Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 3.2e-67 258.5 145 100.0
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 2.1e-31 139.4 131 61.1
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 8.1e-31 137.5 140 57.1
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 4.0e-30 135.2 151 53.0
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 1.2e-29 133.7 144 53.5
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 1.5e-29 133.3 139 54.7
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 2.0e-29 132.9 141 51.1
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 3.4e-29 132.1 143 50.3
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 3.4e-29 132.1 135 52.6
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 4.5e-29 131.7 135 52.6
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 2.2e-28 129.4 135 54.8
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 2.2e-28 129.4 143 49.7
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 2.9e-28 129.0 129 58.9
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 2.9e-28 129.0 129 58.9
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 8.4e-28 127.5 133 50.4
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 1.1e-27 127.1 128 53.1
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 3.2e-27 125.6 133 51.1
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 4.2e-27 125.2 131 51.9
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 4.2e-27 125.2 135 49.6
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 4.2e-27 125.2 135 53.3
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 7.1e-27 124.4 142 50.7
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 7.1e-27 124.4 139 50.4
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 9.3e-27 124.0 142 50.7
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 9.3e-27 124.0 142 50.7
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 9.3e-27 124.0 146 49.3
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 1.6e-26 123.2 143 51.7
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 2.7e-26 122.5 143 49.7
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 2.7e-26 122.5 135 50.4
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 3.5e-26 122.1 142 47.2
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 4.6e-26 121.7 147 47.6
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 6.0e-26 121.3 138 49.3
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 6.0e-26 121.3 152 53.3
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 1.0e-25 120.6 131 55.0
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 1.3e-25 120.2 128 51.6
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 1.3e-25 120.2 147 47.6
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 2.3e-25 119.4 133 48.9
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 3.0e-25 119.0 147 46.9
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 3.0e-25 119.0 135 56.3
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 3.9e-25 118.6 128 53.9
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 3.9e-25 118.6 135 47.4
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 3.9e-25 118.6 145 48.3
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 5.1e-25 118.2 144 45.8
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 5.1e-25 118.2 133 46.6
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 6.7e-25 117.9 133 48.1
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 6.7e-25 117.9 148 49.3
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 8.7e-25 117.5 133 51.9
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 1.1e-24 117.1 133 48.1
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 1.5e-24 116.7 143 46.9
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 1.5e-24 116.7 133 45.9
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 1.5e-24 116.7 135 47.4
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 1.5e-24 116.7 148 50.0
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 1.9e-24 116.3 136 51.5
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 2.5e-24 115.9 134 50.7
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 4.3e-24 115.2 133 45.9
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 5.6e-24 114.8 137 48.2
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 5.6e-24 114.8 128 51.6
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 5.6e-24 114.8 128 51.6
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 1.3e-23 113.6 133 51.1
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 1.3e-23 113.6 131 51.1
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 1.3e-23 113.6 144 50.0
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 2.1e-23 112.8 143 44.8
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 2.1e-23 112.8 130 51.5
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 2.8e-23 112.5 138 48.6
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 1.8e-22 109.8 137 44.5
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 2.4e-22 109.4 145 43.4
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 5.3e-22 108.2 135 45.9
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 5.3e-22 108.2 139 46.8
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 6.9e-22 107.8 134 45.5
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 6.9e-22 107.8 137 47.4
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 1.5e-21 106.7 129 45.0
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.6e-21 105.9 133 45.9
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.6e-21 105.9 132 46.2
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 3.4e-21 105.5 136 44.1
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 3.4e-21 105.5 125 45.6
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 3.4e-21 105.5 146 43.8
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 3.4e-21 105.5 127 47.2
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 4.5e-21 105.1 138 47.8
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 1.3e-20 103.6 125 44.8
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 2.2e-20 102.8 143 43.4
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 3.8e-20 102.1 136 44.9
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 1.1e-19 100.5 127 43.3
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 1.9e-19 99.8 133 44.4
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 5.5e-19 98.2 136 44.1
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 5.5e-19 98.2 136 44.1
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 5.5e-19 98.2 136 44.1
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 5.5e-19 98.2 129 45.0
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 7.1e-19 97.8 136 43.4
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 7.1e-19 97.8 128 52.3
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 1.6e-18 96.7 137 43.1
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 1.6e-18 96.7 127 46.5
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 3.9e-17 92.0 130 45.4
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 1.1e-16 90.5 135 44.4
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 1.5e-16 90.1 139 39.6
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 2.5e-16 89.4 97 52.6
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 4.3e-16 88.6 133 39.1
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 3.7e-15 85.5 220 31.4
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 4.8e-15 85.1 115 44.3
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 6.3e-15 84.7 129 41.9
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 8.2e-15 84.3 70 58.6
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 3.4e-13 79.0 116 44.0
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 4.5e-13 78.6 69 56.5
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 1.7e-12 76.6 209 30.6
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 2.2e-12 76.3 145 40.7
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 6.5e-12 74.7 130 40.0
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.6e-10 70.1 139 38.1
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 2.1e-10 69.7 152 34.9
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 1.4e-09 67.0 70 47.1
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 2.8e-07 59.3 102 39.2
Actinidia18153 Actinidia chinensis HOM05D003443 ORTHO05D008640 3.1e-06 55.8 60 50.0
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 3.1e-06 55.8 87 39.1


User provided reference genes

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