Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 7.8e-52 206.8 103 100.0
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 3.3e-42 174.9 101 82.2
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 3.3e-42 174.9 101 82.2
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.2e-41 172.9 101 83.2
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 2.1e-41 172.2 101 83.2
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 3.6e-41 171.4 101 81.2
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.4e-40 169.5 101 80.2
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.8e-40 169.1 101 80.2
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 8.9e-40 166.8 104 82.7
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 8.9e-40 166.8 106 78.3
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 3.4e-39 164.9 101 80.2
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 3.4e-39 164.9 101 80.2
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 5.8e-39 164.1 105 81.0
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.3e-38 162.9 101 79.2
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.3e-38 162.9 105 81.9
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.9e-38 161.8 95 83.2
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 2.9e-38 161.8 101 76.2
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 6.4e-38 160.6 101 78.2
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 6.4e-38 160.6 103 81.6
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 6.4e-38 160.6 105 81.0
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 1.1e-37 159.8 102 80.4
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 1.1e-37 159.8 101 78.2
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.4e-37 159.5 105 78.1
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 1.9e-37 159.1 95 80.0
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.9e-37 159.1 97 79.4
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.9e-37 159.1 97 79.4
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 3.2e-37 158.3 106 77.4
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 4.1e-37 157.9 109 74.3
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 4.1e-37 157.9 102 80.4
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 4.1e-37 157.9 103 78.6
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 9.2e-37 156.8 105 78.1
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.2e-36 156.4 105 77.1
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.6e-36 156.0 104 79.8
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 2.1e-36 155.6 101 77.2
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 4.6e-36 154.5 95 81.1
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.6e-36 154.5 105 80.0
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 6.0e-36 154.1 104 75.0
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 6.0e-36 154.1 103 79.6
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 6.0e-36 154.1 111 76.6
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 5.1e-35 151.0 112 71.4
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 8.6e-35 150.2 101 72.3
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 1.1e-34 149.8 102 75.5
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 1.5e-34 149.4 96 79.2
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 5.6e-34 147.5 107 71.0
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 5.6e-34 147.5 96 77.1
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 7.3e-34 147.1 91 80.2
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 3.6e-33 144.8 103 73.8
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 3.6e-33 144.8 104 74.0
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 8.1e-33 143.7 101 73.3
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.1e-32 143.3 111 69.4
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.1e-32 143.3 111 69.4
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.1e-32 143.3 110 71.8
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.4e-32 142.9 105 72.4
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 1.4e-32 142.9 101 73.3
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 1.4e-32 142.9 101 73.3
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.3e-32 142.1 107 72.0
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 4.0e-32 141.4 98 73.5
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 6.8e-32 140.6 101 72.3
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 6.8e-32 140.6 102 73.5
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 6.8e-32 140.6 102 73.5
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 6.8e-32 140.6 94 76.6
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 1.2e-31 139.8 103 73.8
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 1.5e-31 139.4 101 72.3
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 2.6e-31 138.7 102 65.7
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 4.4e-31 137.9 107 69.2
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 1.7e-30 136.0 98 74.5
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 6.4e-30 134.0 96 72.9
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.1e-29 133.3 85 78.8
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.4e-29 132.9 100 71.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 3.2e-29 131.7 107 71.0
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 4.1e-29 131.3 103 67.0
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 9.2e-29 130.2 112 64.3
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.6e-28 129.4 104 64.4
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 1.6e-28 129.4 84 76.2
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.6e-28 129.4 89 76.4
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 2.1e-28 129.0 106 64.2
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 3.5e-28 128.3 108 67.6
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 4.6e-28 127.9 108 65.7
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 4.6e-28 127.9 104 70.2
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 6.0e-28 127.5 105 68.6
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.3e-27 126.3 111 63.1
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.3e-27 126.3 103 61.2
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 3.0e-27 125.2 86 75.6
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 6.6e-27 124.0 104 62.5
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 6.6e-27 124.0 114 63.2
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 8.6e-27 123.6 112 63.4
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 8.6e-27 123.6 112 63.4
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 8.6e-27 123.6 115 60.9
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 1.1e-26 123.2 113 62.8
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.1e-26 123.2 113 61.9
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.1e-26 123.2 108 65.7
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 1.5e-26 122.9 110 64.5
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 1.9e-26 122.5 108 66.7
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 9.5e-26 120.2 109 61.5
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 1.2e-25 119.8 110 61.8
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 3.6e-25 118.2 110 59.1
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 1.1e-24 116.7 63 88.9
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 2.4e-24 115.5 106 63.2
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 2.4e-24 115.5 106 63.2
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 6.8e-24 114.0 114 57.9
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 8.9e-24 113.6 111 59.5
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 8.9e-24 113.6 112 57.1
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 1.5e-23 112.8 113 55.8
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.8e-23 110.9 86 72.1
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.3e-22 109.8 89 67.4
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 1.3e-22 109.8 106 61.3
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 2.9e-22 108.6 112 54.5
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.2e-20 103.2 104 56.7
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.1e-20 102.4 108 56.5
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 5.6e-18 94.4 78 67.9
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.8e-17 92.0 69 75.4
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.8e-17 92.0 94 53.2
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 9.0e-16 87.0 81 64.2
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 2.0e-15 85.9 57 78.9
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 3.2e-13 78.6 50 80.0
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 1.2e-12 76.6 83 57.8
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.2e-12 76.6 105 47.6
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 3.0e-11 72.0 117 41.0
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 4.3e-10 68.2 103 45.6
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 9.6e-10 67.0 55 70.9
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 1.5e-07 59.7 103 41.7


User provided reference genes

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