Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00224 Aquilegia oxysepala HOM05D048085 ORTHO05D038488 2.3e-90 335.5 162 100.0
Aqoxy6G00174 Aquilegia oxysepala HOM05D048085 ORTHO05D038488 1.1e-84 316.6 152 100.0
BolC1t01155H Brassica oleracea HOM05D000327 ORTHO05D000218 8.3e-16 87.8 101 37.6
CANSAT54G2823 Cannabis sativa HOM05D000327 ORTHO05D000218 8.5e-13 77.8 116 30.2
AagrBONN_evm.TU.Sc2ySwM_344.4279 Anthoceros agrestis HOM05D000327 ORTHO05D000218 1.9e-12 76.6 114 32.5
BcaC09g51565 Brassica carinata HOM05D000327 ORTHO05D000218 1.9e-12 76.6 96 36.5
AagrBONN_evm.TU.Sc2ySwM_228.1024 Anthoceros agrestis HOM05D000327 ORTHO05D000218 2.5e-12 76.3 106 34.0
Carub.0007s3273 Capsella rubella HOM05D000327 ORTHO05D000218 4.2e-12 75.5 91 36.3
Pp3c5_8660 Physcomitrium patens HOM05D000327 ORTHO05D000218 5.5e-12 75.1 106 34.0
Medtr5g078410 Medicago truncatula HOM05D000327 ORTHO05D000218 1.2e-11 73.9 80 37.5
vmacro19089 Vaccinium macrocarpon HOM05D000327 ORTHO05D000218 1.2e-11 73.9 109 30.3
HanXRQChr02g0051341 Helianthus annuus HOM05D000327 ORTHO05D000218 3.6e-11 72.4 93 31.2
Psat5g161880 Pisum sativum HOM05D000327 ORTHO05D000218 3.6e-11 72.4 99 31.3
Pp3c3_13290 Physcomitrium patens HOM05D000327 ORTHO05D000218 4.7e-11 72.0 106 29.2
TPR.G5490 Trifolium pratense HOM05D000327 ORTHO05D000218 4.7e-11 72.0 98 31.6
Gohir.A05G142700 Gossypium hirsutum HOM05D000327 ORTHO05D000218 6.1e-11 71.6 102 30.4
Medtr8g022900 Medicago truncatula HOM05D000327 ORTHO05D000218 6.1e-11 71.6 100 33.0
QL01p037042 Quercus lobata HOM05D000327 ORTHO05D000218 6.1e-11 71.6 94 33.0
Medtr3g462590 Medicago truncatula HOM05D000327 ORTHO05D000218 1.0e-10 70.9 99 31.3
PGR042G2262 Punica granatum HOM05D000327 ORTHO05D000218 1.0e-10 70.9 88 31.8
Carub.0005s0923 Capsella rubella HOM05D000327 ORTHO05D000218 1.4e-10 70.5 95 30.5
Cre01.g060712 Chlamydomonas reinhardtii HOM05D000327 ORTHO05D000218 1.4e-10 70.5 97 38.1
Gohir.D05G145100 Gossypium hirsutum HOM05D000327 ORTHO05D000218 1.4e-10 70.5 97 29.9
Gorai.009G149000 Gossypium raimondii HOM05D000327 ORTHO05D000218 1.4e-10 70.5 97 29.9
SalBow2G1534 Salvia bowleyana HOM05D000327 ORTHO05D000218 1.4e-10 70.5 95 31.6
BraA09t40207Z Brassica rapa HOM05D000327 ORTHO05D000218 2.3e-10 69.7 94 28.7
Carub.0008s2193 Capsella rubella HOM05D000327 ORTHO05D000218 2.3e-10 69.7 95 31.6
FvH4_6g35700 Fragaria vesca HOM05D000327 ORTHO05D000218 2.3e-10 69.7 86 36.0
Peaxi162Scf00623g00313 Petunia axillaris HOM05D000327 ORTHO05D000218 4.0e-10 68.9 130 29.2
AL4G20390 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 5.2e-10 68.6 95 29.5
AT2G19610 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 5.2e-10 68.6 111 27.0
BcaC05g24758 Brassica carinata HOM05D000327 ORTHO05D000218 5.2e-10 68.6 105 26.7
BcaC09g51577 Brassica carinata HOM05D000327 ORTHO05D000218 5.2e-10 68.6 109 26.6
C05p07080 Brassica napus HOM05D000327 ORTHO05D000218 5.2e-10 68.6 105 26.7
BolC1t01153H Brassica oleracea HOM05D000327 ORTHO05D000218 5.2e-10 68.6 109 26.6
BolC5t29463H Brassica oleracea HOM05D000327 ORTHO05D000218 5.2e-10 68.6 105 26.7
Duzib235G0628 Durio zibethinus HOM05D000327 ORTHO05D000218 6.8e-10 68.2 97 30.9
Lj4P746T53 Lonicera japonica HOM05D000327 ORTHO05D000218 6.8e-10 68.2 86 33.7
Medtr3g462430 Medicago truncatula HOM05D000327 ORTHO05D000218 6.8e-10 68.2 94 30.9
TPR.G16665 Trifolium pratense HOM05D000327 ORTHO05D000218 6.8e-10 68.2 83 36.1
A06p05870 Brassica napus HOM05D000327 ORTHO05D000218 8.8e-10 67.8 105 26.7
A09p47490 Brassica napus HOM05D000327 ORTHO05D000218 8.8e-10 67.8 94 27.7
BraA06t23796Z Brassica rapa HOM05D000327 ORTHO05D000218 8.8e-10 67.8 105 26.7
CARHR108310 Cardamine hirsuta HOM05D000327 ORTHO05D000218 1.2e-09 67.4 95 29.5
CSS0001137 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 1.5e-09 67.0 93 32.3
CDE02G2449 Ceratophyllum demersum HOM05D000327 ORTHO05D000218 1.5e-09 67.0 96 31.2
Sc10g0007990 Simmondsia chinensis HOM05D000327 ORTHO05D000218 1.5e-09 67.0 80 33.8
MD11G1126100 Malus domestica HOM05D000327 ORTHO05D000218 2.0e-09 66.6 96 31.2
Medtr3g462570 Medicago truncatula HOM05D000327 ORTHO05D000218 2.0e-09 66.6 83 32.5
Haze_27075 Corylus avellana HOM05D000554 ORTHO05D000860 2.6e-09 66.2 85 32.9
TPR.G13281 Trifolium pratense HOM05D000327 ORTHO05D000218 2.6e-09 66.2 84 34.5
Medtr3g462530 Medicago truncatula HOM05D000327 ORTHO05D000218 3.4e-09 65.9 83 32.5
CSS0019539 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 4.4e-09 65.5 97 28.9
Lalb_Chr18g0050641 Lupinus albus HOM05D000327 ORTHO05D000218 4.4e-09 65.5 85 30.6
Lalb_Chr18g0050651 Lupinus albus HOM05D000327 ORTHO05D000218 4.4e-09 65.5 92 28.3
Sabra18G0057100 Salix brachista HOM05D000327 ORTHO05D000218 5.7e-09 65.1 88 31.8
BcaB07g34122 Brassica carinata HOM05D000327 ORTHO05D000218 7.5e-09 64.7 93 29.0
Duzib160G0693 Durio zibethinus HOM05D000327 ORTHO05D000218 7.5e-09 64.7 86 31.4
CSS0040853 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 9.8e-09 64.3 91 29.7
SGA_v2.0_scaffold152G36894 Striga asiatica HOM05D000327 ORTHO05D000218 9.8e-09 64.3 98 27.6
Lj6g0009413 Lotus japonicus HOM05D000327 ORTHO05D000218 1.3e-08 63.9 83 32.5
MD15G1224100 Malus domestica HOM05D000327 ORTHO05D000218 1.3e-08 63.9 91 36.3
HPP92_028555 Vanilla planifolia HOM05D000327 ORTHO05D000218 1.3e-08 63.9 96 30.2
ATR0099G055 Amborella trichopoda HOM05D000327 ORTHO05D000218 1.7e-08 63.5 89 30.3
Nitab4.5_0009829g0030 Nicotiana tabacum HOM05D000327 ORTHO05D000218 2.2e-08 63.2 97 32.0
Peaxi162Scf00016g00353 Petunia axillaris HOM05D000327 ORTHO05D000218 2.2e-08 63.2 91 31.9
Rhsim06G0067700 Rhododendron simsii HOM05D000327 ORTHO05D000218 2.2e-08 63.2 93 28.0
FAN14G5670 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.8e-08 62.8 71 36.6
arahy.Tifrunner.gnm1.ann1.NE9TLW Arachis hypogaea HOM05D000327 ORTHO05D000218 3.7e-08 62.4 82 30.5
Migut.L01597 Erythranthe guttata HOM05D000327 ORTHO05D000218 3.7e-08 62.4 82 34.1
Lsat_1_v5_gn_1_38601 Lactuca sativa HOM05D000327 ORTHO05D000218 3.7e-08 62.4 94 29.8
SMO361G0501 Selaginella moellendorffii HOM05D000327 ORTHO05D000218 3.7e-08 62.4 93 28.0
TPR.G5489 Trifolium pratense HOM05D000327 ORTHO05D000218 4.9e-08 62.0 82 34.1
Actinidia29642 Actinidia chinensis HOM05D000327 ORTHO05D000218 6.3e-08 61.6 84 32.1
ATR0099G091 Amborella trichopoda HOM05D000327 ORTHO05D000218 6.3e-08 61.6 72 33.3
Migut.N02823 Erythranthe guttata HOM05D000327 ORTHO05D000218 8.3e-08 61.2 86 32.6
Lj3g0011460 Lotus japonicus HOM05D000327 ORTHO05D000218 8.3e-08 61.2 82 30.5
CSS0017647 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 1.4e-07 60.5 88 29.5
CSS0040326 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 1.4e-07 60.5 88 29.5
CBR_g36669 Chara braunii HOM05D000554 ORTHO05D000860 1.4e-07 60.5 80 36.2
Glyma.07G044500 Glycine max HOM05D000327 ORTHO05D000218 1.4e-07 60.5 82 30.5
Medtr5g062990 Medicago truncatula HOM05D000327 ORTHO05D000218 1.4e-07 60.5 77 32.5
Oeu055324.1 Olea europaea HOM05D000327 ORTHO05D000218 1.4e-07 60.5 89 29.2
MD02G1103400 Malus domestica HOM05D000327 ORTHO05D000218 1.8e-07 60.1 82 34.1
Potri.018G064400 Populus trichocarpa HOM05D000327 ORTHO05D000218 1.8e-07 60.1 82 31.7
Sp4g07320 Schrenkiella parvula HOM05D000327 ORTHO05D000218 1.8e-07 60.1 92 30.4
TPR.G28739 Trifolium pratense HOM05D000327 ORTHO05D000218 1.8e-07 60.1 81 32.1
AUR62001417 Chenopodium quinoa HOM05D000327 ORTHO05D000218 2.4e-07 59.7 77 31.2
Ciclev10003456m.g Citrus clementina HOM05D000327 ORTHO05D000218 2.4e-07 59.7 82 29.3
Ciclev10010298m.g Citrus clementina HOM05D000327 ORTHO05D000218 2.4e-07 59.7 70 34.3
FAN02G3618 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.4e-07 59.7 71 35.2
FAN09G1662 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.4e-07 59.7 71 35.2
FAN05G1472 Fragaria x ananassa HOM05D000327 ORTHO05D000218 3.1e-07 59.3 71 35.2
TPR.G18149 Trifolium pratense HOM05D000327 ORTHO05D000218 3.1e-07 59.3 95 28.4
Eucgr.I02157 Eucalyptus grandis HOM05D000327 ORTHO05D000218 4.1e-07 58.9 85 32.9
Medtr2g038640 Medicago truncatula HOM05D000327 ORTHO05D000218 4.1e-07 58.9 72 33.3
AUR62009952 Chenopodium quinoa HOM05D000327 ORTHO05D000218 5.4e-07 58.5 77 29.9
AUR62009953 Chenopodium quinoa HOM05D000327 ORTHO05D000218 5.4e-07 58.5 77 29.9
AUR62025578 Chenopodium quinoa HOM05D000327 ORTHO05D000218 5.4e-07 58.5 77 29.9
Manes.03G045200 Manihot esculenta HOM05D000327 ORTHO05D000218 5.4e-07 58.5 88 28.4
RcHm_v2.0_Chr2g0147691 Rosa chinensis HOM05D000327 ORTHO05D000218 5.4e-07 58.5 71 33.8
PSO478G1080 Papaver somniferum HOM05D000327 ORTHO05D000218 7.0e-07 58.2 103 30.1
BcaB08g36727 Brassica carinata HOM05D000327 ORTHO05D000218 9.2e-07 57.8 92 31.5
AT2G21420 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 1.2e-06 57.4 79 34.2
Haze_26637 Corylus avellana HOM05D000554 ORTHO05D000860 1.2e-06 57.4 93 33.3
Nitab4.5_0002507g0010 Nicotiana tabacum HOM05D000327 ORTHO05D000218 1.2e-06 57.4 94 26.6
Lj1C184T3 Lonicera japonica HOM05D000327 ORTHO05D000218 1.6e-06 57.0 92 33.7
Os09g0435250 Oryza sativa ssp. japonica HOM05D000327 ORTHO05D000218 1.6e-06 57.0 99 25.3
ATR0099G045 Amborella trichopoda HOM05D000327 ORTHO05D000218 2.7e-06 56.2 81 29.6
FAN19G2624 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.7e-06 56.2 85 32.9
FAN26G1720 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.7e-06 56.2 85 32.9
FAN26G2072 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.7e-06 56.2 85 32.9
FAN28G0018 Fragaria x ananassa HOM05D000327 ORTHO05D000218 2.7e-06 56.2 79 32.9
Medtr3g462560 Medicago truncatula HOM05D000327 ORTHO05D000218 3.5e-06 55.8 75 30.7
PSO339G0473 Papaver somniferum HOM05D000327 ORTHO05D000218 3.5e-06 55.8 92 30.4
AL8G36690 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 4.5e-06 55.5 82 30.5
Lj6g0026576 Lotus japonicus HOM05D000327 ORTHO05D000218 4.5e-06 55.5 69 36.2
VMungo0331G0791 Vigna mungo HOM05D000327 ORTHO05D000218 4.5e-06 55.5 71 32.4
arahy.Tifrunner.gnm1.ann1.UF47DQ Arachis hypogaea HOM05D000327 ORTHO05D000218 5.9e-06 55.1 87 28.7
Medtr4g063815 Medicago truncatula HOM05D000327 ORTHO05D000218 5.9e-06 55.1 82 30.5
EL10Ac7g16482 Beta vulgaris HOM05D000327 ORTHO05D000218 7.7e-06 54.7 77 29.9
AUR62026345 Chenopodium quinoa HOM05D000327 ORTHO05D000218 7.7e-06 54.7 85 31.8
Mapoly0058s0100 Marchantia polymorpha HOM05D000327 ORTHO05D000218 7.7e-06 54.7 83 32.5
PSO541G3041 Papaver somniferum HOM05D000327 ORTHO05D000218 7.7e-06 54.7 115 27.8
TPR.G18160 Trifolium pratense HOM05D000327 ORTHO05D000218 7.7e-06 54.7 76 28.9


User provided reference genes

Program Settings