Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 4.7e-169 597.8 309 100.0
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 1.8e-112 409.8 288 71.5
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 1.9e-109 399.8 308 67.5
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 1.5e-106 390.2 297 69.0
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 5.6e-106 388.3 302 66.6
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 7.4e-106 387.9 293 67.2
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 9.6e-106 387.5 296 66.9
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 1.3e-105 387.1 302 66.6
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 2.1e-105 386.3 303 66.3
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.7e-105 385.6 284 69.4
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 3.7e-105 385.6 310 65.5
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 3.7e-105 385.6 304 66.1
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 4.8e-105 385.2 303 66.7
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 4.8e-105 385.2 297 66.0
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 1.1e-104 384.0 286 70.6
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 1.8e-104 383.3 295 68.1
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 2.4e-104 382.9 298 68.5
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 2.4e-104 382.9 316 64.6
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 3.1e-104 382.5 306 66.0
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 3.1e-104 382.5 298 65.1
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 5.3e-104 381.7 296 66.9
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 6.9e-104 381.3 294 68.0
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 6.9e-104 381.3 287 66.6
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 9.0e-104 380.9 309 66.0
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 2.0e-103 379.8 300 66.0
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 2.6e-103 379.4 293 65.9
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 2.6e-103 379.4 304 68.8
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.6e-103 379.4 285 65.6
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 3.4e-103 379.0 304 66.1
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 4.5e-103 378.6 296 66.6
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 2.2e-102 376.3 297 69.0
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 2.9e-102 375.9 300 65.0
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 6.5e-102 374.8 293 64.5
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 1.4e-101 373.6 287 64.8
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 1.9e-101 373.2 297 63.3
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 4.2e-101 372.1 293 64.2
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 4.2e-101 372.1 304 63.2
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 5.5e-101 371.7 275 68.0
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 9.3e-101 370.9 287 65.2
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 1.2e-100 370.5 298 63.1
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 3.5e-100 369.0 300 62.3
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 1.0e-99 367.5 298 63.1
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 1.3e-99 367.1 294 65.6
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 1.8e-99 366.7 307 62.9
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 2.3e-99 366.3 300 63.7
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 3.9e-99 365.5 293 65.2
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 6.7e-99 364.8 358 55.3
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 8.7e-99 364.4 297 61.6
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 1.5e-98 363.6 307 62.2
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.5e-98 363.6 294 65.0
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 5.7e-98 361.7 293 66.2
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 9.6e-98 360.9 303 62.4
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 2.1e-97 359.8 302 64.6
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 2.8e-97 359.4 298 62.4
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 3.7e-97 359.0 299 63.5
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 4.8e-97 358.6 295 63.7
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 4.8e-97 358.6 315 59.7
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 8.2e-97 357.8 283 65.7
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 2.4e-96 356.3 268 67.5
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 2.4e-96 356.3 299 61.9
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 3.1e-96 355.9 306 63.4
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 4.1e-96 355.5 293 64.2
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 1.2e-95 354.0 313 62.9
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 5.8e-95 351.7 293 62.8
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 1.7e-94 350.1 298 60.4
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 2.2e-94 349.7 295 61.4
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 2.2e-94 349.7 284 65.8
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 2.9e-94 349.4 291 63.2
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.9e-94 349.4 312 59.9
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 1.4e-93 347.1 295 62.0
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 2.5e-93 346.3 294 61.2
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 3.2e-93 345.9 291 63.2
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 3.2e-93 345.9 293 61.8
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.2e-92 344.0 312 59.6
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 2.7e-92 342.8 328 58.5
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 3.5e-92 342.4 301 62.1
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 2.3e-91 339.7 300 60.3
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 2.3e-91 339.7 294 62.6
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 3.0e-91 339.3 277 62.5
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 1.1e-90 337.4 299 61.5
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 1.1e-90 337.4 291 60.8
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 3.3e-90 335.9 292 61.0
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 3.1e-88 329.3 319 56.7
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 4.1e-88 328.9 285 59.3
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 4.1e-88 328.9 284 61.3
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 2.6e-87 326.2 306 61.1
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 3.8e-86 322.4 303 56.1
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 7.2e-85 318.2 321 56.4
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.6e-84 317.0 297 58.9
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 3.3e-82 309.3 304 56.9
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.2e-79 300.8 292 56.8
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 5.0e-78 295.4 281 54.4
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.4e-77 293.9 241 66.4
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 1.9e-77 293.5 296 55.7
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 2.1e-76 290.0 296 57.1
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 2.7e-76 289.7 223 63.2
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 6.1e-76 288.5 292 53.1
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 1.4e-72 277.3 209 63.6
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.9e-70 269.6 182 73.1
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 3.0e-67 259.6 193 66.8
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 2.7e-60 236.5 201 59.2
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 1.1e-56 224.6 301 44.9
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 7.0e-56 221.9 141 73.0
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 2.7e-55 219.9 294 43.5
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 1.1e-53 214.5 207 56.0
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 3.2e-53 213.0 188 60.6
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 2.7e-52 209.9 191 62.8
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 1.4e-48 197.6 169 65.1
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 3.1e-48 196.4 267 41.2
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 5.4e-48 195.7 309 36.6
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 3.6e-44 183.0 274 36.1
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.4e-43 181.0 162 59.3
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 4.0e-43 179.5 166 61.4
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 5.2e-43 179.1 124 71.8
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 3.4e-42 176.4 237 46.8
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 4.4e-42 176.0 308 39.0
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 4.3e-37 159.5 145 62.8
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 4.0e-35 152.9 104 72.1
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.5e-34 151.0 143 64.3
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 1.0e-30 138.3 134 53.7
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 3.0e-30 136.7 104 66.3
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 3.7e-25 119.8 85 67.1
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 3.7e-25 119.8 95 58.9
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.2e-23 114.8 107 59.8
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 6.2e-20 102.4 119 52.9
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 1.4e-19 101.3 259 34.4
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 2.6e-18 97.1 119 56.3
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 5.8e-18 95.9 77 64.9
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 3.8e-17 93.2 108 51.9
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 7.1e-16 89.0 233 30.9
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 1.2e-12 78.2 98 48.0
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 2.2e-09 67.4 96 45.8


User provided reference genes

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