Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 2.6e-130 468.8 240 100.0
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 2.0e-66 256.5 239 62.8
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.1e-64 248.8 246 57.3
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 3.9e-62 242.3 250 56.4
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 3.9e-62 242.3 247 55.9
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 3.9e-62 242.3 249 53.4
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 8.6e-62 241.1 253 54.5
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 1.5e-61 240.4 250 56.0
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 1.9e-61 240.0 247 55.5
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 4.3e-61 238.8 240 55.8
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 1.6e-60 236.9 254 53.9
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 8.1e-60 234.6 246 55.3
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 6.9e-59 231.5 248 54.0
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 6.9e-59 231.5 235 57.4
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 2.0e-58 229.9 255 52.5
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 2.6e-58 229.6 254 50.4
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 4.4e-58 228.8 235 57.4
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 2.9e-57 226.1 274 51.1
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 4.9e-57 225.3 244 53.3
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 6.4e-57 224.9 246 51.2
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 1.9e-56 223.4 243 51.4
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 7.1e-56 221.5 202 55.0
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 9.3e-56 221.1 242 50.8
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.2e-55 220.7 215 52.6
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 2.1e-55 219.9 226 57.1
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 2.7e-55 219.5 219 56.2
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 4.6e-55 218.8 253 51.0
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 1.0e-54 217.6 253 49.8
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.7e-54 216.9 255 50.2
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 1.7e-54 216.9 237 49.8
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.7e-54 216.9 249 49.0
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 2.3e-54 216.5 202 55.0
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 3.0e-54 216.1 247 50.6
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 3.9e-54 215.7 284 47.9
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 3.9e-54 215.7 243 49.8
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 6.6e-54 214.9 199 56.8
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 8.7e-54 214.5 217 51.6
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 1.1e-53 214.2 222 55.9
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 1.5e-53 213.8 244 49.6
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.5e-53 213.8 229 52.0
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.5e-53 213.8 247 49.8
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 5.6e-53 211.8 250 52.4
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 7.3e-53 211.5 241 51.0
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 7.3e-53 211.5 207 54.6
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 7.3e-53 211.5 191 55.5
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 2.1e-52 209.9 249 49.4
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 2.8e-52 209.5 255 50.6
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 4.8e-52 208.8 243 51.0
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 6.2e-52 208.4 230 53.0
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 6.2e-52 208.4 184 59.8
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 8.1e-52 208.0 201 53.7
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 1.4e-51 207.2 211 53.6
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 2.4e-51 206.5 208 52.9
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 3.1e-51 206.1 258 48.4
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 4.0e-51 205.7 248 49.2
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 4.0e-51 205.7 208 53.8
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 6.9e-51 204.9 250 47.6
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 9.0e-51 204.5 237 51.1
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.5e-50 203.8 220 51.8
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 2.0e-50 203.4 253 49.0
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 5.8e-50 201.8 248 48.0
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 5.8e-50 201.8 206 52.4
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 1.3e-49 200.7 205 51.7
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 3.2e-48 196.1 172 59.9
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 9.3e-48 194.5 249 47.8
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 2.1e-47 193.4 189 57.1
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 2.7e-47 193.0 187 55.6
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 2.7e-47 193.0 187 55.6
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 4.6e-47 192.2 234 47.0
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 6.0e-47 191.8 188 53.7
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 1.0e-46 191.0 216 49.5
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 2.3e-46 189.9 183 55.7
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 2.3e-46 189.9 249 45.8
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 2.3e-46 189.9 226 48.7
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 5.1e-46 188.7 236 44.9
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 5.1e-46 188.7 206 48.1
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 6.7e-46 188.3 162 58.0
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 8.7e-46 188.0 270 43.3
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 3.3e-45 186.0 150 60.7
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 3.3e-45 186.0 210 51.4
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 4.3e-45 185.7 203 53.2
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 4.3e-45 185.7 232 47.4
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 7.4e-45 184.9 170 56.5
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 9.6e-45 184.5 206 50.5
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 9.6e-45 184.5 168 57.1
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 1.6e-44 183.7 258 48.4
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 1.6e-44 183.7 177 55.9
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 1.6e-44 183.7 177 55.4
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 2.8e-44 183.0 191 53.4
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 2.8e-44 183.0 191 53.4
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 2.8e-44 183.0 209 49.8
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 2.8e-44 183.0 234 45.7
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 2.8e-44 183.0 183 51.9
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 3.7e-44 182.6 209 48.8
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 3.7e-44 182.6 193 50.8
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 3.7e-44 182.6 184 53.3
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 4.8e-44 182.2 193 50.8
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 3.1e-43 179.5 235 45.5
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 3.1e-43 179.5 220 47.3
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 6.9e-43 178.3 234 44.9
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 1.2e-42 177.6 240 46.7
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 1.2e-42 177.6 203 50.7
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 2.0e-42 176.8 229 46.7
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 4.5e-42 175.6 199 49.7
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 6.4e-41 171.8 249 45.8
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 3.5e-39 166.0 189 49.7
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 1.3e-36 157.5 146 51.4
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 1.4e-35 154.1 87 78.2
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 4.5e-34 149.1 135 51.1
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 8.4e-33 144.8 248 42.3
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 1.9e-32 143.7 127 61.4
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 9.3e-32 141.4 177 47.5
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 3.5e-31 139.4 132 50.0
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 1.8e-30 137.1 118 50.8
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 2.8e-28 129.8 106 58.5
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 6.9e-27 125.2 164 43.3
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.6e-26 123.2 254 37.8
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 3.4e-26 122.9 136 47.8
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.6e-23 114.0 88 62.5
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 2.1e-23 113.6 86 61.6
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 4.8e-20 102.4 245 36.3
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 2.1e-15 87.0 107 44.9
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 8.2e-12 75.1 91 47.3
PSO675G1839 Papaver somniferum HOM05D000047 ORTHO05D000044 5.2e-06 55.8 64 51.6


User provided reference genes

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