Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00092 Aquilegia oxysepala HOM05D003975 ORTHO05D009762 8.8e-264 914.1 924 100.0
TAR375G0346 Trochodendron aralioides HOM05D003975 ORTHO05D009762 2.0e-34 152.1 187 47.1
Dinv28563 Davidia involucrata HOM05D003975 ORTHO05D009762 1.7e-33 149.1 852 54.0
Cfa008191 Carpinus fangiana HOM05D003975 ORTHO05D009762 1.2e-31 142.9 185 42.7
Haze_13863 Corylus avellana HOM05D003975 ORTHO05D009762 1.6e-31 142.5 185 42.7
QL09p019427 Quercus lobata HOM05D003975 ORTHO05D009762 1.6e-31 142.5 514 33.5
CANSAT11G0896 Cannabis sativa HOM05D003975 ORTHO05D009762 1.4e-30 139.4 175 44.0
CAN.G48.19 Capsicum annuum HOM05D003975 ORTHO05D009762 1.4e-30 139.4 185 40.5
Nitab4.5_0002149g0030 Nicotiana tabacum HOM05D003975 ORTHO05D009762 2.3e-30 138.7 377 29.2
TWI39G0436 Tripterygium wilfordii HOM05D003975 ORTHO05D009762 1.5e-29 136.0 182 40.1
Rhsim09G0192100 Rhododendron simsii HOM05D000201 ORTHO05D000375 2.0e-29 135.6 203 41.4
Atru.chr1.696 Acer truncatum HOM05D003975 ORTHO05D009762 3.4e-29 134.8 500 40.0
Nitab4.5_0002816g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 3.4e-29 134.8 185 42.2
MELO3C006816.2 Cucumis melo HOM05D003975 ORTHO05D009762 3.7e-28 131.3 191 40.8
Nitab4.5_0009543g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 1.4e-27 129.4 184 41.8
Sed0001623 Sechium edule HOM05D003975 ORTHO05D009762 5.4e-27 127.5 183 38.3
Cc00_g07030 Coffea canephora HOM05D003975 ORTHO05D009762 7.0e-27 127.1 194 36.1
Gorai.003G114200 Gossypium raimondii HOM05D003975 ORTHO05D009762 7.0e-27 127.1 181 40.9
Lj8C41T2 Lonicera japonica HOM05D003975 ORTHO05D009762 2.0e-26 125.6 196 39.8
MSTRG.8816 Avicennia marina HOM05D003975 ORTHO05D009762 2.7e-26 125.2 177 38.4
Duzib205G1466 Durio zibethinus HOM05D003975 ORTHO05D009762 2.7e-26 125.2 179 39.7
Gohir.D03G107900 Gossypium hirsutum HOM05D003975 ORTHO05D009762 5.9e-26 124.0 181 40.3
QL05p001270 Quercus lobata HOM05D003975 ORTHO05D009762 5.9e-26 124.0 192 39.6
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 1.3e-25 122.9 196 39.3
Thecc.03G157100 Theobroma cacao HOM05D003975 ORTHO05D009762 1.7e-25 122.5 180 41.1
Ciclev10004237m.g Citrus clementina HOM05D003975 ORTHO05D009762 5.0e-25 120.9 518 26.8
DCAR_029158 Daucus carota HOM05D003975 ORTHO05D009762 1.5e-24 119.4 186 38.7
SGA_v2.0_scaffold2G01188 Striga asiatica HOM05D003975 ORTHO05D009762 3.6e-23 114.8 165 39.4
MBI04_g11438_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009762 6.1e-23 114.0 168 38.1
Manes.15G055100 Manihot esculenta HOM05D003975 ORTHO05D009762 1.0e-22 113.2 179 35.2
Migut.F00464 Erythranthe guttata HOM05D003975 ORTHO05D009762 2.3e-22 112.1 191 35.6
PGR142G2422 Punica granatum HOM05D003975 ORTHO05D009762 3.0e-22 111.7 149 43.0
AT5G62370 Arabidopsis thaliana HOM05D003975 ORTHO05D009762 4.0e-22 111.3 185 35.1
CiPaw.03G094900 Carya illinoinensis HOM05D003975 ORTHO05D009762 5.2e-22 110.9 151 38.4
Potri.004G200900 Populus trichocarpa HOM05D003975 ORTHO05D009762 8.9e-22 110.2 516 23.4
COL.COLO4_14135 Corchorus olitorius HOM05D003975 ORTHO05D009762 1.5e-21 109.4 173 38.7
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 4.4e-21 107.8 147 40.8
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 5.7e-21 107.5 512 24.4
AL8G39200 Arabidopsis lyrata HOM05D003975 ORTHO05D009762 7.5e-21 107.1 185 34.1
Solyc03g093150.3 Solanum lycopersicum HOM05D003975 ORTHO05D009762 1.3e-20 106.3 151 41.1
Sopen03g023950 Solanum pennellii HOM05D003975 ORTHO05D009762 1.3e-20 106.3 151 41.1
PGSC0003DMG402014825 Solanum tuberosum HOM05D003975 ORTHO05D009762 1.7e-20 105.9 150 41.3
Sp2g25540 Schrenkiella parvula HOM05D003975 ORTHO05D009762 2.9e-20 105.1 185 33.5
Lsat_1_v5_gn_8_8880 Lactuca sativa HOM05D003975 ORTHO05D009762 3.7e-20 104.8 180 34.4
BolC1t02243H Brassica oleracea HOM05D003975 ORTHO05D009762 3.2e-19 101.7 185 33.5
Sabra15G0053100 Salix brachista HOM05D003975 ORTHO05D009762 9.2e-19 100.1 508 24.6
Sabra15G0054000 Salix brachista HOM05D003975 ORTHO05D009762 9.2e-19 100.1 508 22.0
Carub.0008s2305 Capsella rubella HOM05D003975 ORTHO05D009762 1.2e-18 99.8 186 33.3
Thhalv10003595m.g Eutrema salsugineum HOM05D003975 ORTHO05D009762 1.6e-18 99.4 516 22.1
Peaxi162Scf00241g00015 Petunia axillaris HOM05D003975 ORTHO05D009762 7.8e-18 97.1 109 47.7
CARHR276150 Cardamine hirsuta HOM05D003975 ORTHO05D009762 1.0e-17 96.7 185 33.0
ATR0743G137 Amborella trichopoda HOM05D003975 ORTHO05D009762 3.9e-17 94.7 164 34.1
Nn1g01091 Nelumbo nucifera HOM05D003975 ORTHO05D009762 6.6e-17 94.0 165 36.4
Eucgr.D00222 Eucalyptus grandis HOM05D003975 ORTHO05D009762 1.1e-16 93.2 165 33.9
ATR0743G010 Amborella trichopoda HOM05D003975 ORTHO05D009762 1.9e-16 92.4 164 32.3
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 3.3e-16 91.7 542 21.8
A01p18130 Brassica napus HOM05D003975 ORTHO05D009762 4.3e-16 91.3 185 31.9
BraA01t01768Z Brassica rapa HOM05D003975 ORTHO05D009762 4.3e-16 91.3 185 31.9
Sabra15G0045800 Salix brachista HOM05D003975 ORTHO05D009762 4.3e-16 91.3 508 24.0
HanXRQChr05g0142511 Helianthus annuus HOM05D003975 ORTHO05D009762 2.8e-15 88.6 185 31.4
THA.LOC104821407 Tarenaya hassleriana HOM05D003975 ORTHO05D009762 3.6e-15 88.2 182 33.5
CSS0048267 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 1.4e-14 86.3 117 39.3
Sabra15G0044600 Salix brachista HOM05D003975 ORTHO05D009762 4.0e-14 84.7 178 31.5
Sabra15G0048500 Salix brachista HOM05D003975 ORTHO05D009762 4.0e-14 84.7 178 31.5
Sabra15G0052100 Salix brachista HOM05D003975 ORTHO05D009762 4.0e-14 84.7 508 23.2
Sabra15G0060200 Salix brachista HOM05D003975 ORTHO05D009762 4.0e-14 84.7 178 31.5
Sabra15G0046400 Salix brachista HOM05D003975 ORTHO05D009762 5.2e-14 84.3 178 31.5
Sabra15G0031500 Salix brachista HOM05D003975 ORTHO05D009762 6.8e-14 84.0 508 23.6
Atru.chr1.699 Acer truncatum HOM05D003975 ORTHO05D009762 2.0e-13 82.4 160 33.1
ECA233G1567 Erigeron canadensis HOM05D003975 ORTHO05D009762 3.4e-13 81.6 116 36.2
C01p23090 Brassica napus HOM05D003975 ORTHO05D009762 5.8e-13 80.9 148 35.1
Aa31LG11G1250 Aethionema arabicum HOM05D003975 ORTHO05D009762 9.8e-13 80.1 147 34.7
GSVIVG01018516001 Vitis vinifera HOM05D003975 ORTHO05D009762 1.4e-11 76.3 136 35.3
CSS0004960 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 1.2e-10 73.2 139 33.1
Gohir.A03G058201 Gossypium hirsutum HOM05D003975 ORTHO05D009762 1.7e-09 69.3 94 34.0
Nitab4.5_0002556g0070 Nicotiana tabacum HOM05D003975 ORTHO05D009762 1.7e-09 69.3 139 32.4
HPP92_003270 Vanilla planifolia HOM05D003975 ORTHO05D009762 1.9e-08 65.9 179 29.6
BcaNung03569 Brassica carinata HOM05D003975 ORTHO05D009762 6.8e-06 57.4 151 29.1


User provided reference genes

Program Settings