Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 2.1e-117 425.6 206 100.0
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 2.3e-87 325.9 195 79.0
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.4e-84 316.6 206 74.3
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 1.4e-84 316.6 198 76.3
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 2.4e-84 315.8 202 76.2
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.4e-84 315.8 202 76.2
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 9.0e-84 313.9 200 76.0
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 1.0e-82 310.5 202 74.3
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 8.4e-82 307.4 195 73.3
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 2.5e-81 305.8 197 73.1
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 2.5e-81 305.8 202 72.8
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 2.5e-81 305.8 199 74.4
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 3.2e-81 305.4 197 72.1
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 4.6e-80 301.6 220 69.5
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 7.9e-80 300.8 196 71.4
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.8e-79 299.7 192 75.0
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.8e-79 299.7 192 75.0
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 8.7e-79 297.4 200 69.5
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 1.1e-78 297.0 202 70.3
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.1e-78 297.0 202 69.3
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 1.5e-78 296.6 200 71.0
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 3.3e-78 295.4 200 69.5
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 1.6e-77 293.1 198 71.7
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 2.1e-77 292.7 196 68.4
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 4.8e-77 291.6 200 70.5
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 6.3e-77 291.2 200 70.5
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 6.3e-77 291.2 196 71.4
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 6.3e-77 291.2 197 71.1
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 6.3e-77 291.2 206 67.5
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 4.1e-76 288.5 196 70.9
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 4.1e-76 288.5 196 70.9
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 4.1e-76 288.5 196 71.9
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 5.3e-76 288.1 196 69.4
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 6.9e-76 287.7 201 68.2
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 9.0e-76 287.3 197 70.6
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 1.2e-75 287.0 197 69.5
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 1.5e-75 286.6 202 67.3
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 2.0e-75 286.2 198 68.2
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 2.6e-75 285.8 196 69.9
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 2.6e-75 285.8 196 69.4
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 4.5e-75 285.0 200 67.5
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 4.5e-75 285.0 198 66.7
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 7.6e-75 284.3 197 70.6
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 1.3e-74 283.5 194 69.1
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 1.7e-74 283.1 201 66.7
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 2.2e-74 282.7 200 67.5
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 2.2e-74 282.7 194 67.5
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 3.8e-74 282.0 201 66.7
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 1.1e-73 280.4 198 67.2
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 1.1e-73 280.4 191 69.1
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 1.4e-73 280.0 193 69.4
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 1.9e-73 279.6 193 69.4
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 3.2e-73 278.9 202 66.8
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 5.5e-73 278.1 170 78.8
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 7.2e-73 277.7 197 68.0
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 2.7e-72 275.8 195 67.7
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 4.6e-72 275.0 200 65.5
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 7.9e-72 274.2 200 65.5
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 7.9e-72 274.2 200 65.5
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 7.9e-72 274.2 200 65.5
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 1.3e-71 273.5 193 66.3
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 3.0e-71 272.3 198 64.6
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 3.9e-71 271.9 196 66.3
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 5.1e-71 271.6 180 71.7
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 5.1e-71 271.6 180 71.7
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 8.7e-71 270.8 193 67.4
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 8.7e-71 270.8 193 66.3
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 1.5e-70 270.0 200 67.5
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 5.7e-70 268.1 192 68.8
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 9.7e-70 267.3 194 64.9
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 3.7e-69 265.4 207 61.8
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 8.2e-69 264.2 201 62.7
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 1.1e-68 263.8 201 61.2
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 2.4e-68 262.7 197 64.5
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 6.9e-68 261.2 167 73.1
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.2e-67 260.4 167 74.3
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 3.8e-66 255.4 197 60.4
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 1.1e-65 253.8 195 59.5
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 1.9e-65 253.1 197 59.9
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 4.2e-65 251.9 170 67.6
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 7.2e-65 251.1 197 57.4
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 4.6e-64 248.4 157 74.5
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 4.6e-64 248.4 198 61.1
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 1.0e-63 247.3 162 73.5
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 1.4e-63 246.9 206 61.2
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 1.4e-63 246.9 197 61.9
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 1.8e-63 246.5 200 61.5
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 5.1e-63 245.0 186 63.4
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.5e-62 243.4 167 72.5
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 9.7e-62 240.7 197 60.9
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 1.3e-61 240.4 198 59.1
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 4.8e-61 238.4 168 66.1
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 2.0e-59 233.0 167 67.7
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 1.4e-57 226.9 221 52.5
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 8.2e-53 211.1 133 72.2
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 8.2e-53 211.1 133 72.2
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 1.4e-52 210.3 199 51.8
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 1.8e-52 209.9 196 50.5
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 9.1e-52 207.6 198 55.6
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 1.3e-50 203.8 198 47.5
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 3.2e-49 199.1 132 65.9
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 2.2e-45 186.4 196 44.9
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 1.4e-44 183.7 195 48.2
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 3.1e-44 182.6 173 52.0
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 1.3e-42 177.2 111 77.5
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.2e-37 159.8 92 78.3
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 1.1e-33 147.5 154 46.8
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 8.0e-32 141.4 227 37.0
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 1.8e-31 140.2 82 80.5
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 8.3e-29 131.3 92 62.0
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 9.2e-28 127.9 111 55.0
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 4.4e-22 109.0 186 33.9
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 1.7e-21 107.1 70 67.1
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 3.7e-21 105.9 72 70.8
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 4.7e-16 89.0 227 30.8
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 1.5e-14 84.0 136 35.3
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 5.8e-14 82.0 68 54.4
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 1.7e-13 80.5 53 69.8
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 5.4e-12 75.5 57 57.9
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 6.0e-11 72.0 60 60.0
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 1.3e-10 70.9 47 70.2


User provided reference genes

Program Settings