Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 1.5e-159 566.2 303 100.0
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 2.7e-84 316.2 299 62.5
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 6.8e-80 301.6 202 74.8
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.2e-79 300.8 303 62.0
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 7.5e-79 298.1 203 70.9
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 2.2e-78 296.6 206 71.8
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 3.7e-78 295.8 206 71.8
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 1.2e-76 290.8 203 71.9
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.3e-75 287.3 212 66.5
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 3.9e-75 285.8 203 70.4
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 4.3e-74 282.3 203 69.0
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 4.3e-74 282.3 226 65.9
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.2e-71 274.2 199 68.3
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 2.0e-71 273.5 203 66.5
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 7.5e-71 271.6 210 66.2
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 9.9e-71 271.2 208 65.9
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.3e-70 270.8 203 63.1
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 4.9e-70 268.9 217 62.2
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.1e-69 267.7 202 65.3
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.4e-69 267.3 268 52.2
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 4.1e-69 265.8 196 66.8
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 5.4e-69 265.4 197 65.0
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 7.1e-69 265.0 214 58.4
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 1.2e-68 264.2 202 64.4
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 1.6e-68 263.8 201 63.7
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 2.1e-68 263.5 203 64.5
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 2.1e-68 263.5 198 65.7
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.5e-68 262.7 200 65.0
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 3.5e-68 262.7 195 65.1
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 4.6e-68 262.3 196 63.3
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 4.6e-68 262.3 196 63.3
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 1.0e-67 261.2 199 64.8
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.7e-67 260.4 204 66.2
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.7e-67 260.4 196 62.8
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.7e-67 260.4 193 65.8
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 1.7e-67 260.4 203 63.5
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 2.3e-67 260.0 213 58.2
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 6.6e-67 258.5 213 62.9
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 8.6e-67 258.1 202 66.3
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 8.6e-67 258.1 207 64.3
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.1e-66 257.7 204 65.7
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.5e-66 257.3 220 60.9
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.9e-66 256.9 204 65.7
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.9e-66 256.9 202 65.8
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 1.9e-66 256.9 194 63.4
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 2.5e-66 256.5 204 65.2
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.3e-66 256.1 204 65.7
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 4.3e-66 255.8 269 53.5
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 1.2e-65 254.2 201 63.7
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 2.1e-65 253.4 217 60.4
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 2.1e-65 253.4 199 63.8
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 4.7e-65 252.3 223 59.6
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 6.2e-65 251.9 217 60.4
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 8.1e-65 251.5 198 64.1
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 8.1e-65 251.5 218 58.7
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 1.8e-64 250.4 210 59.0
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 1.8e-64 250.4 191 62.3
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 2.4e-64 250.0 203 62.1
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 4.0e-64 249.2 201 62.2
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 4.0e-64 249.2 218 61.0
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 6.8e-64 248.4 202 62.4
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 3.4e-63 246.1 201 62.7
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 3.4e-63 246.1 197 60.4
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 2.4e-61 240.0 207 59.4
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 2.4e-61 240.0 195 61.0
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 5.4e-61 238.8 205 59.0
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 7.1e-61 238.4 199 63.8
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 9.2e-61 238.0 203 58.1
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 9.2e-61 238.0 207 58.9
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 1.2e-60 237.7 203 58.6
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 1.2e-60 237.7 207 58.0
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 2.1e-60 236.9 191 57.6
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 2.7e-60 236.5 203 58.1
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 2.7e-60 236.5 203 58.1
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.6e-60 235.7 194 63.4
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 1.3e-59 234.2 204 57.4
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.3e-59 233.4 206 58.3
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 5.1e-59 232.3 204 58.3
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 1.1e-58 231.1 217 54.4
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 1.5e-58 230.7 204 57.8
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 1.5e-58 230.7 204 56.9
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 4.3e-58 229.2 221 56.1
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.6e-58 228.8 215 54.4
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 7.3e-58 228.4 203 57.6
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 8.1e-57 224.9 210 54.8
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 1.1e-56 224.6 203 58.1
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.5e-55 220.7 201 56.2
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 3.4e-55 219.5 193 58.0
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 4.4e-55 219.2 161 64.0
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 3.2e-53 213.0 210 51.9
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.2e-53 213.0 193 54.9
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.2e-52 211.1 210 52.4
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 2.1e-52 210.3 210 50.5
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 1.3e-51 207.6 188 52.7
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.3e-51 207.6 198 57.1
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 9.6e-50 201.4 197 50.3
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 1.4e-48 197.6 151 64.9
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 3.1e-48 196.4 199 55.3
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.5e-47 194.1 205 49.8
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 9.3e-45 184.9 154 59.1
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 2.4e-37 160.2 206 44.2
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 3.5e-36 156.4 181 48.6
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 6.0e-36 155.6 131 64.1
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 7.9e-36 155.2 110 68.2
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 1.1e-34 151.4 149 56.4
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 1.1e-34 151.4 132 65.2
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.9e-34 150.6 141 57.4
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.7e-33 146.4 130 56.2
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 4.8e-33 146.0 133 62.4
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.5e-31 141.0 116 61.2
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 6.7e-27 125.6 140 50.7
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 8.7e-27 125.2 141 49.6
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 2.5e-26 123.6 188 37.2
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.7e-25 119.8 112 54.5
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 4.1e-24 116.3 149 49.7
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 1.3e-22 111.3 76 71.1
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.6e-20 102.8 130 47.7
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 7.9e-20 102.1 95 57.9
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-19 100.9 111 43.2
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 2.8e-17 93.6 70 65.7
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 7.9e-12 75.5 46 76.1
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 5.3e-08 62.8 85 34.1
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.3e-08 62.8 64 53.1
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.4e-07 60.1 66 48.5
MCO01G622 Micromonas commoda HOM05D004023 ORTHO05D004681 1.3e-06 58.2 97 32.0
Migut.J01418 Erythranthe guttata HOM05D005733 ORTHO05D007442 5.0e-06 56.2 86 32.6
Eucgr.C01245 Eucalyptus grandis HOM05D005733 ORTHO05D007442 5.0e-06 56.2 78 30.8
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 8.5e-06 55.5 83 38.6
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 8.5e-06 55.5 83 38.6


User provided reference genes

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