Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 0.0e+00 1218.8 634 100.0
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.7e-219 765.8 645 64.7
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 1.9e-217 759.6 655 62.0
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 1.4e-215 753.4 656 61.7
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 1.3e-205 720.3 652 60.7
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 6.4e-205 718.0 645 60.2
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 5.4e-204 714.9 651 60.7
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.3e-202 709.5 645 59.8
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 5.1e-202 708.4 651 59.6
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 1.5e-201 706.8 647 61.4
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 1.9e-201 706.4 650 59.2
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 1.9e-201 706.4 655 59.4
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 9.5e-201 704.1 651 58.5
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 3.6e-200 702.2 652 59.2
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 1.1e-199 700.7 653 59.6
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 1.8e-199 699.9 651 58.7
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 5.2e-199 698.4 661 57.5
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 6.8e-199 698.0 653 59.3
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.2e-198 697.2 654 58.1
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 5.8e-198 694.9 654 59.3
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.7e-197 693.3 671 57.5
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.9e-197 692.6 652 58.0
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 4.9e-197 691.8 684 57.0
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.1e-196 690.6 671 57.7
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 1.1e-196 690.6 656 57.9
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 1.9e-196 689.9 654 58.7
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 3.2e-196 689.1 652 58.7
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 4.1e-196 688.7 653 59.0
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 1.6e-195 686.8 652 58.3
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.7e-194 683.3 652 57.7
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 5.1e-194 681.8 662 58.0
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 6.6e-194 681.4 669 56.4
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 1.1e-193 680.6 643 58.2
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 1.9e-193 679.9 662 58.0
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.2e-192 677.2 646 57.4
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 2.1e-192 676.4 652 57.4
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.8e-192 676.0 657 57.2
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.8e-192 676.0 657 57.2
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 2.8e-192 676.0 655 58.6
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 3.6e-192 675.6 652 56.6
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 1.1e-191 674.1 664 56.0
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.8e-191 673.3 650 57.5
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 2.4e-191 672.9 651 57.9
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 2.4e-191 672.9 667 55.0
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 8.9e-191 671.0 651 57.5
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.2e-190 670.6 653 57.0
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 4.4e-190 668.7 653 57.9
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 5.8e-190 668.3 650 56.8
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 5.8e-190 668.3 667 55.2
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 1.7e-189 666.8 650 57.1
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 1.7e-189 666.8 647 56.1
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 2.9e-189 666.0 667 55.0
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 8.4e-189 664.5 673 55.4
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 5.4e-188 661.8 675 55.1
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 3.5e-187 659.1 659 54.3
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 3.5e-187 659.1 675 56.1
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 4.6e-187 658.7 675 54.7
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 7.8e-187 657.9 653 55.9
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 1.0e-186 657.5 678 54.1
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 1.7e-186 656.8 655 55.1
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 5.1e-186 655.2 677 55.2
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 1.8e-183 646.7 672 54.6
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 1.2e-182 644.0 656 55.2
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 1.3e-181 640.6 674 54.0
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 8.4e-181 637.9 658 54.1
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.1e-180 637.5 651 54.7
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 1.9e-180 636.7 644 55.9
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 4.2e-180 635.6 622 56.8
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 1.6e-179 633.6 638 55.3
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 2.7e-179 632.9 668 53.6
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 2.7e-179 632.9 647 54.6
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 3.0e-178 629.4 669 53.5
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 1.3e-176 624.0 658 54.4
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 2.4e-175 619.8 671 53.2
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 3.1e-175 619.4 656 54.7
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 1.2e-174 617.5 652 52.5
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 3.8e-173 612.5 655 53.6
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 5.4e-172 608.6 629 54.2
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 1.0e-170 604.4 652 52.9
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 1.3e-170 604.0 632 53.2
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 2.3e-170 603.2 647 53.2
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 2.3e-170 603.2 601 56.6
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 2.3e-170 603.2 660 52.7
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 4.3e-169 599.0 643 53.3
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 3.7e-168 595.9 577 57.2
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 7.1e-164 581.6 678 50.4
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.8e-162 577.0 677 50.1
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 2.3e-162 576.6 675 48.9
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 7.4e-161 571.6 678 50.1
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 7.4e-161 571.6 676 49.3
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 2.1e-160 570.1 676 49.1
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 2.4e-159 566.6 678 49.7
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 2.4e-159 566.6 682 47.9
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 9.0e-159 564.7 683 48.8
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.9e-157 559.7 662 50.2
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 2.9e-157 559.7 661 49.6
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 8.4e-157 558.1 674 47.0
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 9.7e-153 544.7 472 58.9
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 5.5e-148 528.9 614 50.3
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.5e-134 483.0 686 43.6
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 1.1e-129 468.0 680 42.5
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 5.5e-124 449.1 692 40.8
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 8.8e-122 441.8 625 43.4
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 3.7e-120 436.4 646 40.2
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 6.1e-115 419.1 559 44.4
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 1.6e-110 404.4 649 42.1
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.1e-108 398.3 335 61.2
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 5.4e-103 379.4 305 65.2
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 4.3e-100 369.8 344 55.5
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 2.8e-91 340.5 321 56.7
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 3.1e-90 337.0 356 54.8
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 2.7e-78 297.4 595 32.6
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 1.3e-64 251.9 244 57.8
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 1.3e-51 208.8 237 53.2
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 2.8e-43 181.0 320 38.4
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 6.3e-43 179.9 224 46.9
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 1.0e-40 172.6 258 42.2
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 5.9e-25 120.2 352 28.7
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 3.8e-16 90.9 90 56.7
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.9e-15 88.6 177 34.5
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 1.1e-12 79.3 222 27.9
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 5.0e-08 63.9 107 41.1


User provided reference genes

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