Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 4.0e-160 568.2 314 100.0
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 1.6e-36 157.5 358 37.4
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 6.3e-36 155.6 330 39.1
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 6.3e-36 155.6 325 40.3
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.4e-35 154.5 255 45.5
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 3.4e-34 149.8 332 41.3
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 1.0e-33 148.3 347 36.6
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 1.0e-33 148.3 254 43.3
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 2.9e-33 146.7 333 37.2
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 2.9e-33 146.7 333 37.2
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 3.6e-31 139.8 346 34.4
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 8.2e-28 128.6 306 35.3
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 1.8e-27 127.5 337 33.2
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 2.9e-25 120.2 341 33.7
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 5.0e-25 119.4 236 38.1
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 1.4e-24 117.9 262 34.0
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 2.5e-24 117.1 233 39.5
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.2e-24 116.7 257 33.5
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 3.6e-23 113.2 342 33.6
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 3.6e-23 113.2 242 38.4
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.4e-22 111.3 253 32.4
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 1.8e-22 110.9 224 39.3
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 1.8e-22 110.9 337 33.2
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.9e-22 109.8 207 36.7
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 8.8e-22 108.6 248 34.3
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 8.8e-22 108.6 248 34.3
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 8.8e-22 108.6 248 34.3
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 1.1e-21 108.2 243 34.6
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 1.5e-21 107.8 320 29.4
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 3.3e-21 106.7 338 31.7
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 5.7e-21 105.9 324 34.3
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 9.7e-21 105.1 237 32.9
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 1.7e-20 104.4 257 35.4
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 1.7e-20 104.4 239 34.7
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 2.8e-20 103.6 314 32.8
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 8.2e-20 102.1 240 34.2
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 1.1e-19 101.7 252 35.3
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 1.8e-19 100.9 304 30.3
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 4.1e-19 99.8 213 39.0
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 4.1e-19 99.8 227 36.1
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 6.9e-19 99.0 232 35.8
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 6.9e-19 99.0 245 33.9
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 9.1e-19 98.6 248 32.3
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 1.2e-18 98.2 234 36.3
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 1.2e-18 98.2 233 37.3
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 1.2e-18 98.2 243 33.7
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 1.5e-18 97.8 217 40.1
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 2.0e-18 97.4 234 35.0
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 2.0e-18 97.4 253 33.2
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 5.9e-18 95.9 342 28.7
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 5.9e-18 95.9 227 36.6
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.3e-17 94.7 220 33.6
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 1.7e-17 94.4 219 35.2
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 5.0e-17 92.8 219 34.7
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 6.5e-17 92.4 212 35.4
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 8.5e-17 92.0 232 35.8
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 8.5e-17 92.0 219 34.7
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 8.5e-17 92.0 251 32.7
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 1.1e-16 91.7 219 34.7
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 1.4e-16 91.3 220 35.0
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 1.9e-16 90.9 242 35.1
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 1.9e-16 90.9 209 34.4
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 1.9e-16 90.9 210 41.0
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 2.5e-16 90.5 245 29.8
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 3.2e-16 90.1 228 35.5
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 4.2e-16 89.7 215 34.0
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 7.2e-16 89.0 206 32.0
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 1.2e-15 88.2 216 35.6
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 1.2e-15 88.2 214 35.0
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 1.6e-15 87.8 238 34.0
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 2.7e-15 87.0 238 34.9
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 3.6e-15 86.7 219 34.7
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 3.6e-15 86.7 216 35.6
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 4.7e-15 86.3 221 34.8
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 7.9e-15 85.5 230 32.6
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 7.9e-15 85.5 214 34.1
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 1.4e-14 84.7 213 35.2
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 1.4e-14 84.7 232 32.3
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 1.4e-14 84.7 217 31.8
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 2.3e-14 84.0 218 32.6
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 3.9e-14 83.2 217 33.2
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 5.2e-14 82.8 241 33.6
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 6.7e-14 82.4 347 31.1
Sc13g0010260 Simmondsia chinensis HOM05D003457 ORTHO05D009249 6.7e-14 82.4 214 35.0
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 1.1e-13 81.6 215 31.2
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 3.3e-13 80.1 203 34.5
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 4.4e-13 79.7 157 42.0
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 5.7e-13 79.3 314 28.7
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 1.3e-12 78.2 212 35.4
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 1.3e-12 78.2 329 30.4
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 1.3e-12 78.2 210 32.4
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 3.7e-12 76.6 210 34.3
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 4.8e-12 76.3 210 34.3
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 1.1e-11 75.1 211 34.1
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 1.1e-11 75.1 220 31.8
Lalb_Chr08g0239631 Lupinus albus HOM05D003457 ORTHO05D009249 1.1e-11 75.1 209 33.5
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 1.4e-11 74.7 179 33.5
SEGI_37736 Sequoiadendron giganteum HOM05D013917 ORTHO05D013169 5.3e-11 72.8 250 29.6
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 9.1e-11 72.0 211 34.1
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 1.2e-10 71.6 251 33.5
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 1.7e-09 67.8 243 32.1
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 2.9e-09 67.0 328 24.7
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 2.9e-09 67.0 261 33.3
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 5.0e-09 66.2 263 30.8
Lsat_1_v5_gn_7_39641 Lactuca sativa HOM05D003457 ORTHO05D009249 1.1e-08 65.1 181 30.9
PSO063G5804 Papaver somniferum HOM05D003457 ORTHO05D009249 5.5e-08 62.8 209 32.1
Lsat_1_v5_gn_5_150000 Lactuca sativa HOM05D003457 ORTHO05D009249 1.0e-06 58.5 175 30.3


User provided reference genes

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