Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 3.1e-190 668.3 340 100.0
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 6.3e-183 644.0 340 97.9
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 4.8e-106 388.7 336 63.7
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 2.4e-105 386.3 337 62.9
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 4.4e-104 382.1 325 64.0
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 2.9e-103 379.4 337 61.4
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 5.4e-102 375.2 336 62.2
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 9.3e-102 374.4 338 60.7
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 2.1e-101 373.2 346 61.3
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 2.7e-101 372.9 343 62.4
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 3.5e-101 372.5 339 60.5
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 4.6e-101 372.1 340 62.6
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 4.6e-101 372.1 337 60.5
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 1.0e-100 370.9 322 62.4
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 2.3e-100 369.8 343 60.9
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 3.9e-100 369.0 328 63.1
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 3.9e-100 369.0 345 60.6
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 3.3e-99 365.9 321 63.2
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.1e-97 360.9 337 60.2
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 1.1e-97 360.9 337 59.3
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 2.4e-97 359.8 349 59.0
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 2.4e-94 349.7 312 62.5
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 2.1e-93 346.7 341 58.1
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 2.7e-93 346.3 332 59.6
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 1.0e-92 344.4 322 60.9
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 1.8e-92 343.6 329 60.5
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 3.0e-92 342.8 329 57.8
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 3.9e-92 342.4 322 59.6
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 3.9e-92 342.4 328 57.6
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 6.7e-92 341.7 368 54.3
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 8.7e-92 341.3 368 54.3
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.5e-91 339.7 311 61.1
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 2.5e-91 339.7 329 59.9
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 3.3e-91 339.3 336 57.7
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 5.6e-91 338.6 311 60.8
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 7.4e-91 338.2 351 58.7
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 1.6e-90 337.0 332 59.3
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.1e-90 336.7 311 60.5
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 2.8e-90 336.3 346 57.5
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 3.7e-90 335.9 349 55.0
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 3.7e-90 335.9 346 57.2
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 4.8e-90 335.5 311 60.1
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.1e-89 334.3 342 56.7
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 1.4e-89 334.0 369 53.9
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 1.4e-89 334.0 336 59.8
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 5.3e-89 332.0 330 57.9
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 5.3e-89 332.0 311 60.1
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 9.0e-89 331.3 311 60.5
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 1.2e-88 330.9 337 57.3
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 2.0e-88 330.1 342 58.2
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.0e-88 330.1 338 58.3
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 4.5e-88 328.9 342 58.2
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 4.5e-88 328.9 346 57.5
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 5.8e-88 328.6 347 55.0
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 5.8e-88 328.6 315 58.7
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 7.6e-88 328.2 315 59.0
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 7.6e-88 328.2 329 58.7
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 1.3e-87 327.4 319 56.4
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.9e-87 326.2 321 59.2
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.9e-87 326.2 338 57.7
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 3.8e-87 325.9 343 57.4
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 4.9e-87 325.5 331 56.8
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 1.1e-86 324.3 331 58.0
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 2.5e-86 323.2 331 56.5
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 4.2e-86 322.4 330 55.8
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 7.1e-86 321.6 340 52.9
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 1.2e-85 320.9 328 53.7
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 1.2e-85 320.9 324 58.3
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 3.5e-85 319.3 330 54.5
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 4.6e-85 318.9 337 54.9
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 7.9e-85 318.2 321 55.8
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.0e-84 317.8 318 59.1
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 1.8e-84 317.0 321 55.8
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 2.3e-84 316.6 345 53.9
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 3.0e-84 316.2 327 54.7
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 3.3e-83 312.8 339 53.1
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 7.4e-83 311.6 337 54.0
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 1.3e-82 310.8 331 56.8
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 1.3e-82 310.8 323 56.0
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 8.2e-82 308.1 337 57.0
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 2.4e-81 306.6 339 56.3
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 3.1e-81 306.2 333 53.5
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 3.1e-81 306.2 348 51.7
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 4.1e-81 305.8 341 55.4
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 5.3e-81 305.4 335 52.5
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 6.9e-81 305.1 284 60.6
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 9.0e-81 304.7 333 52.9
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 9.0e-81 304.7 344 52.0
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 1.2e-80 304.3 329 52.9
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 1.2e-80 304.3 321 55.5
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 1.5e-80 303.9 304 58.9
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 5.8e-80 302.0 334 53.0
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 1.0e-79 301.2 342 52.3
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.7e-79 300.4 336 53.3
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 3.8e-79 299.3 335 51.9
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 6.5e-79 298.5 348 51.7
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 6.5e-79 298.5 303 57.8
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 8.4e-79 298.1 334 53.3
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 2.5e-78 296.6 339 52.8
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 3.2e-78 296.2 333 52.3
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 3.2e-78 296.2 342 51.5
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 1.2e-77 294.3 341 50.1
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 1.2e-77 294.3 366 50.3
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 2.1e-77 293.5 334 52.4
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 2.1e-77 293.5 329 54.1
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 2.7e-77 293.1 332 52.4
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 2.7e-77 293.1 332 52.4
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 3.5e-77 292.7 347 52.4
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 1.0e-76 291.2 338 53.6
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 1.0e-76 291.2 346 49.1
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.8e-76 290.4 338 53.3
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 1.8e-76 290.4 325 52.0
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 3.0e-76 289.7 348 50.6
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 8.7e-76 288.1 355 49.9
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 1.5e-75 287.3 336 52.4
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 2.5e-75 286.6 355 49.6
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 4.3e-75 285.8 370 48.4
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 4.3e-75 285.8 258 63.6
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 5.7e-75 285.4 345 51.0
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 1.6e-74 283.9 318 55.7
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 1.2e-72 277.7 339 52.8
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 5.9e-72 275.4 341 48.7
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 7.7e-72 275.0 344 48.5
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 2.9e-71 273.1 357 48.5
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 2.9e-71 273.1 262 58.0
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 1.1e-70 271.2 335 51.0
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.2e-69 267.7 300 54.7
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 3.9e-68 262.7 308 52.3
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 8.2e-66 255.0 346 46.2
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 4.1e-65 252.7 335 48.1
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 6.5e-63 245.4 342 47.7
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 1.8e-60 237.3 352 45.5
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.8e-57 227.3 338 43.8
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.8e-57 227.3 338 43.8
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.2e-56 224.6 350 43.4
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 4.2e-54 216.1 199 58.8
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 1.8e-52 210.7 357 39.8
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 1.0e-47 194.9 336 42.6
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 8.5e-47 191.8 242 48.3
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 2.0e-43 180.6 139 69.1
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 4.5e-40 169.5 227 47.1
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 4.7e-37 159.5 251 41.0
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 2.3e-31 140.6 120 64.2
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 2.3e-28 130.6 200 45.5
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 2.2e-26 124.0 85 71.8
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.8e-25 120.9 181 47.0
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 8.6e-23 112.1 79 69.6
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 2.6e-19 100.5 70 71.4
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 5.0e-15 86.3 60 73.3
ATR0561G103 Amborella trichopoda HOM05D003782 ORTHO05D004361 8.6e-15 85.5 138 44.2
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 2.1e-13 80.9 99 48.5
MCO02G174 Micromonas commoda HOM05D003782 ORTHO05D004361 7.5e-11 72.4 309 27.2
CSS0040150 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 9.5e-06 55.5 49 65.3


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