Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04358 Aquilegia oxysepala HOM05D006657 ORTHO05D005964 0.0e+00 2011.1 1030 100.0
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 9.7e-86 322.8 1203 30.5
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 2.6e-70 271.6 976 29.3
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 1.7e-69 268.9 1212 28.7
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 1.8e-68 265.4 1205 27.6
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 2.2e-53 215.3 1226 25.8
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 9.5e-49 199.9 1025 27.0
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 2.3e-42 178.7 1031 27.1
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 1.6e-40 172.6 990 25.9
TAR629G3494 Trochodendron aralioides HOM05D006657 ORTHO05D005964 5.2e-39 167.5 372 36.3
PSO170G0737 Papaver somniferum HOM05D006657 ORTHO05D005964 8.9e-39 166.8 814 26.3
TAR629G2606 Trochodendron aralioides HOM05D006657 ORTHO05D005964 8.9e-39 166.8 880 26.5
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 2.6e-38 165.2 1140 27.0
MBI04_g41177_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 9.8e-38 163.3 830 27.0
PSO782G1897 Papaver somniferum HOM05D006657 ORTHO05D005964 2.2e-37 162.2 960 24.6
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 1.4e-36 159.5 1268 25.2
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 1.9e-36 159.1 1032 25.5
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 9.2e-36 156.8 722 26.5
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 2.1e-35 155.6 1257 25.1
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 2.7e-35 155.2 1123 25.3
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 3.5e-35 154.8 1028 26.3
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 3.5e-35 154.8 1021 26.0
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 3.5e-35 154.8 1160 23.6
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 4.6e-35 154.5 1002 26.5
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 6.0e-35 154.1 1263 25.6
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 1.3e-34 152.9 1002 25.9
MBI04_g37612_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 3.3e-33 148.3 1084 25.5
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 3.3e-33 148.3 985 25.9
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 7.3e-33 147.1 1172 25.0
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 6.2e-32 144.1 748 25.5
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 2.0e-30 139.0 992 24.6
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 3.4e-30 138.3 777 26.0
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 5.8e-30 137.5 1064 25.8
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 1.7e-29 136.0 1012 25.0
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 3.7e-29 134.8 1192 24.7
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 2.4e-28 132.1 1024 25.3
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 3.2e-28 131.7 971 24.6
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 2.1e-27 129.0 460 30.0
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.3e-26 126.3 993 24.3
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.7e-26 125.9 996 25.0
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 2.3e-26 125.6 963 25.8
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 2.3e-26 125.6 999 24.1
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 6.6e-26 124.0 543 26.9
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 1.5e-25 122.9 1131 24.8
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 1.9e-25 122.5 1279 22.5
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 9.5e-25 120.2 271 32.5
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 2.1e-24 119.0 991 25.1
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 3.6e-24 118.2 1031 23.3
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 1.1e-23 116.7 491 28.5
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 2.4e-23 115.5 312 31.7
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 1.5e-22 112.8 1006 23.6
Phvul.009G038600 Phaseolus vulgaris HOM05D006657 ORTHO05D005964 1.5e-22 112.8 280 33.6
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 4.4e-22 111.3 1018 24.9
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 1.3e-21 109.8 691 25.6
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.7e-21 109.4 274 35.4
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 1.7e-21 109.4 223 37.2
TWI14G0251 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 2.2e-21 109.0 1063 24.3
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 2.9e-21 108.6 370 29.5
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 6.4e-21 107.5 371 28.6
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 6.4e-21 107.5 282 31.2
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 1.9e-20 105.9 1016 25.5
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 3.2e-20 105.1 521 26.7
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 7.1e-20 104.0 1013 23.7
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 9.2e-20 103.6 265 32.5
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 2.1e-19 102.4 291 32.0
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 2.7e-19 102.1 1015 23.2
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 4.6e-19 101.3 528 26.3
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 4.6e-19 101.3 365 27.9
HanXRQChr08g0226001 Helianthus annuus HOM05D006657 ORTHO05D005964 4.6e-19 101.3 555 25.2
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 4.6e-19 101.3 291 31.6
MBI12_g20086_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 7.8e-19 100.5 662 25.5
Sc13g0010540 Simmondsia chinensis HOM05D006657 ORTHO05D005964 7.8e-19 100.5 967 23.0
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 8.7e-18 97.1 533 25.3
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 8.7e-18 97.1 1003 24.7
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 8.7e-18 97.1 561 26.6
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 1.9e-17 95.9 1004 23.9
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 1.9e-17 95.9 1007 23.9
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 1.9e-17 95.9 1005 22.7
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 4.3e-17 94.7 461 27.8
AUR62028098 Chenopodium quinoa HOM05D006657 ORTHO05D005964 5.6e-17 94.4 560 24.5
Cc00_g14340 Coffea canephora HOM05D006657 ORTHO05D005964 1.3e-16 93.2 168 37.5
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 2.1e-16 92.4 442 24.0
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 2.1e-16 92.4 442 24.0
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 2.1e-16 92.4 507 23.9
ECA233G2144 Erigeron canadensis HOM05D006657 ORTHO05D005964 3.6e-16 91.7 505 24.4
CiPaw.06G040100 Carya illinoinensis HOM05D006657 ORTHO05D005964 6.2e-16 90.9 270 31.1
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 1.1e-15 90.1 298 29.5
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 1.2e-14 86.7 975 23.5
Hund23980 Selenicereus undatus HOM05D006657 ORTHO05D005964 1.2e-14 86.7 466 24.9
TWI23G1261 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 1.2e-14 86.7 1023 23.2
THA.LOC104799674 Tarenaya hassleriana HOM05D009821 ORTHO05D005964 1.5e-14 86.3 298 27.5
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 3.4e-14 85.1 979 25.4
Prupe.5G135100 Prunus persica HOM05D013249 ORTHO05D011012 3.4e-14 85.1 782 23.4
Eucgr.A00967 Eucalyptus grandis HOM05D006657 ORTHO05D005964 5.8e-14 84.3 202 34.7
Ah.07g204540 Amaranthus hybridus HOM05D006657 ORTHO05D005964 7.6e-14 84.0 503 25.4
Ah.13g070870 Amaranthus hybridus HOM05D006657 ORTHO05D005964 9.9e-14 83.6 412 24.5
unitig_0.g2439 Utricularia gibba HOM05D006657 ORTHO05D005964 9.9e-14 83.6 418 23.9
Gohir.A08G105800 Gossypium hirsutum HOM05D006657 ORTHO05D005964 1.3e-13 83.2 436 26.6
AUR62005972 Chenopodium quinoa HOM05D006657 ORTHO05D005964 2.2e-13 82.4 505 25.3
DCAR_020382 Daucus carota HOM05D006657 ORTHO05D005964 3.8e-13 81.6 1034 22.1
ATR0579G071 Amborella trichopoda HOM05D006657 ORTHO05D005964 6.4e-13 80.9 1009 21.5
Cpa.g.sc9.388 Carica papaya HOM05D006657 ORTHO05D005964 8.4e-13 80.5 96 50.0
TPR.G33400 Trifolium pratense HOM05D006657 ORTHO05D005964 4.2e-12 78.2 460 23.3
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 7.1e-12 77.4 1069 22.4
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 7.1e-12 77.4 214 29.0
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 1.6e-11 76.3 853 23.9
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 4.6e-11 74.7 1018 21.4
A01p24720 Brassica napus HOM05D009821 ORTHO05D005964 2.3e-10 72.4 441 24.9
BraA01t02384Z Brassica rapa HOM05D009821 ORTHO05D005964 2.3e-10 72.4 441 24.9
AL5G29280 Arabidopsis lyrata HOM05D009821 ORTHO05D005964 5.1e-10 71.2 196 32.7
EL10Ac3g05155 Beta vulgaris HOM05D006657 ORTHO05D005964 8.7e-10 70.5 437 25.4
TAR374G0061 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.1e-09 70.1 107 39.3
AT3G49490 Arabidopsis thaliana HOM05D009821 ORTHO05D005964 3.3e-09 68.6 372 26.9
BcaB02g09591 Brassica carinata HOM05D009821 ORTHO05D005964 4.3e-09 68.2 195 30.8
A06p18270 Brassica napus HOM05D009821 ORTHO05D005964 4.3e-09 68.2 210 31.4
BraA06t24910Z Brassica rapa HOM05D009821 ORTHO05D005964 4.3e-09 68.2 210 31.4
Aa31LG11G3790 Aethionema arabicum HOM05D009821 ORTHO05D005964 7.3e-09 67.4 199 32.7
BcaC01g02410 Brassica carinata HOM05D009821 ORTHO05D005964 9.6e-09 67.0 204 29.4
C03p65560 Brassica napus HOM05D009821 ORTHO05D005964 9.6e-09 67.0 204 29.4
BolC3t18811H Brassica oleracea HOM05D009821 ORTHO05D005964 9.6e-09 67.0 204 29.4
CDE04G2546 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 9.6e-09 67.0 815 23.1
BcaB05g23119 Brassica carinata HOM05D009821 ORTHO05D005964 1.3e-08 66.6 192 30.7
BolC1t03016H Brassica oleracea HOM05D009821 ORTHO05D005964 2.1e-08 65.9 256 30.5
BolC8t50069H Brassica oleracea HOM05D009821 ORTHO05D005964 2.1e-08 65.9 209 30.1
BcaC07g39413 Brassica carinata HOM05D009821 ORTHO05D005964 3.6e-08 65.1 209 30.1
A06p28240 Brassica napus HOM05D009821 ORTHO05D005964 3.6e-08 65.1 233 29.6
BraA06t25767Z Brassica rapa HOM05D009821 ORTHO05D005964 3.6e-08 65.1 233 29.6
Carub.0005s1582 Capsella rubella HOM05D009821 ORTHO05D005964 4.8e-08 64.7 196 30.1
C08p24510 Brassica napus HOM05D009821 ORTHO05D005964 6.2e-08 64.3 209 29.7
CDE02G0079 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 6.2e-08 64.3 445 23.4
QL02p027097 Quercus lobata HOM05D013249 ORTHO05D011012 6.2e-08 64.3 422 25.6
MD06G1124500 Malus domestica HOM05D013249 ORTHO05D011012 1.4e-07 63.2 348 25.3
BcaB01g00702 Brassica carinata HOM05D009821 ORTHO05D005964 1.8e-07 62.8 201 31.3
Cpa.g.sc3.164 Carica papaya HOM05D006657 ORTHO05D005964 1.8e-07 62.8 868 21.8
BcaC09g49952 Brassica carinata HOM05D009821 ORTHO05D005964 3.1e-07 62.0 517 23.8
CARHR158490 Cardamine hirsuta HOM05D009821 ORTHO05D005964 3.1e-07 62.0 206 29.6
Sp5g12600 Schrenkiella parvula HOM05D009821 ORTHO05D005964 3.1e-07 62.0 196 31.1
C01p30840 Brassica napus HOM05D009821 ORTHO05D005964 5.3e-07 61.2 514 23.5


User provided reference genes

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