Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 2.7e-166 588.6 291 100.0
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 7.5e-84 314.7 281 59.8
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 2.1e-62 243.4 267 52.8
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 4.7e-62 242.3 294 48.6
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 6.1e-62 241.9 293 47.1
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 1.0e-61 241.1 283 46.6
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 2.0e-60 236.9 273 51.3
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 3.7e-59 232.6 276 47.5
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 2.3e-56 223.4 294 44.9
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 3.0e-56 223.0 281 45.6
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 4.3e-55 219.2 294 46.3
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 5.6e-55 218.8 247 47.4
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 2.3e-53 213.4 224 51.8
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 8.9e-53 211.5 275 42.5
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 5.8e-52 208.8 248 46.4
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 9.8e-52 208.0 279 43.7
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 2.9e-51 206.5 290 43.1
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 8.3e-51 204.9 280 44.3
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 2.4e-50 203.4 306 40.8
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 3.2e-50 203.0 247 46.6
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 9.2e-50 201.4 251 44.2
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 2.7e-49 199.9 269 43.1
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 2.7e-49 199.9 267 45.7
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 1.0e-48 198.0 280 42.9
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 3.0e-48 196.4 275 44.4
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 6.6e-48 195.3 274 43.4
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 2.1e-46 190.3 229 47.6
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 9.2e-42 174.9 259 42.9
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 7.8e-41 171.8 246 40.2
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 9.6e-39 164.9 289 38.4
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 1.2e-38 164.5 288 35.4
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 1.2e-38 164.5 253 39.5
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 9.9e-36 154.8 254 42.9
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 4.2e-34 149.4 239 41.8
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 2.1e-33 147.1 199 41.7
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 1.9e-31 140.6 150 48.0
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 1.2e-28 131.3 121 56.2
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 7.6e-28 128.6 257 32.3
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 3.5e-25 119.8 250 34.8
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 7.8e-25 118.6 141 47.5
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 1.1e-21 108.2 259 30.5
AL6G43670 Arabidopsis lyrata HOM05D012304 ORTHO05D010377 2.6e-20 103.6 243 30.9
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 3.8e-19 99.8 249 30.5
Sp6g07500 Schrenkiella parvula HOM05D012304 ORTHO05D010377 9.3e-18 95.1 251 29.1
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 1.2e-17 94.7 252 30.2
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 2.1e-17 94.0 88 46.6
AT4G09970 Arabidopsis thaliana HOM05D012304 ORTHO05D010377 5.6e-15 85.9 243 29.2
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 1.3e-14 84.7 253 28.9
BcaB05g23938 Brassica carinata HOM05D012304 ORTHO05D010377 9.0e-13 78.6 280 26.8
SMO236G0128 Selaginella moellendorffii HOM05D008742 ORTHO05D010377 2.6e-12 77.0 230 28.7
SGA_v2.0_scaffold24G10618 Striga asiatica HOM05D000065 ORTHO05D000162 2.2e-11 73.9 109 41.3
BraA02t07692Z Brassica rapa HOM05D012304 ORTHO05D010377 2.7e-09 67.0 291 23.4
BolSC33t60634H Brassica oleracea HOM05D012304 ORTHO05D010377 6.0e-09 65.9 293 24.2
Mapoly0060s0075 Marchantia polymorpha HOM05D020309 ORTHO05D010377 6.0e-09 65.9 289 23.9
A02p26830 Brassica napus HOM05D012304 ORTHO05D010377 2.3e-08 63.9 104 35.6
Pp3c7_20860 Physcomitrium patens HOM05D020309 ORTHO05D010377 3.3e-07 60.1 149 26.8
Pp3c3_11780 Physcomitrium patens HOM05D020309 ORTHO05D010377 4.3e-07 59.7 281 22.1
CARHR260950 Cardamine hirsuta HOM05D012304 ORTHO05D010377 7.4e-07 58.9 151 28.5
BcaC03g16452 Brassica carinata HOM05D012304 ORTHO05D010377 4.8e-06 56.2 297 23.2
C02p42700 Brassica napus HOM05D012304 ORTHO05D010377 4.8e-06 56.2 297 23.2


User provided reference genes

Program Settings