Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00101 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 0.0e+00 2024.6 1008 100.0
Aqoxy2G02197 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 0.0e+00 1991.5 1008 98.1
Aqoxy6G01398 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 0.0e+00 1986.8 1008 97.9
TAR625G0099 Trochodendron aralioides HOM05D004101 ORTHO05D005221 0.0e+00 1261.9 995 66.4
TAR383G0434 Trochodendron aralioides HOM05D004101 ORTHO05D005221 0.0e+00 1257.7 1004 65.6
Nn5g27278 Nelumbo nucifera HOM05D004101 ORTHO05D005221 0.0e+00 1248.0 1012 64.5
Dinv05108 Davidia involucrata HOM05D004101 ORTHO05D005221 0.0e+00 1215.3 1005 62.5
Thecc.08G177600 Theobroma cacao HOM05D004101 ORTHO05D005221 0.0e+00 1209.5 1009 63.3
Cfa008084 Carpinus fangiana HOM05D004101 ORTHO05D005221 0.0e+00 1203.0 995 63.6
Dinv36168 Davidia involucrata HOM05D004101 ORTHO05D005221 0.0e+00 1203.0 1007 62.4
GSVIVG01036377001 Vitis vinifera HOM05D004101 ORTHO05D005221 0.0e+00 1201.0 1003 62.3
QL09p002038 Quercus lobata HOM05D004101 ORTHO05D005221 0.0e+00 1192.9 992 61.7
CiPaw.03G015400 Carya illinoinensis HOM05D004101 ORTHO05D005221 0.0e+00 1190.6 1000 62.3
Duzib177G1024 Durio zibethinus HOM05D004101 ORTHO05D005221 0.0e+00 1187.2 1056 60.0
CSS0023016 Camellia sinensis var. sinensis HOM05D004101 ORTHO05D005221 0.0e+00 1179.1 1004 61.6
Gohir.A02G087700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 0.0e+00 1177.9 1011 62.2
Ciclev10018750m.g Citrus clementina HOM05D004101 ORTHO05D005221 0.0e+00 1175.6 995 61.7
Gorai.005G116600 Gossypium raimondii HOM05D004101 ORTHO05D005221 0.0e+00 1174.5 1012 62.1
Manes.18G117901 Manihot esculenta HOM05D004101 ORTHO05D005221 0.0e+00 1174.1 1012 62.0
Actinidia29382 Actinidia chinensis HOM05D004101 ORTHO05D005221 0.0e+00 1173.3 1000 62.2
Gorai.009G267200 Gossypium raimondii HOM05D004101 ORTHO05D005221 0.0e+00 1172.9 1013 61.3
Atru.chr13.2487 Acer truncatum HOM05D004101 ORTHO05D005221 0.0e+00 1170.2 995 61.1
Gohir.A05G253700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 0.0e+00 1169.8 1013 61.3
Potri.019G072300 Populus trichocarpa HOM05D004101 ORTHO05D005221 0.0e+00 1165.6 1009 61.4
Manes.02G221381 Manihot esculenta HOM05D004101 ORTHO05D005221 0.0e+00 1161.7 1017 60.8
RcHm_v2.0_Chr6g0306901 Rosa chinensis HOM05D004101 ORTHO05D005221 0.0e+00 1161.0 996 61.4
CSS0032109 Camellia sinensis var. sinensis HOM05D004101 ORTHO05D005221 0.0e+00 1158.3 1006 61.4
PGR042G3616 Punica granatum HOM05D004101 ORTHO05D005221 0.0e+00 1157.9 1020 60.7
Potri.013G099700 Populus trichocarpa HOM05D004101 ORTHO05D005221 0.0e+00 1147.5 1011 60.7
PSO017G3151 Papaver somniferum HOM05D004101 ORTHO05D005221 0.0e+00 1146.7 1027 59.2
Phvul.011G002700 Phaseolus vulgaris HOM05D004101 ORTHO05D005221 0.0e+00 1146.7 1001 61.0
ATR1089G044 Amborella trichopoda HOM05D004101 ORTHO05D005221 0.0e+00 1146.3 1006 59.4
Glyma.09G234500 Glycine max HOM05D004101 ORTHO05D005221 0.0e+00 1145.6 1004 60.9
TWI18G0503 Tripterygium wilfordii HOM05D004101 ORTHO05D005221 0.0e+00 1145.6 1007 60.6
VMungo1127G2207 Vigna mungo HOM05D004101 ORTHO05D005221 0.0e+00 1142.5 1012 60.6
Solyc01g008320.3 Solanum lycopersicum HOM05D004101 ORTHO05D005221 0.0e+00 1140.6 1002 60.2
Prupe.1G442600 Prunus persica HOM05D004101 ORTHO05D005221 0.0e+00 1138.6 1006 60.5
CANSAT78G1092 Cannabis sativa HOM05D004101 ORTHO05D005221 0.0e+00 1138.3 1014 61.0
Ca_19680_v3 Cicer arietinum L. HOM05D004101 ORTHO05D005221 0.0e+00 1138.3 985 61.0
arahy.Tifrunner.gnm1.ann1.BP0NKM Arachis hypogaea HOM05D004101 ORTHO05D005221 0.0e+00 1137.1 1007 58.9
TWI12G0255 Tripterygium wilfordii HOM05D004101 ORTHO05D005221 0.0e+00 1131.3 1008 59.9
MD15G1088500 Malus domestica HOM05D004101 ORTHO05D005221 0.0e+00 1130.9 996 60.7
Sopen01g003840 Solanum pennellii HOM05D004101 ORTHO05D005221 0.0e+00 1130.9 1001 59.3
Lj3g0009901 Lotus japonicus HOM05D004101 ORTHO05D005221 0.0e+00 1130.2 987 60.1
Lalb_Chr16g0391261 Lupinus albus HOM05D004101 ORTHO05D005221 0.0e+00 1128.2 990 60.2
BcaB07g32808 Brassica carinata HOM05D004101 ORTHO05D005221 0.0e+00 1126.3 1017 58.6
Sp1g27280 Schrenkiella parvula HOM05D004101 ORTHO05D005221 0.0e+00 1125.2 1017 58.7
CsaV3_2G033160 Cucumis sativus L. HOM05D004101 ORTHO05D005221 0.0e+00 1124.0 1008 58.9
CARHR287040 Cardamine hirsuta HOM05D004101 ORTHO05D005221 0.0e+00 1123.6 1016 59.6
Thhalv10006721m.g Eutrema salsugineum HOM05D004101 ORTHO05D005221 0.0e+00 1123.6 1015 59.3
Medtr4g033490 Medicago truncatula HOM05D004101 ORTHO05D005221 0.0e+00 1123.2 982 59.9
Oeu028926.1 Olea europaea HOM05D004101 ORTHO05D005221 0.0e+00 1121.7 997 59.9
Psat7g146680 Pisum sativum HOM05D004101 ORTHO05D005221 0.0e+00 1121.3 986 60.5
PSO170G4509 Papaver somniferum HOM05D004101 ORTHO05D005221 0.0e+00 1120.5 987 61.0
PSO017G5679 Papaver somniferum HOM05D004101 ORTHO05D005221 0.0e+00 1119.8 986 60.4
Aa31LG2G14460 Aethionema arabicum HOM05D004101 ORTHO05D005221 0.0e+00 1116.7 996 59.6
Carub.0001s2990 Capsella rubella HOM05D004101 ORTHO05D005221 0.0e+00 1116.3 1012 58.9
PSO170G4791 Papaver somniferum HOM05D004101 ORTHO05D005221 0.0e+00 1116.3 995 58.9
BraA09t39007Z Brassica rapa HOM05D004101 ORTHO05D005221 0.0e+00 1112.8 1018 58.2
EL10Ac1g01668 Beta vulgaris HOM05D004101 ORTHO05D005221 0.0e+00 1112.1 1021 59.6
CANSAT21G1017 Cannabis sativa HOM05D004101 ORTHO05D005221 0.0e+00 1112.1 950 60.8
FvH4_2g35070 Fragaria vesca HOM05D004101 ORTHO05D005221 0.0e+00 1111.7 989 59.6
AT1G31480 Arabidopsis thaliana HOM05D004101 ORTHO05D005221 0.0e+00 1110.9 1013 58.1
ClCG11G008940 Citrullus lanatus HOM05D004101 ORTHO05D005221 0.0e+00 1109.7 1018 59.0
Sed0018643 Sechium edule HOM05D004101 ORTHO05D005221 0.0e+00 1109.4 988 59.8
C05p30730 Brassica napus HOM05D004101 ORTHO05D005221 0.0e+00 1107.8 1014 58.4
AL1G49570 Arabidopsis lyrata HOM05D004101 ORTHO05D005221 0.0e+00 1107.4 1015 57.8
BcaC05g27176 Brassica carinata HOM05D004101 ORTHO05D005221 0.0e+00 1105.1 1014 58.2
BolC5t31805H Brassica oleracea HOM05D004101 ORTHO05D005221 0.0e+00 1105.1 1014 58.2
BraA08t33053Z Brassica rapa HOM05D004101 ORTHO05D005221 0.0e+00 1104.7 1010 58.2
MSTRG.12725 Avicennia marina HOM05D004101 ORTHO05D005221 0.0e+00 1103.2 1005 58.3
A08p10530 Brassica napus HOM05D004101 ORTHO05D005221 0.0e+00 1101.3 1017 57.8
SalBow2G0849 Salvia bowleyana HOM05D004101 ORTHO05D005221 0.0e+00 1099.7 1001 59.5
arahy.Tifrunner.gnm1.ann1.FM3HJM Arachis hypogaea HOM05D004101 ORTHO05D005221 0.0e+00 1096.3 1096 54.0
Gohir.D02G102700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 0.0e+00 1094.3 945 62.2
MD08G1108000 Malus domestica HOM05D004101 ORTHO05D005221 0.0e+00 1090.5 1003 58.2
Aa31LG9G15840 Aethionema arabicum HOM05D004101 ORTHO05D005221 0.0e+00 1082.4 1008 57.5
Eucgr.F02954 Eucalyptus grandis HOM05D004101 ORTHO05D005221 0.0e+00 1080.9 1003 58.5
Sabra13G0085500 Salix brachista HOM05D004101 ORTHO05D005221 0.0e+00 1080.9 1085 55.9
HanXRQChr03g0062111 Helianthus annuus HOM05D004101 ORTHO05D005221 0.0e+00 1080.5 986 57.9
SGA_v2.0_scaffold158G37476 Striga asiatica HOM05D004101 ORTHO05D005221 0.0e+00 1078.5 1024 57.5
BcaC07g37755 Brassica carinata HOM05D004101 ORTHO05D005221 0.0e+00 1077.0 1015 57.1
BolC8t48140H Brassica oleracea HOM05D004101 ORTHO05D005221 0.0e+00 1077.0 1015 57.1
FAN27G2707 Fragaria x ananassa HOM05D004101 ORTHO05D005221 0.0e+00 1077.0 1006 57.8
FAN20G0554 Fragaria x ananassa HOM05D004101 ORTHO05D005221 0.0e+00 1075.8 986 59.5
SGA_v2.0_scaffold120G33012 Striga asiatica HOM05D004101 ORTHO05D005221 1.4e-310 1069.7 1056 55.3
DCAR_019079 Daucus carota HOM05D004101 ORTHO05D005221 4.0e-310 1068.1 1063 54.9
Cc10_g08720 Coffea canephora HOM05D004101 ORTHO05D005221 5.2e-310 1067.8 1043 56.2
Migut.D00784 Erythranthe guttata HOM05D004101 ORTHO05D005221 5.2e-310 1067.8 1006 56.7
ECA240G3381 Erigeron canadensis HOM05D004101 ORTHO05D005221 6.8e-310 1067.4 1003 57.5
Haze_13953 Corylus avellana HOM05D004101 ORTHO05D005221 1.3e-308 1063.1 1092 54.5
CAN.G282.41 Capsicum annuum HOM05D004101 ORTHO05D005221 2.7e-306 1055.4 1031 55.0
ECA234G0584 Erigeron canadensis HOM05D004101 ORTHO05D005221 2.1e-303 1045.8 992 56.5
HPP92_008596 Vanilla planifolia HOM05D004101 ORTHO05D005221 2.3e-302 1042.3 1098 53.7
Os08g0110700 Oryza sativa ssp. japonica HOM05D004101 ORTHO05D005221 2.6e-301 1038.9 985 56.0
Sabra19G0083800 Salix brachista HOM05D004101 ORTHO05D005221 8.3e-300 1033.9 1128 52.3
Zm00001eb260480 Zea mays HOM05D004101 ORTHO05D005221 4.1e-299 1031.6 991 56.0
Peaxi162Scf00021g02415 Petunia axillaris HOM05D004101 ORTHO05D005221 7.8e-298 1027.3 994 56.3
Zm00001eb174090 Zea mays HOM05D004101 ORTHO05D005221 5.1e-297 1024.6 1009 55.2
Atru.chr13.2489 Acer truncatum HOM05D004101 ORTHO05D005221 3.3e-296 1021.9 1008 55.6
Lj9A698G58 Lonicera japonica HOM05D004101 ORTHO05D005221 5.6e-296 1021.1 1000 56.0
Nitab4.5_0000069g0130 Nicotiana tabacum HOM05D004101 ORTHO05D005221 5.6e-296 1021.1 923 58.5
Lsat_1_v5_gn_7_42860 Lactuca sativa HOM05D004101 ORTHO05D005221 1.3e-292 1010.0 998 54.4
Atru.chr13.2501 Acer truncatum HOM05D004101 ORTHO05D005221 1.0e-289 1000.3 873 59.9
FAN15G3699 Fragaria x ananassa HOM05D004101 ORTHO05D005221 8.7e-289 997.3 981 56.0
MELO3C008088.2 Cucumis melo HOM05D004101 ORTHO05D005221 3.6e-287 991.9 919 57.5
COL.COLO4_06914 Corchorus olitorius HOM05D004101 ORTHO05D005221 8.1e-287 990.7 913 59.3
Hund26650 Selenicereus undatus HOM05D004101 ORTHO05D005221 9.9e-285 983.8 1217 48.2
AUR62022357 Chenopodium quinoa HOM05D004101 ORTHO05D005221 1.9e-283 979.5 1023 53.7
AUR62034351 Chenopodium quinoa HOM05D004101 ORTHO05D005221 3.5e-282 975.3 1021 54.7
Sc26g0002190 Simmondsia chinensis HOM05D004101 ORTHO05D005221 7.4e-272 941.0 864 58.1
THA.LOC104812717 Tarenaya hassleriana HOM05D004101 ORTHO05D005221 3.0e-257 892.5 829 59.1
Mapoly0151s0040 Marchantia polymorpha HOM05D004101 ORTHO05D005221 8.2e-255 884.4 1001 48.8
Ah.07g205660 Amaranthus hybridus HOM05D004101 ORTHO05D005221 6.7e-249 864.8 998 50.7
BcaB04g18153 Brassica carinata HOM05D004101 ORTHO05D005221 2.2e-244 849.7 822 55.1
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 2.5e-243 846.3 981 49.3
AagrBONN_evm.TU.Sc2ySwM_228.4088 Anthoceros agrestis HOM05D004101 ORTHO05D005221 3.6e-242 842.4 921 49.8
Pp3c3_10170 Physcomitrium patens HOM05D004101 ORTHO05D005221 8.8e-241 837.8 1068 45.1
SMO200G0043 Selaginella moellendorffii HOM05D004101 ORTHO05D005221 8.8e-241 837.8 919 49.7
Gohir.D05G255640 Gossypium hirsutum HOM05D004101 ORTHO05D005221 2.6e-237 826.2 765 60.1
Nitab4.5_0009427g0010 Nicotiana tabacum HOM05D004101 ORTHO05D005221 2.7e-213 746.5 778 53.0
CDE02G0702 Ceratophyllum demersum HOM05D004101 ORTHO05D005221 4.7e-194 682.6 724 55.4
A09p34710 Brassica napus HOM05D004101 ORTHO05D005221 5.8e-192 675.6 689 55.7
TPR.G31924 Trifolium pratense HOM05D004101 ORTHO05D005221 1.3e-188 664.5 695 53.5
Migut.N00698 Erythranthe guttata HOM05D004101 ORTHO05D005221 1.9e-182 644.0 415 75.7
Rhsim08G0116000 Rhododendron simsii HOM05D004101 ORTHO05D005221 1.4e-169 601.3 824 45.9
vmacro14428 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 9.0e-161 572.0 358 77.9
vmacro17837 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 1.7e-159 567.8 413 70.0
Lj2A387T50 Lonicera japonica HOM05D004101 ORTHO05D005221 4.2e-158 563.1 403 70.7
HPP92_008553 Vanilla planifolia HOM05D004101 ORTHO05D005221 6.9e-129 466.1 300 74.3
Cpa.g.sc24.82 Carica papaya HOM05D004101 ORTHO05D005221 7.7e-128 462.6 530 52.1
HPP92_008552 Vanilla planifolia HOM05D004101 ORTHO05D005221 6.1e-125 453.0 605 47.1
Oeu006618.1 Olea europaea HOM05D004101 ORTHO05D005221 5.7e-123 446.4 285 75.8
vmacro17836 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 6.5e-119 433.0 774 38.4
Lsat_1_v5_gn_5_98501 Lactuca sativa HOM05D004101 ORTHO05D007752 1.2e-117 428.7 298 69.8
Gohir.D05G255660 Gossypium hirsutum HOM05D004101 ORTHO05D005221 9.1e-113 412.5 462 50.4
Lj2A387G43 Lonicera japonica HOM05D004101 ORTHO05D005221 1.1e-110 405.6 686 41.3
CBR_g19663 Chara braunii HOM05D004101 ORTHO05D005221 3.7e-106 390.6 316 60.1
Migut.N00699 Erythranthe guttata HOM05D004101 ORTHO05D005221 7.7e-104 382.9 330 57.0
Cpa.g.sc24.85 Carica papaya HOM05D004101 ORTHO05D005221 7.7e-96 356.3 225 77.8
Aqoxy2G00645 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 8.1e-61 240.0 161 76.4
BcaB04g18154 Brassica carinata HOM05D004101 ORTHO05D005221 1.2e-59 236.1 160 71.9
CDE02G4445 Ceratophyllum demersum HOM05D004101 ORTHO05D005221 8.4e-58 229.9 211 54.5
vmacro14430 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 2.6e-51 208.4 139 65.5
A09p34730 Brassica napus HOM05D004101 ORTHO05D005221 4.2e-49 201.1 143 68.5
QL93p1879_0034 Quercus lobata HOM05D004101 ORTHO05D005221 5.1e-39 167.5 134 59.0
PSO017G1167 Papaver somniferum HOM05D004101 ORTHO05D005221 4.5e-35 154.5 115 66.1
SEGI_28351 Sequoiadendron giganteum HOM05D004101 ORTHO05D005221 3.8e-34 151.4 110 65.5
SEGI_18218 Sequoiadendron giganteum HOM05D004101 ORTHO05D005221 1.9e-30 139.0 76 86.8
SEGI_38945 Sequoiadendron giganteum HOM05D004101 ORTHO05D005221 1.2e-27 129.8 86 67.4
vmacro14429 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 3.0e-23 115.2 337 34.1
BolC1t03898H Brassica oleracea HOM05D010251 ORTHO05D005221 1.1e-17 96.7 163 36.8
Cpa.g.sc24.79 Carica papaya HOM05D004101 ORTHO05D005221 6.1e-16 90.9 66 63.6
SMO200G0098 Selaginella moellendorffii HOM05D004101 ORTHO05D037556 1.4e-15 89.7 82 57.3
COL.COLO4_06915 Corchorus olitorius HOM05D004101 ORTHO05D005221 2.3e-15 89.0 61 73.8
Medtr5g080490 Medicago truncatula HOM05D004101 ORTHO05D005221 7.4e-14 84.0 60 65.0
SHI03798 Sapria himalayana HOM05D004101 ORTHO05D005221 9.7e-14 83.6 90 52.2
CDE08G1083 Ceratophyllum demersum HOM05D004101 ORTHO05D005221 1.8e-12 79.3 69 52.2
SMO200G0135 Selaginella moellendorffii HOM05D004101 ORTHO05D037556 1.3e-10 73.2 62 58.1
Pp3c3_10160 Physcomitrium patens HOM05D004101 ORTHO05D005221 1.7e-10 72.8 63 49.2
SMO209G0008 Selaginella moellendorffii HOM05D004101 ORTHO05D037556 1.2e-08 66.6 52 63.5
Os07g0406600 Oryza sativa ssp. japonica HOM05D004101 ORTHO05D005221 2.7e-08 65.5 52 57.7
VMungo0251G0072 Vigna mungo HOM05D004101 ORTHO05D005221 3.6e-08 65.1 35 74.3
Lsat_1_v5_gn_5_153621 Lactuca sativa HOM05D004101 ORTHO05D005221 4.7e-08 64.7 68 48.5
BolC2t10203H Brassica oleracea HOM05D004101 ORTHO05D027158 3.0e-07 62.0 53 54.7
BolC2t10210H Brassica oleracea HOM05D004101 ORTHO05D027158 3.0e-07 62.0 53 54.7
BcaC05g27051 Brassica carinata HOM05D004101 ORTHO05D027158 1.1e-06 60.1 151 31.8
A01p24750 Brassica napus HOM05D004101 ORTHO05D027158 2.0e-06 59.3 53 52.8


User provided reference genes

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