Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 0.0e+00 1154.0 603 100.0
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 3.8e-98 363.2 532 41.9
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 2.1e-96 357.5 557 42.2
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 2.7e-96 357.1 540 42.4
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 4.3e-94 349.7 505 42.8
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 3.1e-92 343.6 537 42.1
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 4.1e-92 343.2 548 40.0
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 1.1e-89 335.1 537 41.7
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 2.7e-88 330.5 509 42.0
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 8.8e-87 325.5 613 38.2
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 2.5e-86 323.9 504 41.9
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 3.4e-83 313.5 538 40.5
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 4.2e-81 306.6 394 45.2
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 8.2e-77 292.4 465 41.1
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 4.5e-75 286.6 520 39.8
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 5.0e-74 283.1 556 36.0
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 4.4e-70 270.0 397 41.8
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 1.7e-69 268.1 392 42.1
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 1.4e-68 265.0 542 35.8
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 3.5e-67 260.4 417 41.2
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 2.5e-65 254.2 521 36.5
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 9.4e-65 252.3 532 35.5
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 2.1e-64 251.1 413 40.4
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 5.2e-63 246.5 413 40.2
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 9.8e-62 242.3 391 42.7
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 4.8e-61 240.0 413 36.3
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 4.1e-60 236.9 386 40.7
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 7.0e-60 236.1 423 36.9
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 2.7e-59 234.2 426 37.6
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.9e-59 233.0 381 37.5
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 1.7e-58 231.5 405 39.5
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.2e-58 231.1 334 42.5
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.0e-58 229.9 384 38.0
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 6.5e-58 229.6 382 40.3
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 8.5e-58 229.2 404 36.9
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 3.2e-57 227.3 392 40.3
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 4.2e-57 226.9 432 37.0
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 1.2e-56 225.3 388 38.4
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 1.6e-56 224.9 519 33.3
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 2.1e-56 224.6 405 36.5
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.7e-56 224.2 384 37.5
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 1.4e-55 221.9 433 36.7
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 2.3e-55 221.1 400 37.2
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 2.3e-55 221.1 405 36.5
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 3.0e-55 220.7 375 40.0
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 5.7e-54 216.5 470 36.0
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 7.5e-54 216.1 396 36.1
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 9.8e-54 215.7 303 43.9
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 1.7e-53 214.9 376 37.5
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 2.2e-53 214.5 394 38.3
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 2.0e-51 208.0 400 35.5
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 2.9e-50 204.1 258 46.5
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 1.1e-49 202.2 454 31.7
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 6.1e-48 196.4 255 45.1
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 2.3e-47 194.5 275 42.9
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 6.8e-47 193.0 411 36.3
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 2.0e-46 191.4 330 39.7
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 5.7e-46 189.9 376 36.2
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 9.8e-46 189.1 255 42.7
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 1.1e-44 185.7 266 43.6
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 2.4e-44 184.5 352 38.1
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.1e-44 183.7 331 37.5
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 7.0e-44 183.0 273 44.3
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 6.6e-42 176.4 355 34.1
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.5e-41 175.3 251 41.4
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 1.0e-39 169.1 402 31.3
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 1.5e-38 165.2 419 31.5
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 5.8e-38 163.3 289 40.5
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 8.3e-37 159.5 251 42.6
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.7e-35 154.5 262 37.0
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.6e-32 145.2 419 29.8
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 1.2e-30 139.0 237 37.6
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 2.0e-30 138.3 192 39.1
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 9.8e-30 136.0 376 30.6
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 7.1e-28 129.8 267 33.0
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 3.5e-27 127.5 199 39.2
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 6.0e-27 126.7 248 33.9
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.3e-26 124.8 183 40.4
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 2.8e-24 117.9 123 49.6
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 1.8e-23 115.2 237 32.5
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 2.6e-22 111.3 129 46.5
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.4e-22 110.5 105 54.3
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 7.6e-22 109.8 157 40.1
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 1.7e-21 108.6 252 31.3
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 2.2e-21 108.2 229 33.2
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 2.9e-21 107.8 160 40.0
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 1.2e-19 102.4 72 68.1
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-19 101.7 94 56.4
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.0e-18 99.4 82 59.8
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.0e-18 99.4 82 59.8
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 2.3e-18 98.2 98 57.1
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.9e-18 97.4 82 58.5
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 8.6e-18 96.3 99 51.5
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 1.1e-17 95.9 75 60.0
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 1.1e-17 95.9 86 54.7
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 1.5e-17 95.5 103 51.5
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 1.5e-17 95.5 90 47.8
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 9.6e-17 92.8 87 52.9
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 9.6e-17 92.8 214 34.6
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.6e-17 92.8 161 39.8
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-16 91.7 159 39.6
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 2.1e-16 91.7 164 39.6
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 2.8e-16 91.3 91 51.6
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 4.7e-16 90.5 89 51.7
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-15 89.4 142 38.0
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 1.4e-15 89.0 89 51.7
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-15 89.0 161 39.1
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 2.4e-15 88.2 186 34.9
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 2.4e-15 88.2 89 52.8
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 3.1e-15 87.8 91 50.5
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 8.9e-15 86.3 72 58.3
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 2.6e-14 84.7 86 50.0
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.9e-13 81.3 82 51.2
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 4.6e-11 73.9 220 29.5
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.3e-10 71.6 91 42.9
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.1e-10 70.5 71 53.5
FAN18G0036 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.8e-07 62.0 37 70.3


User provided reference genes

Program Settings