Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 0.0e+00 1221.5 643 100.0
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 2.8e-232 808.9 644 66.3
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 6.2e-224 781.2 643 64.5
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 5.5e-212 741.5 666 59.8
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 2.7e-211 739.2 600 62.8
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 5.1e-210 734.9 647 58.9
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 5.1e-210 734.9 582 63.1
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 6.7e-210 734.6 651 59.4
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 2.9e-205 719.2 590 61.5
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.9e-205 719.2 664 57.5
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 5.5e-204 714.9 654 57.5
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 1.0e-202 710.7 652 58.6
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.0e-202 710.7 664 56.3
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.1e-201 707.2 660 57.3
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.5e-201 706.8 631 60.4
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.2e-200 703.0 652 57.2
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 2.8e-200 702.6 595 60.8
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 8.2e-200 701.0 649 60.1
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.4e-199 700.3 636 58.2
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 3.4e-198 695.7 636 57.9
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 7.7e-198 694.5 635 58.1
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 1.0e-197 694.1 600 60.3
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 2.9e-197 692.6 629 60.1
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 1.4e-196 690.3 657 56.5
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 3.2e-196 689.1 655 57.9
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 3.6e-195 685.6 655 57.7
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 4.6e-195 685.3 587 58.9
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 1.0e-194 684.1 651 57.1
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 2.5e-193 679.5 631 59.0
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 4.3e-193 678.7 650 58.0
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 8.2e-192 674.5 655 56.5
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 2.4e-191 672.9 649 57.6
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 3.4e-190 669.1 647 56.1
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 3.8e-189 665.6 644 55.7
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 5.0e-189 665.2 667 57.1
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 2.5e-188 662.9 632 57.1
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 5.5e-188 661.8 631 59.6
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 5.5e-188 661.8 646 55.3
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 2.1e-187 659.8 646 56.5
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 4.7e-187 658.7 656 55.6
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 6.1e-187 658.3 663 55.4
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 6.1e-187 658.3 594 56.4
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 7.9e-187 657.9 649 55.9
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 1.4e-186 657.1 654 57.0
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 5.1e-186 655.2 645 56.4
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 6.7e-186 654.8 686 54.2
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 3.3e-185 652.5 685 53.6
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 5.7e-185 651.7 659 56.1
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 9.7e-185 651.0 649 55.6
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 9.7e-185 651.0 641 54.6
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 8.2e-184 647.9 650 54.8
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 1.4e-183 647.1 655 56.6
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 5.3e-183 645.2 656 53.8
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 7.0e-183 644.8 658 54.3
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 7.0e-183 644.8 661 54.6
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.5e-182 643.7 600 56.2
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 2.0e-182 643.3 626 53.8
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 1.7e-181 640.2 652 53.4
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 5.0e-181 638.6 648 54.8
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 6.5e-181 638.3 438 70.8
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 4.2e-180 635.6 651 53.8
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 1.6e-179 633.6 647 54.9
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 6.1e-179 631.7 646 57.3
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 6.1e-179 631.7 646 57.3
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 8.8e-178 627.9 580 57.2
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 4.4e-177 625.5 653 55.7
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.2e-176 623.2 509 59.1
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 2.2e-176 623.2 645 55.8
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 8.2e-176 621.3 586 57.0
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 8.2e-176 621.3 573 55.7
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.8e-175 620.2 651 54.2
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.8e-175 620.2 642 53.6
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 3.1e-175 619.4 587 55.0
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.3e-175 618.6 595 54.8
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 5.3e-175 618.6 608 54.4
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.0e-175 618.2 593 55.1
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.0e-175 618.2 593 55.1
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-174 617.5 596 55.2
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 2.6e-174 616.3 580 55.7
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 7.7e-174 614.8 651 52.4
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 1.0e-173 614.4 653 53.1
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 2.2e-173 613.2 651 52.1
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 2.9e-173 612.8 657 52.7
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 8.5e-173 611.3 595 54.5
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 9.4e-172 607.8 662 52.4
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 2.1e-171 606.7 650 54.2
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 2.7e-171 606.3 531 57.1
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 3.6e-171 605.9 672 52.2
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 3.6e-171 605.9 656 51.4
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 3.4e-169 599.4 651 53.0
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 2.4e-167 593.2 503 60.8
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 8.0e-163 578.2 465 59.1
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.1e-159 567.8 640 51.6
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.8e-159 567.0 636 51.6
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 1.8e-159 567.0 642 51.1
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 2.4e-159 566.6 506 56.5
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 1.0e-157 561.2 636 51.3
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.4e-146 524.2 391 64.7
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 5.6e-140 502.3 525 51.0
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 2.3e-133 480.3 646 47.8
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 7.3e-132 475.3 353 64.0
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 4.1e-127 459.5 463 50.5
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.3e-124 449.9 529 43.5
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.5e-121 441.0 350 60.3
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 4.4e-121 439.5 426 50.5
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 5.4e-119 432.6 604 43.5
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 4.2e-111 406.4 502 43.6
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 3.5e-86 323.6 519 36.6
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 6.9e-82 309.3 665 29.5
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 7.2e-63 246.1 466 33.7
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 8.0e-54 216.1 562 27.9
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 9.8e-44 182.6 410 31.2
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 4.6e-25 120.6 97 58.8
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 4.6e-25 120.6 97 58.8
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 3.3e-23 114.4 97 56.7
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 2.0e-20 105.1 513 22.6


User provided reference genes

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