Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 2.5e-102 375.6 202 100.0
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 4.7e-53 211.8 262 51.1
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 4.6e-48 195.3 278 46.8
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 1.5e-46 190.3 284 44.0
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 9.6e-46 187.6 283 43.5
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 1.2e-45 187.2 279 44.8
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 4.7e-45 185.3 265 44.2
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 8.1e-45 184.5 283 41.0
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 1.1e-44 184.1 286 41.6
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.8e-44 183.3 266 43.2
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 8.9e-44 181.0 266 42.9
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 7.6e-43 177.9 290 41.0
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 1.3e-42 177.2 277 42.6
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 2.2e-42 176.4 280 40.7
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 2.2e-42 176.4 281 42.3
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 4.9e-42 175.3 285 40.0
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 6.4e-42 174.9 273 42.5
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.4e-41 173.7 273 43.2
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 3.2e-41 172.6 246 43.9
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 3.2e-41 172.6 284 39.1
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 4.2e-41 172.2 251 43.8
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 1.6e-40 170.2 265 41.1
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 2.1e-40 169.9 282 40.8
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 2.7e-40 169.5 284 39.8
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 1.0e-39 167.5 292 38.7
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.1e-39 165.2 284 38.4
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 1.9e-38 163.3 284 38.0
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.9e-38 163.3 289 38.1
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 5.6e-38 161.8 281 38.4
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 7.3e-38 161.4 251 42.2
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 1.3e-37 160.6 282 37.9
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 1.6e-37 160.2 251 42.6
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 1.6e-37 160.2 282 37.6
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 2.1e-37 159.8 214 45.8
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 2.1e-37 159.8 258 40.7
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 6.2e-37 158.3 280 38.2
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 1.1e-36 157.5 251 41.4
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 1.1e-36 157.5 280 37.9
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 1.8e-36 156.8 251 41.0
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 2.4e-36 156.4 254 40.2
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 3.1e-36 156.0 323 36.2
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 1.2e-35 154.1 284 36.3
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 1.5e-35 153.7 254 40.2
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 3.4e-35 152.5 245 40.0
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 9.9e-35 151.0 261 38.7
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 2.9e-34 149.4 153 55.6
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 2.9e-34 149.4 181 50.3
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 6.4e-34 148.3 266 38.7
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 6.4e-34 148.3 258 38.0
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 8.4e-34 147.9 259 40.9
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 1.4e-33 147.1 274 36.1
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 2.4e-33 146.4 263 38.0
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 3.2e-33 146.0 289 36.0
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 4.2e-33 145.6 269 39.0
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 5.4e-33 145.2 269 36.8
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 7.1e-33 144.8 284 37.7
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 9.3e-33 144.4 274 36.1
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 1.0e-31 141.0 279 36.6
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 2.3e-31 139.8 279 36.6
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 8.7e-31 137.9 279 35.1
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 1.3e-29 134.0 302 34.1
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 3.6e-29 132.5 283 35.3
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 1.4e-28 130.6 283 33.9
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 1.4e-28 130.6 125 58.4
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 1.4e-28 130.6 276 34.1
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 1.8e-28 130.2 356 31.7
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.8e-28 130.2 128 60.9
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 6.9e-28 128.3 186 43.5
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.5e-27 127.1 282 35.5
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.5e-27 127.1 282 35.5
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 2.0e-27 126.7 264 33.3
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 2.6e-27 126.3 128 54.7
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 7.6e-27 124.8 330 30.0
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 9.9e-27 124.4 142 54.2
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 1.3e-26 124.0 266 37.2
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 1.7e-26 123.6 257 33.5
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 2.2e-26 123.2 128 53.1
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 5.4e-25 118.6 312 32.1
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 2.7e-24 116.3 134 52.2
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 5.1e-23 112.1 269 34.9
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 5.1e-23 112.1 295 32.5
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 6.7e-23 111.7 129 50.4
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 8.7e-23 111.3 128 50.8
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.5e-22 110.5 128 50.8
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 5.6e-22 108.6 202 35.1
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 1.1e-20 104.4 229 34.5
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 1.4e-20 104.0 142 45.1
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 5.3e-20 102.1 240 32.1
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 1.2e-19 100.9 142 45.8
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 6.5e-18 95.1 222 32.0
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 2.5e-17 93.2 278 32.0
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 3.5e-16 89.4 90 56.7
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 3.5e-16 89.4 224 32.6
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 1.8e-15 87.0 136 42.6
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.8e-15 87.0 93 50.5
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.5e-14 83.2 173 35.3
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 4.8e-13 79.0 56 60.7
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 6.2e-13 78.6 59 64.4
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 1.1e-12 77.8 272 28.3
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 3.1e-12 76.3 86 54.7
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 1.2e-11 74.3 82 47.6
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 2.0e-11 73.6 100 42.0
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 2.0e-11 73.6 63 57.1
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 3.4e-11 72.8 99 44.4
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 4.5e-11 72.4 73 49.3
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 4.5e-11 72.4 99 43.4
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 1.7e-10 70.5 224 25.4
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 6.5e-10 68.6 80 48.8
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 5.5e-09 65.5 119 35.3
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 5.5e-09 65.5 93 43.0
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.2e-08 64.3 55 54.5
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 1.2e-08 64.3 159 30.2
AagrBONN_evm.TU.Sc2ySwM_362.2028 Anthoceros agrestis HOM05D006511 ORTHO05D007567 3.9e-07 59.3 167 26.9
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 2.5e-06 56.6 254 26.8
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 7.4e-06 55.1 48 62.5


User provided reference genes

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