Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 0.0e+00 1329.7 738 100.0
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 3.5e-263 911.8 739 71.3
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 1.1e-245 853.6 708 67.2
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 2.4e-243 845.9 738 64.5
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 5.3e-243 844.7 738 63.8
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 5.8e-242 841.3 737 63.6
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 7.1e-240 834.3 707 65.8
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 1.2e-239 833.6 740 63.9
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 2.7e-239 832.4 738 64.0
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 6.7e-238 827.8 740 63.5
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 2.6e-234 815.8 709 64.7
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 7.1e-232 807.7 674 67.5
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 2.1e-231 806.2 738 61.7
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 1.3e-230 803.5 738 62.3
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 2.3e-230 802.7 741 61.7
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 2.5e-229 799.3 739 62.5
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 1.3e-228 797.0 825 57.0
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 6.2e-228 794.7 767 60.5
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 1.4e-227 793.5 674 66.9
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 6.9e-227 791.2 743 61.4
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 2.0e-226 789.6 742 61.3
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 4.5e-226 788.5 678 64.7
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 4.5e-226 788.5 738 62.2
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 4.5e-226 788.5 741 61.1
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 5.8e-226 788.1 739 61.6
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 1.3e-225 786.9 745 61.6
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 8.4e-225 784.3 740 61.2
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.4e-224 783.5 687 63.3
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 2.1e-223 779.6 695 62.7
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 1.3e-222 776.9 741 60.7
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 2.3e-222 776.2 738 62.7
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 3.0e-222 775.8 709 63.0
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 3.9e-222 775.4 741 61.3
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 6.7e-222 774.6 720 62.1
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 2.5e-221 772.7 763 59.9
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 7.4e-221 771.2 738 59.8
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 9.6e-221 770.8 742 61.6
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 9.6e-221 770.8 738 60.7
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 4.8e-220 768.5 698 61.2
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 1.4e-219 766.9 736 58.3
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 5.9e-218 761.5 736 58.2
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 5.9e-218 761.5 741 60.2
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.0e-217 760.8 741 58.7
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 1.0e-217 760.8 741 60.1
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 3.8e-217 758.8 738 59.2
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 3.2e-216 755.7 679 63.5
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 4.2e-216 755.4 701 61.1
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 7.2e-216 754.6 736 57.3
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 9.3e-216 754.2 738 59.1
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 6.1e-215 751.5 736 57.2
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 7.9e-215 751.1 708 60.5
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 7.9e-215 751.1 740 59.5
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 1.3e-214 750.4 741 58.6
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 1.8e-214 750.0 738 59.3
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 2.3e-214 749.6 742 58.8
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 3.0e-214 749.2 748 58.2
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 3.9e-214 748.8 737 57.4
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 5.1e-214 748.4 699 60.9
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 8.7e-214 747.7 740 58.4
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 9.7e-213 744.2 737 56.6
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 8.2e-212 741.1 707 60.4
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 1.1e-211 740.7 701 61.3
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 1.8e-211 740.0 739 58.7
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 4.1e-211 738.8 702 60.4
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 1.2e-210 737.3 736 56.9
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 2.0e-210 736.5 741 58.2
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 7.7e-210 734.6 738 56.9
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 3.6e-207 725.7 829 54.4
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 3.0e-206 722.6 674 60.5
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 1.7e-204 716.8 738 55.8
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 1.0e-201 707.6 736 55.2
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 9.4e-200 701.0 781 55.6
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 1.2e-199 700.7 738 55.1
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 1.2e-199 700.7 738 55.1
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 1.6e-194 683.7 672 58.8
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 6.5e-193 678.3 758 53.3
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 8.5e-193 677.9 738 53.9
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 9.4e-192 674.5 744 53.2
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 1.2e-191 674.1 676 57.1
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 4.7e-191 672.2 711 55.3
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.2e-189 667.5 740 55.8
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 9.1e-187 657.9 747 54.5
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 3.2e-184 649.4 738 53.7
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 4.2e-184 649.0 738 52.2
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 1.2e-183 647.5 736 51.9
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 4.7e-183 645.6 649 59.5
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 4.4e-181 639.0 753 51.0
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 7.5e-181 638.3 738 52.4
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 2.0e-170 603.6 678 52.9
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 3.2e-163 579.7 676 52.8
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 3.5e-162 576.2 577 57.5
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 2.0e-149 533.9 602 54.2
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 1.3e-127 461.5 359 70.5
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 9.3e-123 445.3 363 68.0
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 9.3e-123 445.3 515 53.4
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 2.6e-117 427.2 598 47.0
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 7.6e-117 425.6 444 59.2
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 2.9e-116 423.7 400 60.0
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 8.7e-113 412.1 301 72.4
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 5.7e-104 382.9 271 74.9
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 4.2e-91 340.1 358 56.1
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 1.1e-88 332.0 716 34.1
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 5.2e-81 306.6 458 45.6
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 7.0e-78 296.2 661 33.0
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.1e-74 284.6 345 52.5
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 6.1e-74 283.1 706 31.4
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 1.7e-71 275.0 666 28.8
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 1.1e-70 272.3 350 48.0
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 2.1e-66 258.1 277 55.2
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 6.1e-66 256.5 663 33.9
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.0e-61 241.5 697 29.0
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 7.7e-61 239.6 514 37.4
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 2.2e-31 141.7 136 61.8
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.8e-25 122.1 144 51.4
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.2e-24 119.4 84 65.5
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 4.9e-23 114.0 158 46.2
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 3.5e-21 107.8 510 23.7
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 1.6e-18 99.0 105 56.2
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.1e-18 98.6 119 46.2
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.1e-17 94.7 132 42.4
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 6.9e-17 93.6 157 42.0
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.4e-14 85.9 54 81.5
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 1.2e-13 82.8 118 37.3
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 5.1e-12 77.4 269 29.7
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 1.9e-11 75.5 56 66.1
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 3.3e-11 74.7 110 42.7
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 5.6e-11 73.9 67 55.2
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 2.1e-10 72.0 118 43.2
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 1.1e-09 69.7 94 45.7
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 2.2e-07 62.0 72 50.0
PSO017G4247 Papaver somniferum HOM05D006009 ORTHO05D007389 1.1e-06 59.7 118 38.1
MD15G1442500 Malus domestica HOM05D006009 ORTHO05D007389 3.2e-06 58.2 38 63.2


User provided reference genes

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