D000085 ORTHO05D009791 1.9e-43 180.3 211 46.4
DCAR_031504 Daucus carota HOM05D000085 ORTHO05D009791 1.9e-43 180.3 225 43.1
Sed0010025 Sechium edule HOM05D000085 ORTHO05D009791 2.5e-43 179.9 202 46.5
ClCG08G006270 Citrullus lanatus HOM05D000085 ORTHO05D009791 4.3e-43 179.1 165 53.9
Actinidia03435 Actinidia chinensis HOM05D000085 ORTHO05D009791 2.8e-42 176.4 213 44.1
COL.COLO4_07812 Corchorus olitorius HOM05D000085 ORTHO05D009791 2.6e-40 169.9 212 43.4
GSVIVG01009979001 Vitis vinifera HOM05D000085 ORTHO05D009791 7.5e-40 168.3 202 48.0
Cc10_g13260 Coffea canephora HOM05D000085 ORTHO05D009791 2.4e-38 163.3 216 46.8
Eucgr.F02764 Eucalyptus grandis HOM05D000085 ORTHO05D009791 4.1e-38 162.5 206 45.1
CANSAT21G2494 Cannabis sativa HOM05D000085 ORTHO05D009791 5.4e-38 162.2 180 48.3
Glyma.06G120400 Glycine max HOM05D000085 ORTHO05D009791 5.4e-38 162.2 209 43.5
Lj1g0014811 Lotus japonicus HOM05D000085 ORTHO05D009791 5.4e-38 162.2 202 43.6
Psat5g083480 Pisum sativum HOM05D000085 ORTHO05D009791 1.0e-36 157.9 207 39.6
Glyma.13G036300 Glycine max HOM05D000085 ORTHO05D009791 3.9e-36 156.0 213 39.4
Phvul.009G133000 Phaseolus vulgaris HOM05D000085 ORTHO05D009791 6.6e-36 155.2 204 43.6
Medtr3g088855 Medicago truncatula HOM05D000085 ORTHO05D009791 1.1e-35 154.5 210 41.0
VMungo1309G2437 Vigna mungo HOM05D000085 ORTHO05D009791 1.1e-35 154.5 212 42.0
TPR.G6314 Trifolium pratense HOM05D000085 ORTHO05D009791 1.5e-35 154.1 202 41.1
arahy.Tifrunner.gnm1.ann1.NCK985 Arachis hypogaea HOM05D000085 ORTHO05D009791 4.3e-35 152.5 207 40.6
Gohir.D02G075666 Gossypium hirsutum HOM05D000085 ORTHO05D009791 1.8e-33 147.1 197 44.2
Lsat_1_v5_gn_4_135701 Lactuca sativa HOM05D000085 ORTHO05D009791 1.8e-33 147.1 198 42.9
SalBow7G4502 Salvia bowleyana HOM05D000085 ORTHO05D009791 1.8e-33 147.1 237 39.7
Migut.N03251 Erythranthe guttata HOM05D000085 ORTHO05D009791 2.3e-33 146.7 209 41.1
Gohir.D02G075400 Gossypium hirsutum HOM05D000085 ORTHO05D009791 2.3e-33 146.7 171 49.1
Gohir.A02G068900 Gossypium hirsutum HOM05D000085 ORTHO05D009791 3.1e-33 146.4 172 50.0
arahy.Tifrunner.gnm1.ann1.8T63F8 Arachis hypogaea HOM05D000085 ORTHO05D009791 5.2e-33 145.6 217 40.1
Gorai.005G084900 Gossypium raimondii HOM05D000085 ORTHO05D009791 1.5e-32 144.1 161 49.7
FAN24G2618 Fragaria x ananassa HOM05D000085 ORTHO05D009791 3.4e-32 142.9 152 50.7
HanXRQChr09g0254091 Helianthus annuus HOM05D000085 ORTHO05D009791 1.1e-30 137.9 206 40.3
Gorai.009G251100 Gossypium raimondii HOM05D000085 ORTHO05D009791 1.1e-25 121.3 136 50.7
Gohir.A02G068901 Gossypium hirsutum HOM05D000085 ORTHO05D009791 6.8e-25 118.6 177 40.1
Zm00001eb145720 Zea mays HOM05D000085 ORTHO05D009791 8.9e-25 118.2 158 40.5
Oeu045987.1 Olea europaea HOM05D000085 ORTHO05D009791 8.3e-23 111.7 148 43.2
Hma1.2p1_0107F.1_g051220 Hydrangea macrophylla HOM05D000085 ORTHO05D009791 1.2e-21 107.8 93 57.0
CSS0026512 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D009791 6.0e-21 105.5 94 54.3
Potri.003G189850 Populus trichocarpa HOM05D000085 ORTHO05D006184 3.9e-20 102.8 159 31.4
AagrBONN_evm.TU.Sc2ySwM_228.2886 Anthoceros agrestis HOM05D000085 ORTHO05D001756 1.6e-18 97.4 161 33.5
Aqoxy2G00032 Aquilegia oxysepala HOM05D000085 ORTHO05D006184 2.8e-18 96.7 171 30.4
PSO675G2913 Papaver somniferum HOM05D000085 ORTHO05D006184 2.0e-16 90.5 163 31.3
Gohir.D10G199700 Gossypium hirsutum HOM05D000085 ORTHO05D006184 2.6e-16 90.1 183 27.3
Gorai.011G223900 Gossypium raimondii HOM05D000085 ORTHO05D006184 1.7e-15 87.4 159 29.6
SalBow6G0214 Salvia bowleyana HOM05D000085 ORTHO05D009791 2.2e-15 87.0 127 33.9
Haze_02957 Corylus avellana HOM05D000085 ORTHO05D006184 4.9e-15 85.9 198 25.8
FAN01G1090 Fragaria x ananassa HOM05D000085 ORTHO05D006184 4.9e-15 85.9 149 32.2
Thecc.10G132100 Theobroma cacao HOM05D000085 ORTHO05D006184 4.9e-15 85.9 159 29.6
FAN03G0175 Fragaria x ananassa HOM05D000085 ORTHO05D006184 6.4e-15 85.5 149 32.2
FAN06G0172 Fragaria x ananassa HOM05D000085 ORTHO05D006184 1.1e-14 84.7 164 29.9
FAN06G0213 Fragaria x ananassa HOM05D000085 ORTHO05D006184 1.1e-14 84.7 164 29.9
Manes.04G153800 Manihot esculenta HOM05D000085 ORTHO05D006184 1.1e-14 84.7 159 28.9
ECA232G1150 Erigeron canadensis HOM05D000085 ORTHO05D009791 4.1e-14 82.8 92 46.7
Lj9A652T57 Lonicera japonica HOM05D000085 ORTHO05D006184 5.4e-14 82.4 206 26.7
Nitab4.5_0003622g0040 Nicotiana tabacum HOM05D000085 ORTHO05D009791 5.4e-14 82.4 91 48.4
Actinidia01698 Actinidia chinensis HOM05D000085 ORTHO05D006184 7.1e-14 82.0 177 26.0
Lsat_1_v5_gn_2_96380 Lactuca sativa HOM05D000085 ORTHO05D006184 9.2e-14 81.6 218 24.3
PSO541G3755 Papaver somniferum HOM05D000085 ORTHO05D006184 9.2e-14 81.6 175 28.6
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.6e-13 80.9 159 30.8
Pp3c22_14520 Physcomitrium patens HOM05D016224 ORTHO05D023076 1.6e-13 80.9 156 34.0
Sed0014409 Sechium edule HOM05D000085 ORTHO05D006184 1.6e-13 80.9 184 29.3
DCAR_029721 Daucus carota HOM05D000085 ORTHO05D006184 2.7e-13 80.1 200 26.0
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 6.0e-13 79.0 178 27.0
Pp3c8_3850 Physcomitrium patens HOM05D016224 ORTHO05D023076 1.0e-12 78.2 154 26.6
PGR044G1330 Punica granatum HOM05D000085 ORTHO05D006184 1.0e-12 78.2 164 22.6
MELO3C011783.2 Cucumis melo HOM05D000085 ORTHO05D006184 1.3e-12 77.8 168 27.4
TWI79G0144 Tripterygium wilfordii HOM05D000085 ORTHO05D006184 1.3e-12 77.8 165 26.7
Duzib128G0691 Durio zibethinus HOM05D000085 ORTHO05D006184 2.3e-12 77.0 196 26.5
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.3e-12 77.0 175 29.7
Gohir.A10G191900 Gossypium hirsutum HOM05D000085 ORTHO05D006184 3.0e-12 76.6 170 26.5
Pp3c8_1070 Physcomitrium patens HOM05D000085 ORTHO05D001756 3.0e-12 76.6 198 27.3
Potri.001G035900 Populus trichocarpa HOM05D000085 ORTHO05D006184 3.0e-12 76.6 173 26.6
Haze_17669 Corylus avellana HOM05D000085 ORTHO05D009791 3.9e-12 76.3 75 45.3
Sed0020592 Sechium edule HOM05D000085 ORTHO05D006184 3.9e-12 76.3 126 30.2
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 5.1e-12 75.9 214 28.0
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 5.1e-12 75.9 214 28.0
PGR119G1958 Punica granatum HOM05D000085 ORTHO05D006184 1.1e-11 74.7 160 26.9
Lj6g0021794 Lotus japonicus HOM05D000085 ORTHO05D015977 1.5e-11 74.3 150 24.7
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.5e-11 74.3 178 28.1
Lj2A829G58 Lonicera japonica HOM05D000085 ORTHO05D006184 1.9e-11 73.9 219 25.6
Cpa.g.sc33.152 Carica papaya HOM05D000085 ORTHO05D006184 2.5e-11 73.6 207 23.2
COL.COLO4_32861 Corchorus olitorius HOM05D000085 ORTHO05D006184 4.3e-11 72.8 171 28.1
CsaV3_5G029350 Cucumis sativus L. HOM05D000085 ORTHO05D006184 4.3e-11 72.8 145 26.9
TPR.G30402 Trifolium pratense HOM05D000085 ORTHO05D006184 7.3e-11 72.0 210 22.4
Actinidia24490 Actinidia chinensis HOM05D000085 ORTHO05D006184 9.6e-11 71.6 170 27.6
AagrBONN_evm.TU.Sc2ySwM_117.1414 Anthoceros agrestis HOM05D016224 ORTHO05D010508 9.6e-11 71.6 237 25.7
AagrBONN_evm.TU.Sc2ySwM_117.1415 Anthoceros agrestis HOM05D016224 ORTHO05D010508 9.6e-11 71.6 166 30.1
Lj3g0006871 Lotus japonicus HOM05D000085 ORTHO05D006184 9.6e-11 71.6 201 24.4
MBI19_g24735_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D006184 1.6e-10 70.9 170 24.1
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.6e-10 70.9 171 28.1
Duzib114G0039 Durio zibethinus HOM05D000085 ORTHO05D006184 2.1e-10 70.5 260 24.2
Prupe.2G050000 Prunus persica HOM05D000085 ORTHO05D006184 2.1e-10 70.5 111 30.6
PGR031G0712 Punica granatum HOM05D000085 ORTHO05D006184 2.1e-10 70.5 173 26.0
VMungo0647G1792 Vigna mungo HOM05D000085 ORTHO05D006184 2.1e-10 70.5 159 22.6
CiPaw.15G024100 Carya illinoinensis HOM05D000085 ORTHO05D009791 2.8e-10 70.1 138 34.1
RcHm_v2.0_Chr7g0209801 Rosa chinensis HOM05D008363 ORTHO05D010508 3.6e-10 69.7 211 25.1
Potri.001G224800 Populus trichocarpa HOM05D000085 ORTHO05D006184 8.1e-10 68.6 159 23.9
FAN18G1001 Fragaria x ananassa HOM05D008363 ORTHO05D010508 1.1e-09 68.2 213 23.9
FvH4_5g22141 Fragaria vesca HOM05D008363 ORTHO05D010508 1.4e-09 67.8 213 23.9
FAN04G2847 Fragaria x ananassa HOM05D008363 ORTHO05D010508 1.4e-09 67.8 187 23.0
FAN10G2237 Fragaria x ananassa HOM05D000085 ORTHO05D006184 1.4e-09 67.8 136 28.7
FAN13G1991 Fragaria x ananassa HOM05D008363 ORTHO05D010508 1.4e-09 67.8 187 23.0
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.4e-09 67.8 189 28.6
Duzib168G1166 Durio zibethinus HOM05D000085 ORTHO05D006184 1.8e-09 67.4 169 22.5
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.8e-09 67.4 214 23.4
Ca_13661_v3 Cicer arietinum L. HOM05D000085 ORTHO05D015977 2.4e-09 67.0 159 24.5
Ca_13663_v3 Cicer arietinum L. HOM05D000085 ORTHO05D015977 2.4e-09 67.0 159 24.5
Haze_17673 Corylus avellana HOM05D000085 ORTHO05D009791 3.1e-09 66.6 97 42.3
FAN08G0799 Fragaria x ananassa HOM05D008363 ORTHO05D010508 3.1e-09 66.6 187 23.0
Medtr0205s0040 Medicago truncatula HOM05D000085 ORTHO05D015977 3.1e-09 66.6 159 24.5
Pp3c12_23140 Physcomitrium patens HOM05D016224 ORTHO05D023076 1.2e-08 64.7 151 24.5
TPR.G16401 Trifolium pratense HOM05D000085 ORTHO05D006184 1.2e-08 64.7 151 24.5
Manes.01G176300 Manihot esculenta HOM05D000085 ORTHO05D006184 1.5e-08 64.3 198 22.7
AagrBONN_evm.TU.Sc2ySwM_344.1186 Anthoceros agrestis HOM05D008363 ORTHO05D010508 2.0e-08 63.9 129 29.5
Gohir.A07G036650 Gossypium hirsutum HOM05D000085 ORTHO05D006184 2.0e-08 63.9 169 23.1
Phvul.008G204900 Phaseolus vulgaris HOM05D000085 ORTHO05D006184 2.0e-08 63.9 159 21.4
Gorai.001G043200 Gossypium raimondii HOM05D000085 ORTHO05D006184 3.4e-08 63.2 169 23.1
Thecc.09G256900 Theobroma cacao HOM05D000085 ORTHO05D006184 3.4e-08 63.2 225 24.4
Dinv03741 Davidia involucrata HOM05D000085 ORTHO05D006184 9.9e-08 61.6 110 27.3
Medtr4g128180 Medicago truncatula HOM05D000085 ORTHO05D006184 9.9e-08 61.6 152 25.0
Pp3c24_19020 Physcomitrium patens HOM05D026724 ORTHO05D026055 9.9e-08 61.6 131 27.5
Pp3c17_19290 Physcomitrium patens HOM05D000085 ORTHO05D001756 1.3e-07 61.2 176 22.7
arahy.Tifrunner.gnm1.ann1.F9JT0R Arachis hypogaea HOM05D000085 ORTHO05D006184 1.7e-07 60.8 172 24.4
MD02G1269800 Malus domestica HOM05D000085 ORTHO05D006184 1.7e-07 60.8 169 26.0
Prupe.5G035100 Prunus persica HOM05D008363 ORTHO05D010508 2.2e-07 60.5 170 24.7
arahy.Tifrunner.gnm1.ann1.RDL00W Arachis hypogaea HOM05D000085 ORTHO05D006184 2.9e-07 60.1 172 24.4
MBI19_g24736_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D006184 6.4e-07 58.9 169 26.0
Psat0s2703g0120 Pisum sativum HOM05D000085 ORTHO05D006184 6.4e-07 58.9 152 24.3
Psat5g226720 Pisum sativum HOM05D000085 ORTHO05D006184 6.4e-07 58.9 149 26.2
PGR044G1040 Punica granatum HOM05D000085 ORTHO05D006184 8.4e-07 58.5 128 23.4
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.1e-06 58.2 207 21.7
MBI09_g12163_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D011292 1.9e-06 57.4 138 28.3
Psat5g190960 Pisum sativum HOM05D000085 ORTHO05D015977 1.9e-06 57.4 102 29.4
VMungo1080G0919 Vigna mungo HOM05D000085 ORTHO05D006184 1.9e-06 57.4 213 21.1
Dinv03760 Davidia involucrata HOM05D000085 ORTHO05D006184 4.2e-06 56.2 119 23.5
LjContig00564g0025361 Lotus japonicus HOM05D000085 ORTHO05D006184 4.2e-06 56.2 155 22.6
Pp3c3_13770 Physcomitrium patens HOM05D026724 ORTHO05D020966 5.4e-06 55.8 160 28.1
ATR0584G019 Amborella trichopoda HOM05D000085 ORTHO05D011292 7.1e-06 55.5 101 31.7
TPR.G11965 Trifolium pratense HOM05D000085 ORTHO05D015977 7.1e-06 55.5 102 27.5
GSVIVG01022918001 Vitis vinifera HOM05D000085 ORTHO05D011292 7.1e-06 55.5 85 32.9
Oeu013040.1 Olea europaea HOM05D000085 ORTHO05D006184 9.3e-06 55.1 155 25.2


User provided reference genes

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