Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00065 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 2.3e-63 245.4 118 100.0
COL.COLO4_21695 Corchorus olitorius HOM05D004409 ORTHO05D005292 4.3e-30 134.8 84 65.5
Ciclev10033339m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.8e-29 132.1 84 65.5
ECA240G1407 Erigeron canadensis HOM05D004409 ORTHO05D005292 6.2e-29 131.0 93 62.4
Gorai.008G230500 Gossypium raimondii HOM05D004409 ORTHO05D005292 8.1e-29 130.6 115 54.8
Hund27103 Selenicereus undatus HOM05D004409 ORTHO05D005292 8.1e-29 130.6 104 54.8
Gohir.A12G212400 Gossypium hirsutum HOM05D004409 ORTHO05D005292 1.1e-28 130.2 115 53.9
DCAR_003519 Daucus carota HOM05D004409 ORTHO05D005292 1.4e-28 129.8 83 63.9
Gohir.D12G214900 Gossypium hirsutum HOM05D004409 ORTHO05D005292 1.4e-28 129.8 115 54.8
Actinidia31492 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.8e-28 129.4 112 53.6
Potri.003G084000 Populus trichocarpa HOM05D004409 ORTHO05D005292 3.1e-28 128.6 106 54.7
Dinv28881 Davidia involucrata HOM05D004409 ORTHO05D005292 4.0e-28 128.3 119 50.4
TWI60G0543 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 4.0e-28 128.3 105 57.1
Manes.01G089900 Manihot esculenta HOM05D004409 ORTHO05D005292 8.9e-28 127.1 120 50.0
Peaxi162Scf00391g00715 Petunia axillaris HOM05D004409 ORTHO05D005292 8.9e-28 127.1 79 63.3
GSVIVG01004835001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.9e-28 127.1 106 56.6
CSS0044628 Camellia sinensis var. sinensis HOM05D004409 ORTHO05D005292 1.5e-27 126.3 107 54.2
Atru.chr9.1197 Acer truncatum HOM05D004409 ORTHO05D005292 4.4e-27 124.8 113 49.6
Thecc.03G239100 Theobroma cacao HOM05D004409 ORTHO05D005292 4.4e-27 124.8 107 56.1
Ciclev10022946m.g Citrus clementina HOM05D004409 ORTHO05D005292 7.6e-27 124.0 107 55.1
Duzib205G0528 Durio zibethinus HOM05D004409 ORTHO05D005292 7.6e-27 124.0 106 56.6
EL10Ac1g00121 Beta vulgaris HOM05D004409 ORTHO05D005292 1.3e-26 123.2 115 48.7
Sabra03G0054600 Salix brachista HOM05D004409 ORTHO05D005292 1.3e-26 123.2 106 51.9
Actinidia10866 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.7e-26 122.9 106 50.9
Ciclev10030379m.g Citrus clementina HOM05D004409 ORTHO05D005292 3.8e-26 121.7 83 60.2
GSVIVG01004832001 Vitis vinifera HOM05D004409 ORTHO05D005292 3.8e-26 121.7 85 63.5
Aqoxy3G02644 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 4.9e-26 121.3 104 51.9
COL.COLO4_06685 Corchorus olitorius HOM05D004409 ORTHO05D005292 6.4e-26 120.9 105 55.2
Gohir.D13G124300 Gossypium hirsutum HOM05D004409 ORTHO05D005292 8.4e-26 120.6 83 57.8
QL12p008592 Quercus lobata HOM05D004409 ORTHO05D005292 1.1e-25 120.2 110 48.2
Thecc.03G144700 Theobroma cacao HOM05D004409 ORTHO05D005292 1.1e-25 120.2 105 51.4
GSVIVG01004822001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.9e-25 119.4 100 53.0
GSVIVG01004827001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.9e-25 119.4 100 53.0
TAR636G0884 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.4e-25 119.0 115 46.1
DCAR_008327 Daucus carota HOM05D004409 ORTHO05D005292 4.2e-25 118.2 83 60.2
Cc08_g11210 Coffea canephora HOM05D004409 ORTHO05D005292 5.4e-25 117.9 85 60.0
Duzib068G1042 Durio zibethinus HOM05D004409 ORTHO05D005292 5.4e-25 117.9 117 51.3
Thecc.08G189000 Theobroma cacao HOM05D004409 ORTHO05D005292 7.1e-25 117.5 109 48.6
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 2.7e-24 115.5 104 51.0
HanXRQChr03g0089681 Helianthus annuus HOM05D004409 ORTHO05D005292 3.5e-24 115.2 101 49.5
GSVIVG01004836001 Vitis vinifera HOM05D004409 ORTHO05D005292 3.5e-24 115.2 119 44.5
HanXRQChr13g0419061 Helianthus annuus HOM05D004409 ORTHO05D005292 4.6e-24 114.8 110 48.2
Nitab4.5_0000185g0190 Nicotiana tabacum HOM05D004409 ORTHO05D005292 4.6e-24 114.8 111 45.9
Thecc.03G144900 Theobroma cacao HOM05D004409 ORTHO05D005292 4.6e-24 114.8 103 51.5
CAN.G845.22 Capsicum annuum HOM05D004409 ORTHO05D005292 7.8e-24 114.0 100 51.0
Duzib205G0410 Durio zibethinus HOM05D004409 ORTHO05D005292 1.0e-23 113.6 106 50.0
FAN10G3781 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.0e-23 113.6 106 46.2
Lsat_1_v5_gn_6_94501 Lactuca sativa HOM05D004409 ORTHO05D005292 1.0e-23 113.6 100 48.0
TWI39G0193 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.0e-23 113.6 106 46.2
TWI39G0310 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.0e-23 113.6 106 46.2
Actinidia01026 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.3e-23 113.2 103 47.6
Dinv34530 Davidia involucrata HOM05D004409 ORTHO05D005292 1.3e-23 113.2 118 47.5
Thecc.03G144800 Theobroma cacao HOM05D004409 ORTHO05D005292 1.3e-23 113.2 105 50.5
Ciclev10022894m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.7e-23 112.8 114 44.7
ECA240G0589 Erigeron canadensis HOM05D004409 ORTHO05D005292 1.7e-23 112.8 98 46.9
Peaxi162Scf00102g00085 Petunia axillaris HOM05D004409 ORTHO05D005292 1.7e-23 112.8 109 45.9
THA.LOC104809923 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 2.3e-23 112.5 85 54.1
TWI39G0462 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 2.3e-23 112.5 106 45.3
Atru.chr6.1971 Acer truncatum HOM05D004409 ORTHO05D005292 3.0e-23 112.1 104 47.1
RcHm_v2.0_Chr1g0372951 Rosa chinensis HOM05D004409 ORTHO05D005292 3.0e-23 112.1 101 48.5
Duzib068G0789 Durio zibethinus HOM05D004409 ORTHO05D005292 3.9e-23 111.7 109 49.5
Prupe.5G054600 Prunus persica HOM05D004409 ORTHO05D005292 3.9e-23 111.7 105 49.5
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 5.1e-23 111.3 113 46.0
RcHm_v2.0_Chr1g0328171 Rosa chinensis HOM05D004409 ORTHO05D005292 5.1e-23 111.3 105 46.7
TAR375G0026 Trochodendron aralioides HOM05D004409 ORTHO05D005292 8.7e-23 110.5 120 48.3
CANSAT21G0737 Cannabis sativa HOM05D004409 ORTHO05D005292 1.1e-22 110.2 85 54.1
Cpa.g.sc13.213 Carica papaya HOM05D004409 ORTHO05D005292 1.1e-22 110.2 83 55.4
FvH4_7g26400 Fragaria vesca HOM05D004409 ORTHO05D005292 1.1e-22 110.2 106 45.3
Prupe.7G057100 Prunus persica HOM05D004409 ORTHO05D005292 1.9e-22 109.4 108 47.2
Cfa012334 Carpinus fangiana HOM05D004409 ORTHO05D005292 2.5e-22 109.0 94 52.1
COL.COLO4_37301 Corchorus olitorius HOM05D004409 ORTHO05D005292 2.5e-22 109.0 103 46.6
Atru.chr9.1196 Acer truncatum HOM05D004409 ORTHO05D005292 3.3e-22 108.6 85 51.8
CANSAT56G2756 Cannabis sativa HOM05D004409 ORTHO05D005292 3.3e-22 108.6 115 47.8
Cfa012333 Carpinus fangiana HOM05D004409 ORTHO05D005292 3.3e-22 108.6 102 46.1
CANSAT21G0033 Cannabis sativa HOM05D004409 ORTHO05D005292 5.6e-22 107.8 106 46.2
CANSAT56G2887 Cannabis sativa HOM05D004409 ORTHO05D005292 5.6e-22 107.8 102 46.1
Eucgr.K00114 Eucalyptus grandis HOM05D004409 ORTHO05D005292 5.6e-22 107.8 81 53.1
Dinv25140 Davidia involucrata HOM05D004409 ORTHO05D005292 9.6e-22 107.1 112 44.6
GSVIVG01004838001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.3e-21 106.7 83 49.4
MELO3C014170.2 Cucumis melo HOM05D004409 ORTHO05D005292 2.1e-21 105.9 101 47.5
Sed0027041 Sechium edule HOM05D004409 ORTHO05D005292 2.8e-21 105.5 109 45.9
TAR375G0498 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.8e-21 105.5 117 47.9
MD07G1239500 Malus domestica HOM05D004409 ORTHO05D005292 3.6e-21 105.1 102 43.1
TAR375G0484 Trochodendron aralioides HOM05D004409 ORTHO05D005292 3.6e-21 105.1 118 45.8
ECA240G4009 Erigeron canadensis HOM05D004409 ORTHO05D005292 4.8e-21 104.8 88 51.1
Oeu019420.1 Olea europaea HOM05D004409 ORTHO05D005292 4.8e-21 104.8 112 42.0
RcHm_v2.0_Chr1g0328141 Rosa chinensis HOM05D004409 ORTHO05D005292 4.8e-21 104.8 107 43.9
TWI39G0819 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 4.8e-21 104.8 118 44.1
FAN10G4140 Fragaria x ananassa HOM05D004409 ORTHO05D005292 6.2e-21 104.4 85 51.8
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 6.2e-21 104.4 113 43.4
RcHm_v2.0_Chr1g0372991 Rosa chinensis HOM05D004409 ORTHO05D005292 6.2e-21 104.4 107 43.9
FvH4_7g26430 Fragaria vesca HOM05D004409 ORTHO05D005292 8.1e-21 104.0 106 46.2
FAN01G0604 Fragaria x ananassa HOM05D004409 ORTHO05D005292 8.1e-21 104.0 85 51.8
HanXRQChr13g0419051 Helianthus annuus HOM05D004409 ORTHO05D005292 8.1e-21 104.0 100 42.0
GSVIVG01013894001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.1e-21 104.0 88 52.3
MELO3C013895.2 Cucumis melo HOM05D004409 ORTHO05D005292 1.8e-20 102.8 118 42.4
CANSAT56G4079 Cannabis sativa HOM05D004409 ORTHO05D005292 2.4e-20 102.4 102 47.1
FAN03G2468 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.4e-20 102.4 104 45.2
HanXRQChr03g0089691 Helianthus annuus HOM05D004409 ORTHO05D005292 2.4e-20 102.4 108 44.4
PGR142G3629 Punica granatum HOM05D004409 ORTHO05D005292 3.1e-20 102.1 105 42.9
Aa31LG9G14800 Aethionema arabicum HOM05D004409 ORTHO05D005292 5.3e-20 101.3 78 52.6
ATR1136G215 Amborella trichopoda HOM05D004409 ORTHO05D005292 5.3e-20 101.3 103 42.7
CANSAT56G0658 Cannabis sativa HOM05D004409 ORTHO05D005292 5.3e-20 101.3 105 45.7
ClCG10G002150 Citrullus lanatus HOM05D004409 ORTHO05D005292 5.3e-20 101.3 100 45.0
COL.COLO4_37302 Corchorus olitorius HOM05D004409 ORTHO05D005292 5.3e-20 101.3 113 42.5
CsaV3_3G002240 Cucumis sativus L. HOM05D004409 ORTHO05D005292 6.9e-20 100.9 118 43.2
GSVIVG01024506001 Vitis vinifera HOM05D004409 ORTHO05D005292 6.9e-20 100.9 102 47.1
CsaV3_3G004710 Cucumis sativus L. HOM05D004409 ORTHO05D005292 9.0e-20 100.5 106 44.3
Ciclev10033338m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.2e-19 100.1 99 50.5
THA.LOC104816486 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 1.2e-19 100.1 115 38.3
PGR042G3450 Punica granatum HOM05D004409 ORTHO05D005292 1.5e-19 99.8 121 36.4
GSVIVG01013815001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.5e-19 99.8 116 43.1
ATR1136G211 Amborella trichopoda HOM05D004409 ORTHO05D005292 2.0e-19 99.4 106 44.3
COL.COLO4_32251 Corchorus olitorius HOM05D004409 ORTHO05D005292 2.0e-19 99.4 103 44.7
Lsat_1_v5_gn_6_94401 Lactuca sativa HOM05D004409 ORTHO05D005292 2.0e-19 99.4 106 44.3
GSVIVG01013816001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.0e-19 99.4 88 50.0
DCAR_005587 Daucus carota HOM05D004409 ORTHO05D005292 2.6e-19 99.0 102 45.1
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 2.6e-19 99.0 100 42.0
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 3.4e-19 98.6 99 44.4
GSVIVG01024502001 Vitis vinifera HOM05D004409 ORTHO05D005292 5.8e-19 97.8 108 43.5
FAN06G5092 Fragaria x ananassa HOM05D004409 ORTHO05D005292 7.6e-19 97.4 101 45.5
FAN17G1151 Fragaria x ananassa HOM05D004409 ORTHO05D005292 7.6e-19 97.4 105 44.8
PGSC0003DMG400026212 Solanum tuberosum HOM05D004409 ORTHO05D005292 7.6e-19 97.4 106 42.5
Cc06_g12260 Coffea canephora HOM05D004409 ORTHO05D005292 9.9e-19 97.1 119 40.3
Migut.H01906 Erythranthe guttata HOM05D004409 ORTHO05D005292 1.7e-18 96.3 118 39.0
Thecc.07G180600 Theobroma cacao HOM05D004409 ORTHO05D005292 1.7e-18 96.3 99 43.4
Migut.J00932 Erythranthe guttata HOM05D004409 ORTHO05D005292 2.2e-18 95.9 104 43.3
ATR1136G026 Amborella trichopoda HOM05D004409 ORTHO05D005292 3.8e-18 95.1 73 54.8
Actinidia25914 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.4e-17 93.2 107 41.1
BcaB04g18966 Brassica carinata HOM05D004409 ORTHO05D005292 1.4e-17 93.2 87 47.1
Haze_08359 Corylus avellana HOM05D004409 ORTHO05D005292 1.4e-17 93.2 93 46.2
BcaC01g03728 Brassica carinata HOM05D004409 ORTHO05D005292 1.9e-17 92.8 87 47.1
TAR375G0880 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.4e-17 92.4 111 44.1
Sp6g08250 Schrenkiella parvula HOM05D004409 ORTHO05D005292 3.2e-17 92.0 88 45.5
GSVIVG01013825001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.2e-17 91.7 117 40.2
CAN.G572.17 Capsicum annuum HOM05D004409 ORTHO05D005292 7.1e-17 90.9 102 43.1
Oeu056339.1 Olea europaea HOM05D004409 ORTHO05D005292 7.1e-17 90.9 95 40.0
Migut.H01907 Erythranthe guttata HOM05D004409 ORTHO05D005292 9.3e-17 90.5 119 38.7
SGA_v2.0_scaffold91G28102 Striga asiatica HOM05D004409 ORTHO05D005292 9.3e-17 90.5 106 43.4
Eucgr.K00115 Eucalyptus grandis HOM05D004409 ORTHO05D005292 1.2e-16 90.1 89 52.8
Gorai.013G138900 Gossypium raimondii HOM05D004409 ORTHO05D005292 1.6e-16 89.7 63 58.7
MD07G1239800 Malus domestica HOM05D004409 ORTHO05D005292 1.6e-16 89.7 85 45.9
MSTRG.27238 Avicennia marina HOM05D004409 ORTHO05D005292 3.5e-16 88.6 120 40.0
HanXRQChr13g0418291 Helianthus annuus HOM05D004409 ORTHO05D005292 4.6e-16 88.2 106 38.7
MD07G1239700 Malus domestica HOM05D004409 ORTHO05D005292 6.0e-16 87.8 104 40.4
Carub.0006s2782 Capsella rubella HOM05D004409 ORTHO05D005292 7.9e-16 87.4 91 47.3
Oeu006074.1 Olea europaea HOM05D004409 ORTHO05D005292 1.0e-15 87.0 102 38.2
C03p49230 Brassica napus HOM05D004409 ORTHO05D005292 1.8e-15 86.3 85 42.4
A03p40420 Brassica napus HOM05D004409 ORTHO05D005292 3.9e-15 85.1 82 45.1
BolC3t17205H Brassica oleracea HOM05D004409 ORTHO05D005292 3.9e-15 85.1 82 45.1
BraA03t13197Z Brassica rapa HOM05D004409 ORTHO05D005292 3.9e-15 85.1 82 45.1
CARHR260260 Cardamine hirsuta HOM05D004409 ORTHO05D005292 5.1e-15 84.7 118 42.4
ATR0745G048 Amborella trichopoda HOM05D004409 ORTHO05D005292 2.1e-13 79.3 113 34.5
BcaB01g02799 Brassica carinata HOM05D004409 ORTHO05D005292 1.8e-12 76.3 91 39.6
CAN.G572.18 Capsicum annuum HOM05D004409 ORTHO05D005292 6.9e-12 74.3 104 32.7
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 6.4e-10 67.8 102 36.3
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 6.4e-10 67.8 102 36.3
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 2.4e-09 65.9 101 35.6
Nn7g36459 Nelumbo nucifera HOM05D002739 ORTHO05D002877 5.5e-09 64.7 119 31.1
THA.LOC104800444 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 7.1e-09 64.3 101 33.7
Nn2g15045 Nelumbo nucifera HOM05D002739 ORTHO05D002877 2.7e-08 62.4 86 31.4
Actinidia16366 Actinidia chinensis HOM05D002739 ORTHO05D002877 3.5e-08 62.0 75 38.7
Ciclev10017226m.g Citrus clementina HOM05D002739 ORTHO05D002877 7.9e-08 60.8 108 31.5
Cfa012335 Carpinus fangiana HOM05D004409 ORTHO05D005292 1.0e-07 60.5 103 34.0
Aa31sc407G10 Aethionema arabicum HOM05D002739 ORTHO05D002877 1.8e-07 59.7 109 30.3
Duzib168G0444 Durio zibethinus HOM05D002739 ORTHO05D002877 1.8e-07 59.7 84 38.1
Aqoxy2G00281 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 2.3e-07 59.3 112 29.5
PSO339G0568 Papaver somniferum HOM05D002739 ORTHO05D002877 3.0e-07 58.9 81 33.3
Nn7g36442 Nelumbo nucifera HOM05D002739 ORTHO05D002877 3.9e-07 58.5 95 26.3
Nn7g36457 Nelumbo nucifera HOM05D002739 ORTHO05D002877 3.9e-07 58.5 95 26.3
Nn7g38448 Nelumbo nucifera HOM05D002739 ORTHO05D002877 3.9e-07 58.5 95 26.3
MD02G1296300 Malus domestica HOM05D002739 ORTHO05D002877 6.7e-07 57.8 74 35.1
Nn7g36443 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.1e-06 57.0 83 32.5
Nn7g38449 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.1e-06 57.0 83 32.5
PSO384G1879 Papaver somniferum HOM05D002739 ORTHO05D002877 1.1e-06 57.0 81 32.1
AT5G56480 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 1.5e-06 56.6 84 31.0
PSO339G0161 Papaver somniferum HOM05D002739 ORTHO05D002877 1.5e-06 56.6 112 30.4
RcHm_v2.0_Chr7g0218541 Rosa chinensis HOM05D002739 ORTHO05D002877 1.5e-06 56.6 110 30.9
Thecc.09G243000 Theobroma cacao HOM05D002739 ORTHO05D002877 1.9e-06 56.2 81 33.3
COL.COLO4_36502 Corchorus olitorius HOM05D002739 ORTHO05D002877 3.3e-06 55.5 74 32.4
Lj4g0026950 Lotus japonicus HOM05D002739 ORTHO05D002877 4.3e-06 55.1 107 26.2
Ciclev10017233m.g Citrus clementina HOM05D002739 ORTHO05D002877 5.6e-06 54.7 108 27.8
PSO339G6632 Papaver somniferum HOM05D002739 ORTHO05D002877 5.6e-06 54.7 109 28.4
Nn2g15046 Nelumbo nucifera HOM05D002739 ORTHO05D002877 7.4e-06 54.3 87 28.7
Potri.009G048900 Populus trichocarpa HOM05D002739 ORTHO05D002877 7.4e-06 54.3 108 30.6


User provided reference genes

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