Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 3.9e-57 224.6 112 100.0
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 1.2e-42 176.4 103 77.7
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 2.7e-42 175.3 103 75.7
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 2.7e-42 175.3 103 75.7
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 7.9e-42 173.7 109 73.4
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 1.3e-41 172.9 108 73.1
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 2.3e-41 172.2 104 75.0
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 6.7e-41 170.6 104 75.0
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 1.1e-40 169.9 100 76.0
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 1.1e-40 169.9 112 70.5
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 1.1e-40 169.9 98 78.6
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 3.3e-40 168.3 112 68.8
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 3.3e-40 168.3 112 74.1
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 5.7e-40 167.5 112 68.8
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 9.7e-40 166.8 105 68.6
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 2.2e-39 165.6 106 67.0
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.2e-39 165.6 109 69.7
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 2.8e-39 165.2 101 76.2
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 4.8e-39 164.5 112 66.1
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 4.8e-39 164.5 105 72.4
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 6.3e-39 164.1 103 70.9
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 6.3e-39 164.1 102 71.6
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 6.3e-39 164.1 108 70.4
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 8.2e-39 163.7 109 68.8
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.1e-38 163.3 114 68.4
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.1e-38 163.3 106 70.8
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 1.4e-38 162.9 117 66.7
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.4e-38 162.9 112 69.6
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 1.8e-38 162.5 106 69.8
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 1.8e-38 162.5 109 69.7
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 2.4e-38 162.2 112 66.1
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 2.4e-38 162.2 109 68.8
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 3.1e-38 161.8 108 68.5
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 3.1e-38 161.8 111 70.3
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 3.1e-38 161.8 109 69.7
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 3.1e-38 161.8 99 73.7
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 4.1e-38 161.4 105 71.4
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 4.1e-38 161.4 102 68.6
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 4.1e-38 161.4 103 71.8
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 6.9e-38 160.6 106 68.9
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.2e-37 159.8 108 71.3
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.5e-37 159.5 103 69.9
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.5e-37 159.5 97 76.3
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 2.0e-37 159.1 107 68.2
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 2.0e-37 159.1 97 75.3
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 2.6e-37 158.7 111 65.8
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 2.6e-37 158.7 107 68.2
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.6e-37 158.7 125 60.0
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 2.6e-37 158.7 103 68.9
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 3.4e-37 158.3 107 67.3
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 3.4e-37 158.3 107 67.3
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 4.5e-37 157.9 111 65.8
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.0e-36 156.8 116 68.1
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 1.3e-36 156.4 95 73.7
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 1.3e-36 156.4 95 73.7
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 1.3e-36 156.4 95 73.7
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 1.3e-36 156.4 111 66.7
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.3e-36 156.4 112 67.0
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 1.7e-36 156.0 99 72.7
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 2.2e-36 155.6 97 74.2
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 2.2e-36 155.6 110 67.3
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 2.9e-36 155.2 99 70.7
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 2.9e-36 155.2 108 66.7
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 3.8e-36 154.8 107 66.4
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 5.0e-36 154.5 108 71.3
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 6.5e-36 154.1 101 69.3
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 8.5e-36 153.7 106 68.9
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 8.5e-36 153.7 107 67.3
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 1.1e-35 153.3 113 66.4
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 1.1e-35 153.3 107 65.4
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 1.1e-35 153.3 104 68.3
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 1.4e-35 152.9 112 62.5
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.4e-35 152.9 111 63.1
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 1.9e-35 152.5 100 68.0
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 4.2e-35 151.4 111 64.0
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 1.2e-34 149.8 94 71.3
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.6e-34 149.4 98 70.4
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 1.6e-34 149.4 109 62.4
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 3.6e-34 148.3 112 63.4
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 1.0e-33 146.7 97 69.1
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.4e-33 146.4 109 63.3
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 2.3e-33 145.6 101 66.3
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 3.0e-33 145.2 105 66.7
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 5.1e-33 144.4 107 63.6
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 8.8e-33 143.7 102 65.7
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 8.8e-33 143.7 106 63.2
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 2.0e-32 142.5 106 63.2
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 2.6e-32 142.1 107 62.6
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.6e-32 142.1 106 63.2
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 4.4e-32 141.4 141 51.8
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.3e-31 139.8 102 64.7
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 2.8e-31 138.7 102 63.7
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 4.8e-31 137.9 102 64.7
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 4.8e-31 137.9 102 64.7
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 2.4e-30 135.6 109 60.6
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 3.1e-30 135.2 102 63.7
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 6.5e-28 127.5 83 69.9
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.1e-27 126.7 85 69.4
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 2.5e-27 125.6 68 83.8
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 1.2e-26 123.2 106 51.9
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 2.1e-26 122.5 80 70.0
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 2.1e-26 122.5 80 71.2
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 2.1e-26 122.5 68 82.4
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.5e-24 116.3 82 67.1
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 5.3e-22 107.8 64 76.6
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 2.0e-21 105.9 115 45.2
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 3.5e-21 105.1 67 76.1
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 3.5e-21 105.1 112 51.8
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 7.7e-21 104.0 116 44.8
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 2.9e-20 102.1 79 63.3
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 1.9e-19 99.4 93 46.2
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 9.4e-19 97.1 106 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 1.5e-16 89.7 103 44.7
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 1.3e-15 86.7 62 58.1
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 2.0e-13 79.3 61 60.7
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.7e-13 79.0 103 45.6
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 8.5e-12 73.9 63 60.3
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 1.1e-11 73.6 68 47.1


User provided reference genes

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