Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 3.7e-147 525.0 299 100.0
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 5.0e-91 338.6 300 64.7
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 4.6e-89 332.0 274 67.2
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 4.3e-87 325.5 271 64.9
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 1.7e-86 323.6 256 67.6
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 2.8e-86 322.8 300 62.7
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 6.3e-86 321.6 258 67.1
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 1.4e-85 320.5 258 67.1
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 3.1e-85 319.3 251 68.1
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 4.1e-85 318.9 258 67.1
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 1.2e-84 317.4 274 63.5
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 2.0e-84 316.6 271 63.5
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 2.0e-84 316.6 271 63.5
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 7.7e-84 314.7 272 65.4
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 2.2e-83 313.2 262 67.2
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 1.1e-82 310.8 186 98.4
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 2.5e-82 309.7 264 62.1
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 4.2e-82 308.9 240 69.6
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 7.2e-82 308.1 266 63.2
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 2.1e-81 306.6 274 62.8
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 2.1e-81 306.6 274 62.8
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 2.1e-81 306.6 271 62.7
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 6.1e-81 305.1 299 58.5
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 1.0e-80 304.3 272 64.0
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 2.3e-80 303.1 274 63.5
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 2.3e-80 303.1 302 57.0
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 3.0e-80 302.8 274 62.4
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 5.1e-80 302.0 261 64.4
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 5.1e-80 302.0 266 63.9
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 8.8e-80 301.2 269 62.1
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 2.0e-79 300.1 255 62.4
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 2.6e-79 299.7 265 62.6
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 5.7e-79 298.5 269 62.5
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 5.7e-79 298.5 253 63.2
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 9.7e-79 297.7 271 60.9
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 3.7e-78 295.8 268 61.6
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.4e-77 293.9 239 69.9
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 1.8e-77 293.5 269 61.3
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 2.4e-77 293.1 252 63.9
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.4e-77 293.1 256 63.7
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 5.3e-77 292.0 263 63.1
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 7.0e-77 291.6 244 66.0
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 2.6e-76 289.7 260 62.7
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 2.6e-76 289.7 309 55.3
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 1.3e-75 287.3 265 60.0
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 1.3e-75 287.3 307 54.1
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 1.7e-75 287.0 270 60.4
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 2.2e-75 286.6 272 60.3
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 2.9e-75 286.2 240 64.6
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 5.0e-75 285.4 269 59.1
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.4e-74 283.9 247 62.3
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 1.9e-74 283.5 275 58.5
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 2.5e-74 283.1 250 63.2
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.5e-74 283.1 272 60.7
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.2e-73 280.8 272 60.3
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 1.6e-73 280.4 272 60.7
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.6e-73 280.4 272 60.7
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 1.6e-73 280.4 246 62.6
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 2.1e-73 280.0 264 59.8
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 3.6e-73 279.3 241 64.3
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 8.0e-73 278.1 265 60.4
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 1.0e-72 277.7 275 56.7
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 1.4e-72 277.3 253 60.1
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.8e-72 276.9 270 58.9
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 1.8e-72 276.9 254 59.4
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 2.3e-72 276.6 255 60.4
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 3.9e-72 275.8 247 60.3
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 3.9e-72 275.8 254 59.8
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 6.7e-72 275.0 254 59.1
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 6.7e-72 275.0 254 59.1
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 6.7e-72 275.0 254 59.1
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 6.7e-72 275.0 263 59.3
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 8.8e-72 274.6 266 57.5
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 1.1e-71 274.2 253 60.1
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 1.1e-71 274.2 254 59.4
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 5.7e-71 271.9 262 60.7
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 7.4e-71 271.6 254 58.7
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 6.3e-70 268.5 257 58.8
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 2.4e-69 266.5 256 59.0
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 2.4e-69 266.5 274 56.2
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 7.0e-69 265.0 265 59.2
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 9.1e-69 264.6 259 57.1
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 2.6e-68 263.1 266 56.4
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 3.5e-68 262.7 258 58.1
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 3.5e-68 262.7 259 57.1
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 4.5e-68 262.3 272 57.0
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 2.2e-67 260.0 247 59.5
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 3.6e-65 252.7 298 51.7
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 1.4e-64 250.8 298 51.0
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 3.0e-64 249.6 232 63.4
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 1.5e-63 247.3 257 56.4
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 2.4e-61 240.0 266 53.4
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 1.2e-60 237.7 242 54.5
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 6.8e-56 221.9 263 52.5
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 8.8e-56 221.5 212 57.5
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.2e-54 216.9 253 52.2
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 1.2e-52 211.1 231 53.2
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 4.5e-52 209.1 255 50.2
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 2.3e-51 206.8 253 51.4
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 4.7e-49 199.1 177 62.1
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 3.0e-48 196.4 223 53.8
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 1.9e-42 177.2 178 55.6
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 2.9e-38 163.3 149 63.1
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 4.9e-38 162.5 220 44.5
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 8.3e-38 161.8 242 43.8
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 3.5e-36 156.4 221 44.8
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 2.8e-33 146.7 201 46.3
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 2.8e-33 146.7 225 43.6
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 4.0e-32 142.9 114 68.4
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 3.4e-31 139.8 264 39.0
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 8.1e-25 118.6 282 34.8
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 3.4e-23 113.2 266 34.6
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 1.2e-20 104.8 141 45.4
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 7.8e-20 102.1 223 35.9
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 1.9e-18 97.4 234 33.8
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 4.7e-17 92.8 142 45.1
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 7.6e-15 85.5 81 53.1
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 2.1e-12 77.4 269 33.5
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 5.6e-10 69.3 58 60.3
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 1.6e-09 67.8 129 37.2


User provided reference genes

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