Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00120 Aquilegia oxysepala HOM05D004678 ORTHO05D005880 2.2e-249 865.1 425 100.0
TAR381G1101 Trochodendron aralioides HOM05D004678 ORTHO05D005880 3.5e-207 724.9 421 84.1
QL02p033997 Quercus lobata HOM05D004678 ORTHO05D005880 2.6e-202 708.8 425 83.1
CiPaw.16G062100 Carya illinoinensis HOM05D004678 ORTHO05D005880 2.2e-201 705.7 422 82.2
QL04p000013 Quercus lobata HOM05D004678 ORTHO05D005880 8.3e-201 703.7 425 82.4
MD12G1021300 Malus domestica HOM05D004678 ORTHO05D005880 1.4e-200 703.0 424 82.3
Cfa018194 Carpinus fangiana HOM05D004678 ORTHO05D005880 4.1e-200 701.4 424 81.4
QL04p003199 Quercus lobata HOM05D004678 ORTHO05D005880 9.2e-200 700.3 440 80.2
CiPaw.15G082000 Carya illinoinensis HOM05D004678 ORTHO05D005880 2.1e-199 699.1 422 81.5
CSS0026818 Camellia sinensis var. sinensis HOM05D004678 ORTHO05D005880 6.0e-199 697.6 421 82.7
Prupe.6G194700 Prunus persica HOM05D004678 ORTHO05D005880 2.5e-197 692.2 422 80.6
Ciclev10001274m.g Citrus clementina HOM05D004678 ORTHO05D005880 2.1e-196 689.1 424 79.2
Hund27082 Selenicereus undatus HOM05D004678 ORTHO05D005880 2.1e-196 689.1 427 80.1
Hund16801 Selenicereus undatus HOM05D004678 ORTHO05D005880 4.0e-195 684.9 422 79.6
Phvul.004G083900 Phaseolus vulgaris HOM05D004678 ORTHO05D005880 6.8e-195 684.1 421 79.3
ClCG09G010470 Citrullus lanatus HOM05D004678 ORTHO05D005880 8.9e-195 683.7 421 79.6
VMungo0464G0500 Vigna mungo HOM05D004678 ORTHO05D005880 3.4e-194 681.8 421 79.3
Lalb_Chr01g0010011 Lupinus albus HOM05D004678 ORTHO05D005880 4.4e-194 681.4 423 79.4
LjContig00222g0007085 Lotus japonicus HOM05D004678 ORTHO05D005880 7.6e-194 680.6 421 79.3
CANSAT21G1357 Cannabis sativa HOM05D004678 ORTHO05D005880 9.9e-194 680.2 422 78.4
ClCG07G016110 Citrullus lanatus HOM05D004678 ORTHO05D005880 2.2e-193 679.1 425 79.1
Hma1.2p1_0285F.1_g113940 Hydrangea macrophylla HOM05D004678 ORTHO05D005880 3.8e-193 678.3 433 79.4
Eucgr.L00028 Eucalyptus grandis HOM05D004678 ORTHO05D005880 1.4e-192 676.4 417 79.1
Glyma.16G155800 Glycine max HOM05D004678 ORTHO05D005880 1.4e-192 676.4 424 79.5
Hma1.2p1_1487F.1_g286570 Hydrangea macrophylla HOM05D004678 ORTHO05D005880 1.9e-192 676.0 381 86.4
Ca_07561_v3 Cicer arietinum L. HOM05D004678 ORTHO05D005880 2.4e-192 675.6 420 79.3
FAN03G3192 Fragaria x ananassa HOM05D004678 ORTHO05D005880 2.4e-192 675.6 427 78.7
MELO3C023659.2 Cucumis melo HOM05D004678 ORTHO05D005880 3.2e-192 675.2 384 84.9
Actinidia04312 Actinidia chinensis HOM05D004678 ORTHO05D005880 4.1e-192 674.9 401 82.8
Eucgr.G01597 Eucalyptus grandis HOM05D004678 ORTHO05D005880 4.1e-192 674.9 417 79.1
FvH4_7g02740 Fragaria vesca HOM05D004678 ORTHO05D005880 5.4e-192 674.5 426 78.4
PGR142G3802 Punica granatum HOM05D004678 ORTHO05D005880 9.2e-192 673.7 390 82.8
FAN06G1846 Fragaria x ananassa HOM05D004678 ORTHO05D005880 1.2e-191 673.3 426 78.4
Lj3A851T66 Lonicera japonica HOM05D004678 ORTHO05D005880 1.2e-191 673.3 447 77.4
Sc23g0001180 Simmondsia chinensis HOM05D004678 ORTHO05D005880 1.2e-191 673.3 423 78.0
GSVIVG01034496001 Vitis vinifera HOM05D004678 ORTHO05D005880 3.5e-191 671.8 373 86.3
DCAR_026915 Daucus carota HOM05D004678 ORTHO05D005880 6.0e-191 671.0 421 79.3
Duzib177G0967 Durio zibethinus HOM05D004678 ORTHO05D005880 1.0e-190 670.2 426 76.1
FAN10G3317 Fragaria x ananassa HOM05D004678 ORTHO05D005880 1.0e-190 670.2 427 78.2
Manes.02G191200 Manihot esculenta HOM05D004678 ORTHO05D005880 1.3e-190 669.8 424 77.1
Thecc.08G181800 Theobroma cacao HOM05D004678 ORTHO05D005880 1.3e-190 669.8 429 76.2
CsaV3_7G024070 Cucumis sativus L. HOM05D004678 ORTHO05D005880 1.7e-190 669.5 426 78.4
AUR62023572 Chenopodium quinoa HOM05D004678 ORTHO05D005880 3.0e-190 668.7 435 77.2
Lsat_1_v5_gn_9_80761 Lactuca sativa HOM05D004678 ORTHO05D005880 3.9e-190 668.3 420 79.5
Gohir.D09G114300 Gossypium hirsutum HOM05D004678 ORTHO05D005880 6.6e-190 667.5 426 76.5
Medtr6g033540 Medicago truncatula HOM05D004678 ORTHO05D005880 8.7e-190 667.2 424 77.8
Gohir.A09G117500 Gossypium hirsutum HOM05D004678 ORTHO05D005880 1.1e-189 666.8 425 76.9
Potri.013G113900 Populus trichocarpa HOM05D004678 ORTHO05D005880 1.1e-189 666.8 423 76.8
Nitab4.5_0002113g0110 Nicotiana tabacum HOM05D004678 ORTHO05D005880 1.5e-189 666.4 432 75.9
RcHm_v2.0_Chr1g0322001 Rosa chinensis HOM05D004678 ORTHO05D005880 2.5e-189 665.6 426 77.5
ATR0152G001 Amborella trichopoda HOM05D004678 ORTHO05D005880 3.3e-189 665.2 374 85.0
PGSC0003DMG400032541 Solanum tuberosum HOM05D004678 ORTHO05D005880 4.3e-189 664.8 424 77.6
TWI34G1123 Tripterygium wilfordii HOM05D004678 ORTHO05D005880 4.3e-189 664.8 421 77.2
Solyc04g009350.3 Solanum lycopersicum HOM05D004678 ORTHO05D005880 5.6e-189 664.5 424 77.4
EL10Ac1g00076 Beta vulgaris HOM05D004678 ORTHO05D005880 7.3e-189 664.1 442 76.0
Sopen04g004470 Solanum pennellii HOM05D004678 ORTHO05D005880 9.6e-189 663.7 424 77.4
TPR.G36715 Trifolium pratense HOM05D004678 ORTHO05D005880 1.2e-188 663.3 421 77.9
Oeu044536.1 Olea europaea HOM05D004678 ORTHO05D005880 2.1e-188 662.5 435 78.2
Migut.L01374 Erythranthe guttata HOM05D004678 ORTHO05D005880 3.6e-188 661.8 430 77.0
PSO017G6114 Papaver somniferum HOM05D004678 ORTHO05D005880 8.1e-188 660.6 372 84.9
Peaxi162Scf00760g00021 Petunia axillaris HOM05D004678 ORTHO05D005880 2.4e-187 659.1 429 75.5
PSO063G1958 Papaver somniferum HOM05D004678 ORTHO05D005880 4.0e-187 658.3 372 84.7
Sabra13G0096400 Salix brachista HOM05D004678 ORTHO05D005880 5.2e-187 657.9 427 75.9
Nitab4.5_0007261g0010 Nicotiana tabacum HOM05D004678 ORTHO05D005880 1.2e-186 656.8 459 72.3
Cc02_g14680 Coffea canephora HOM05D004678 ORTHO05D005880 1.5e-186 656.4 397 81.6
COL.COLO4_19882 Corchorus olitorius HOM05D004678 ORTHO05D005880 1.5e-186 656.4 423 76.4
SalBow2G0558 Salvia bowleyana HOM05D004678 ORTHO05D005880 5.8e-186 654.4 365 86.3
SalBow2G2825 Salvia bowleyana HOM05D004678 ORTHO05D005880 5.8e-186 654.4 365 86.3
HanXRQChr06g0184941 Helianthus annuus HOM05D004678 ORTHO05D005880 9.9e-186 653.7 420 78.3
Atru.chr13.1797 Acer truncatum HOM05D004678 ORTHO05D005880 2.2e-185 652.5 380 83.4
ECA236G1055 Erigeron canadensis HOM05D004678 ORTHO05D005880 2.2e-185 652.5 428 77.1
TWI32G0349 Tripterygium wilfordii HOM05D004678 ORTHO05D005880 2.9e-185 652.1 378 80.4
MSTRG.13391 Avicennia marina HOM05D004678 ORTHO05D005880 3.8e-185 651.7 432 76.4
CDE04G3296 Ceratophyllum demersum HOM05D004678 ORTHO05D005880 3.8e-185 651.7 387 82.2
HanXRQChr14g0428861 Helianthus annuus HOM05D004678 ORTHO05D005880 4.9e-185 651.4 376 84.6
Zm00001eb252330 Zea mays HOM05D004678 ORTHO05D005880 4.9e-185 651.4 389 80.7
THA.LOC104800109 Tarenaya hassleriana HOM05D004678 ORTHO05D005880 3.5e-183 645.2 421 75.3
Sp5g26990 Schrenkiella parvula HOM05D004678 ORTHO05D005880 2.3e-182 642.5 421 75.8
Rhsim09G0073000 Rhododendron simsii HOM05D004678 ORTHO05D005880 3.9e-182 641.7 466 71.0
SGA_v2.0_scaffold8G04287 Striga asiatica HOM05D004678 ORTHO05D005880 5.1e-182 641.3 457 71.6
Cpa.g.sc36.40 Carica papaya HOM05D004678 ORTHO05D005880 1.9e-181 639.4 426 74.9
CAN.G624.22 Capsicum annuum HOM05D004678 ORTHO05D005880 3.3e-181 638.6 397 80.1
AT5G10330 Arabidopsis thaliana HOM05D004678 ORTHO05D005880 9.6e-181 637.1 382 80.4
Os02g0709200 Oryza sativa ssp. japonica HOM05D004678 ORTHO05D005880 1.3e-180 636.7 360 84.7
Carub.0002s1870 Capsella rubella HOM05D004678 ORTHO05D005880 2.8e-180 635.6 421 74.6
AL2G31530 Arabidopsis lyrata HOM05D004678 ORTHO05D005880 6.2e-180 634.4 382 80.4
BcaC08g46628 Brassica carinata HOM05D004678 ORTHO05D005880 1.1e-179 633.6 368 81.2
BcaC03g15310 Brassica carinata HOM05D004678 ORTHO05D005880 1.2e-178 630.2 364 83.5
Thhalv10007345m.g Eutrema salsugineum HOM05D004678 ORTHO05D005880 1.2e-178 630.2 421 73.6
BcaB03g14912 Brassica carinata HOM05D004678 ORTHO05D005880 1.5e-178 629.8 358 83.8
unitig_699.g19496 Utricularia gibba HOM05D004678 ORTHO05D005880 2.6e-178 629.0 430 72.8
BcaB05g24693 Brassica carinata HOM05D004678 ORTHO05D005880 4.5e-178 628.2 408 76.2
CARHR064740 Cardamine hirsuta HOM05D004678 ORTHO05D005880 5.8e-178 627.9 383 79.4
AT1G71920 Arabidopsis thaliana HOM05D004678 ORTHO05D005880 9.9e-178 627.1 382 79.6
arahy.Tifrunner.gnm1.ann1.7PLX29 Arachis hypogaea HOM05D004678 ORTHO05D005880 3.8e-177 625.2 426 74.4
Aa31LG4G8700 Aethionema arabicum HOM05D004678 ORTHO05D005880 8.4e-177 624.0 421 73.9
Ah.05g178040 Amaranthus hybridus HOM05D004678 ORTHO05D005880 1.9e-176 622.9 467 69.6
BcaC08g46629 Brassica carinata HOM05D004678 ORTHO05D005880 4.2e-176 621.7 358 82.7
C06p45990 Brassica napus HOM05D004678 ORTHO05D005880 4.2e-176 621.7 367 80.4
BolC6t39653H Brassica oleracea HOM05D004678 ORTHO05D005880 4.2e-176 621.7 367 80.4
BraA02t06800Z Brassica rapa HOM05D004678 ORTHO05D005880 5.4e-176 621.3 364 82.7
BraA07t31374Z Brassica rapa HOM05D004678 ORTHO05D005880 5.4e-176 621.3 378 78.6
A02p17560 Brassica napus HOM05D004678 ORTHO05D005880 7.1e-176 620.9 358 83.2
C02p29210 Brassica napus HOM05D004678 ORTHO05D005880 7.1e-176 620.9 377 80.6
BolC2t08971H Brassica oleracea HOM05D004678 ORTHO05D005880 7.1e-176 620.9 377 80.6
arahy.Tifrunner.gnm1.ann1.57RIKC Arachis hypogaea HOM05D004678 ORTHO05D005880 1.3e-174 616.7 427 73.5
A07p38090 Brassica napus HOM05D004678 ORTHO05D005880 1.8e-174 616.3 426 71.4
Dinv30099 Davidia involucrata HOM05D004678 ORTHO05D005880 6.2e-172 607.8 339 88.5
AUR62004653 Chenopodium quinoa HOM05D004678 ORTHO05D005880 1.4e-171 606.7 427 72.4
Gorai.006G132200 Gossypium raimondii HOM05D004678 ORTHO05D005880 4.5e-170 601.7 386 76.9
BcaB05g24692 Brassica carinata HOM05D004678 ORTHO05D005880 1.8e-163 579.7 408 71.8
HPP92_016059 Vanilla planifolia HOM05D004678 ORTHO05D005880 4.0e-163 578.6 347 79.5
Nn6g34909 Nelumbo nucifera HOM05D004678 ORTHO05D005880 1.1e-152 543.9 421 66.0
SMO343G0150 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 3.2e-152 542.3 360 70.6
Mapoly0007s0122 Marchantia polymorpha HOM05D004678 ORTHO05D005880 5.5e-152 541.6 363 71.1
Pp3c19_9420 Physcomitrium patens HOM05D004678 ORTHO05D005880 2.1e-151 539.7 357 71.1
Haze_17921 Corylus avellana HOM05D004678 ORTHO05D005880 3.9e-150 535.4 490 59.4
MD14G1018500 Malus domestica HOM05D004678 ORTHO05D005880 5.9e-146 521.5 425 65.4
Sed0015109 Sechium edule HOM05D004678 ORTHO05D005880 1.4e-144 516.9 295 83.7
Cre16.g672385 Chlamydomonas reinhardtii HOM05D004678 ORTHO05D005880 1.1e-141 507.3 356 68.0
Sopen11g017200 Solanum pennellii HOM05D004678 ORTHO05D005880 8.5e-137 491.1 309 78.3
PRCOL_00004069 Prasinoderma coloniale HOM05D004678 ORTHO05D005880 1.4e-131 473.8 346 64.2
MCO01G265 Micromonas commoda HOM05D004678 ORTHO05D005880 6.3e-124 448.4 388 56.7
Medtr6g033600 Medicago truncatula HOM05D004678 ORTHO05D005880 4.1e-123 445.7 255 85.1
Psat1g098720 Pisum sativum HOM05D004678 ORTHO05D005880 5.3e-123 445.3 312 71.2
TAR629G2521 Trochodendron aralioides HOM05D004678 ORTHO05D005880 5.9e-122 441.8 307 73.3
Ca_29915_v3 Cicer arietinum L. HOM05D004678 ORTHO05D005880 4.1e-115 419.1 252 80.6
HPP92_016095 Vanilla planifolia HOM05D004678 ORTHO05D005880 2.8e-108 396.4 386 55.4
AagrBONN_evm.TU.Sc2ySwM_362.1592 Anthoceros agrestis HOM05D004678 ORTHO05D005880 1.2e-103 380.9 259 69.5
CDE07G1916 Ceratophyllum demersum HOM05D004678 ORTHO05D005880 1.6e-103 380.6 258 74.0
Nitab4.5_0003152g0020 Nicotiana tabacum HOM05D004678 ORTHO05D005880 3.4e-93 346.3 422 48.3
Cfa005301 Carpinus fangiana HOM05D004678 ORTHO05D005880 8.3e-84 315.1 178 84.3
Cfa009297 Carpinus fangiana HOM05D004678 ORTHO05D005880 3.0e-81 306.6 179 82.7
GSVIVG01025260001 Vitis vinifera HOM05D004678 ORTHO05D005880 2.5e-80 303.5 170 87.6
Prupe.8G056800 Prunus persica HOM05D004678 ORTHO05D005880 1.0e-73 281.6 187 75.9
MBI17_g38771_MAGBIO Magnolia biondii HOM05D004678 ORTHO05D005880 1.1e-72 278.1 203 70.0
MBI17_g42088_MAGBIO Magnolia biondii HOM05D004678 ORTHO05D005880 1.1e-72 278.1 203 70.0
DCAR_023441 Daucus carota HOM05D004678 ORTHO05D005880 1.2e-58 231.5 156 75.0
CBR_g40358 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-54 216.5 131 76.3
GSVIVG01025261001 Vitis vinifera HOM05D004678 ORTHO05D005880 1.5e-53 214.5 124 79.8
SMO367G0035 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 7.1e-51 205.7 128 75.0
Solyc11g040030.3 Solanum lycopersicum HOM05D004678 ORTHO05D005880 1.3e-44 184.9 176 56.2
SMO035G0001 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 7.7e-37 159.1 182 53.8
SHI09056 Sapria himalayana HOM05D004678 ORTHO05D005880 1.1e-35 155.2 86 82.6
Cfa024628 Carpinus fangiana HOM05D004678 ORTHO05D005880 2.5e-35 154.1 376 31.1
SHI09055 Sapria himalayana HOM05D004678 ORTHO05D005880 4.2e-35 153.3 94 76.6
PGSC0003DMG400008416 Solanum tuberosum HOM05D004678 ORTHO05D005880 2.5e-32 144.1 136 55.1
Psat0s2699g0120 Pisum sativum HOM05D004678 ORTHO05D005880 1.7e-31 141.4 77 85.7
SMO343G0161 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 4.5e-29 133.3 120 57.5
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.6e-26 124.8 113 58.4
CAN.G137.23 Capsicum annuum HOM05D004678 ORTHO05D000493 2.1e-26 124.4 168 44.6
CDE07G1051 Ceratophyllum demersum HOM05D004678 ORTHO05D043902 1.4e-25 121.7 79 74.7
Psat0s2699g0200 Pisum sativum HOM05D004678 ORTHO05D043902 2.8e-15 87.4 50 82.0
PRCOL_00006728 Prasinoderma coloniale HOM05D004678 ORTHO05D333305 1.3e-12 78.6 422 25.4
Pp3s32_480 Physcomitrium patens HOM05D003605 ORTHO05D309393 3.8e-12 77.0 186 29.6
CBR_g81019 Chara braunii HOM05D003605 ORTHO05D004292 6.5e-12 76.3 258 27.5
FAN26G2714 Fragaria x ananassa HOM05D003605 ORTHO05D004292 6.5e-12 76.3 312 26.6
FvH4_1g21500 Fragaria vesca HOM05D003605 ORTHO05D004292 8.5e-12 75.9 323 27.2
FAN19G1223 Fragaria x ananassa HOM05D003605 ORTHO05D004292 8.5e-12 75.9 323 27.2
COL.COLO4_19765 Corchorus olitorius HOM05D004678 ORTHO05D005880 1.6e-10 71.6 35 82.9
RcHm_v2.0_Chr2g0115381 Rosa chinensis HOM05D003605 ORTHO05D004292 2.1e-10 71.2 285 27.0
CBR_g36553 Chara braunii HOM05D003605 ORTHO05D003078 3.0e-09 67.4 163 29.4
Lsat_1_v5_gn_7_11140 Lactuca sativa HOM05D002771 ORTHO05D003078 1.2e-08 65.5 255 25.9
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 2.6e-08 64.3 246 24.4
Cpa.g.sc36.33 Carica papaya HOM05D002771 ORTHO05D003078 3.4e-08 63.9 251 22.3
CsaV3_7G029770 Cucumis sativus L. HOM05D002771 ORTHO05D003078 3.4e-08 63.9 231 23.4
Pp3c20_8270 Physcomitrium patens HOM05D004697 ORTHO05D006015 3.4e-08 63.9 297 23.2
Nitab4.5_0001520g0040 Nicotiana tabacum HOM05D004678 ORTHO05D012214 2.2e-07 61.2 58 55.2
Lj1A20T48 Lonicera japonica HOM05D002771 ORTHO05D003078 2.8e-07 60.8 237 24.1
FAN23G2759 Fragaria x ananassa HOM05D003605 ORTHO05D004292 6.3e-07 59.7 193 29.5
Lsat_1_v5_gn_4_104321 Lactuca sativa HOM05D004697 ORTHO05D006015 6.3e-07 59.7 207 24.2
Mapoly0162s0009 Marchantia polymorpha HOM05D002771 ORTHO05D003078 8.3e-07 59.3 231 22.1
Zm00001eb336900 Zea mays HOM05D004697 ORTHO05D006015 1.4e-06 58.5 235 25.1
SHI09057 Sapria himalayana HOM05D004678 ORTHO05D005880 1.8e-06 58.2 54 48.1
CAN.G933.13 Capsicum annuum HOM05D002015 ORTHO05D017741 7.0e-06 56.2 57 49.1


User provided reference genes

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