Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.4e-240 835.9 438 100.0
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 2.3e-169 599.4 366 79.8
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 9.9e-165 583.9 371 76.0
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 6.4e-164 581.3 369 73.4
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 6.4e-164 581.3 426 70.0
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 6.4e-164 581.3 364 75.8
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 1.1e-160 570.5 416 67.3
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 1.9e-160 569.7 427 69.1
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 2.8e-159 565.8 439 64.9
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 2.8e-159 565.8 439 64.9
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 6.2e-159 564.7 369 73.7
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 6.9e-158 561.2 363 74.7
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.5e-157 560.1 390 69.7
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 2.9e-156 555.8 372 71.8
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 4.9e-156 555.1 428 63.3
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 6.4e-156 554.7 368 72.0
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 5.5e-155 551.6 369 71.5
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.7e-154 549.3 421 62.9
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 3.5e-154 548.9 421 62.9
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 4.6e-154 548.5 368 71.5
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.0e-153 547.4 391 69.3
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.3e-153 547.0 373 71.8
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 6.7e-153 544.7 369 71.5
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 6.7e-153 544.7 364 71.7
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 6.7e-153 544.7 419 62.8
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 8.7e-153 544.3 394 66.5
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 1.5e-152 543.5 372 69.6
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 7.4e-152 541.2 361 71.5
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 9.6e-152 540.8 366 70.2
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 1.3e-151 540.4 439 63.6
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 1.6e-151 540.0 367 71.4
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 2.8e-151 539.3 367 70.6
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 3.7e-151 538.9 372 69.6
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 3.7e-151 538.9 367 70.8
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 3.7e-151 538.9 367 70.0
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 4.8e-151 538.5 364 71.2
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 6.2e-151 538.1 360 71.7
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 6.2e-151 538.1 369 69.4
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 8.2e-151 537.7 365 69.9
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.1e-150 537.3 364 70.3
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.4e-150 537.0 372 69.4
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.4e-150 537.0 364 70.3
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 1.8e-150 536.6 369 71.0
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.8e-150 536.6 364 70.1
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 2.4e-150 536.2 364 70.9
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 2.4e-150 536.2 441 62.6
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 3.1e-150 535.8 369 70.5
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 3.1e-150 535.8 415 64.6
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 4.0e-150 535.4 369 70.7
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 6.9e-150 534.6 364 71.7
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 9.0e-150 534.3 367 70.3
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.5e-149 533.5 372 69.6
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 3.4e-149 532.3 359 70.5
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 6.5e-148 528.1 362 71.0
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 8.4e-148 527.7 353 72.2
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 5.5e-147 525.0 381 66.4
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 9.3e-147 524.2 364 69.5
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 1.3e-145 520.4 346 70.8
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 2.3e-145 519.6 343 71.7
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 2.3e-145 519.6 373 68.4
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.1e-144 517.3 357 70.3
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 3.3e-144 515.8 369 67.5
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.4e-142 510.4 412 62.9
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.8e-142 510.0 358 68.4
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 2.4e-142 509.6 381 66.4
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 4.1e-142 508.8 471 57.3
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 7.7e-141 504.6 378 64.8
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 6.5e-140 501.5 381 65.6
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.6e-138 495.4 444 59.5
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 7.9e-138 494.6 387 64.1
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 3.9e-137 492.3 364 67.3
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.5e-136 490.3 365 66.3
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 4.3e-136 488.8 313 74.4
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 2.8e-135 486.1 406 61.8
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 3.7e-135 485.7 352 67.9
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 1.1e-134 484.2 423 58.4
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 5.3e-134 481.9 406 61.3
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.0e-133 479.9 355 64.8
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 5.9e-133 478.4 358 65.1
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.3e-132 477.2 363 65.8
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 7.0e-126 454.9 356 63.5
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 3.5e-125 452.6 358 61.2
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 2.2e-124 449.9 330 66.4
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 7.0e-118 428.3 281 73.0
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 3.0e-113 412.9 434 51.6
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 2.0e-112 410.2 369 58.3
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 2.7e-109 399.8 357 55.7
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 8.5e-108 394.8 346 55.8
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 7.7e-101 371.7 333 53.2
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.1e-98 362.1 405 50.9
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 2.0e-96 357.1 371 52.3
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 2.6e-96 356.7 239 72.4
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 9.8e-96 354.8 239 71.5
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 2.0e-88 330.5 286 58.7
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 6.6e-84 315.5 315 53.0
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 2.8e-66 256.9 375 39.5
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.1e-62 245.0 352 42.0
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.1e-49 201.8 127 73.2
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 4.5e-48 196.4 128 72.7
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.4e-41 174.1 183 50.8
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 9.0e-41 172.2 151 60.9
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 2.5e-38 164.1 108 70.4
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.3e-26 125.2 125 52.8
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 6.3e-26 122.9 79 65.8
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 5.3e-25 119.8 112 51.8
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 4.5e-24 116.7 169 41.4
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 8.5e-23 112.5 375 26.4
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 5.5e-22 109.8 122 52.5
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 2.3e-20 104.4 60 80.0
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 6.3e-18 96.3 223 31.4
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.8e-17 94.7 77 59.7
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.7e-15 88.2 99 44.4
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 5.5e-14 83.2 63 69.8
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 2.1e-13 81.3 52 75.0
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 2.3e-12 77.8 322 23.9
HanXRQChr15g0470421 Helianthus annuus HOM05D004784 ORTHO05D005762 6.7e-12 76.3 344 25.0
GSVIVG01012702001 Vitis vinifera HOM05D004784 ORTHO05D005762 8.8e-12 75.9 304 24.3
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 1.1e-11 75.5 176 30.7
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 1.3e-07 62.0 34 76.5


User provided reference genes

Program Settings