Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 3.0e-156 555.1 263 100.0
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 7.9e-109 397.5 263 70.0
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.8e-108 396.4 263 70.0
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 8.7e-108 394.0 263 67.7
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 5.3e-105 384.8 263 68.8
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 1.5e-104 383.3 263 66.5
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 2.0e-104 382.9 263 67.7
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 2.6e-104 382.5 263 68.4
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 4.5e-104 381.7 263 68.8
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 4.5e-104 381.7 262 67.9
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 7.7e-104 380.9 264 68.6
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 2.2e-103 379.4 263 65.8
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 3.8e-103 378.6 265 67.2
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 3.8e-103 378.6 263 69.6
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 5.0e-103 378.3 261 67.4
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 5.0e-103 378.3 261 67.4
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 6.5e-103 377.9 263 66.2
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 8.5e-103 377.5 263 66.2
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 1.1e-102 377.1 263 67.7
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.9e-102 376.3 263 66.5
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.9e-102 376.3 263 67.3
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.5e-102 375.9 263 66.2
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 2.5e-102 375.9 262 65.6
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 2.5e-102 375.9 263 66.9
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 4.2e-102 375.2 265 66.8
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 5.5e-102 374.8 263 65.8
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 5.5e-102 374.8 263 65.8
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 1.6e-101 373.2 263 66.2
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 6.1e-101 371.3 263 66.9
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 6.1e-101 371.3 263 65.8
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 6.1e-101 371.3 262 65.3
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 7.9e-101 370.9 263 65.8
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.4e-100 370.2 263 66.5
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 2.3e-100 369.4 264 65.5
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 2.3e-100 369.4 263 65.8
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 3.0e-100 369.0 264 65.2
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 3.9e-100 368.6 263 64.3
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 1.5e-99 366.7 263 65.8
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 2.0e-99 366.3 263 65.0
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 9.7e-99 364.0 263 63.9
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 9.7e-99 364.0 263 65.4
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 1.1e-97 360.5 261 64.4
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 1.1e-97 360.5 263 63.9
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 5.3e-97 358.2 263 62.4
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 6.9e-97 357.8 252 64.7
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 1.2e-96 357.1 264 65.2
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 7.7e-96 354.4 264 61.7
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 2.2e-95 352.8 263 63.5
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 6.5e-95 351.3 263 62.7
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 1.9e-94 349.7 263 62.7
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.9e-94 349.7 263 62.0
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 2.5e-94 349.4 263 62.4
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 2.5e-94 349.4 262 63.0
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 3.2e-94 349.0 263 62.4
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 5.5e-94 348.2 263 61.6
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 5.5e-94 348.2 263 63.9
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 7.2e-94 347.8 263 63.1
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 9.4e-94 347.4 263 61.2
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 9.4e-94 347.4 263 62.0
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.1e-93 346.3 263 62.0
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 4.7e-93 345.1 263 62.0
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 1.0e-92 344.0 263 61.2
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 1.4e-92 343.6 263 60.5
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 3.9e-92 342.0 263 63.5
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 1.1e-91 340.5 272 60.3
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 2.0e-91 339.7 263 60.5
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 3.3e-91 339.0 268 63.1
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 5.7e-91 338.2 264 60.2
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 1.7e-90 336.7 263 62.0
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 1.7e-90 336.7 282 59.6
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.2e-90 336.3 263 59.3
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 4.8e-90 335.1 264 59.8
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 2.4e-89 332.8 262 61.5
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 9.1e-89 330.9 263 62.0
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 1.2e-88 330.5 241 64.7
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 6.5e-87 324.7 236 64.8
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 8.5e-87 324.3 263 59.7
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 3.2e-86 322.4 239 64.4
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 9.4e-86 320.9 236 63.6
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 2.1e-85 319.7 263 58.9
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 4.7e-85 318.5 266 57.1
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 2.3e-84 316.2 281 56.9
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 8.8e-84 314.3 235 60.9
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 1.2e-83 313.9 216 65.7
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 2.2e-82 309.7 262 57.3
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 3.2e-78 295.8 236 58.9
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 4.2e-78 295.4 213 64.8
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 5.2e-76 288.5 259 54.4
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 6.8e-76 288.1 269 51.7
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 5.7e-75 285.0 178 72.5
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 1.7e-71 273.5 190 66.8
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 2.5e-70 269.6 256 53.1
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 2.8e-69 266.2 263 52.5
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 2.8e-69 266.2 189 65.6
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 3.6e-69 265.8 263 49.4
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 1.0e-68 264.2 195 62.6
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 1.8e-68 263.5 236 54.2
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 5.2e-68 261.9 190 66.3
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 9.8e-67 257.7 236 53.4
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.3e-66 257.3 258 49.2
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 2.2e-66 256.5 299 47.5
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 2.1e-61 240.0 260 46.9
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 2.0e-59 233.4 246 49.2
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 1.7e-58 230.3 238 51.7
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 2.9e-58 229.6 238 50.8
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 3.5e-56 222.6 301 43.9
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 7.8e-56 221.5 190 58.4
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 4.0e-52 209.1 191 51.8
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 6.8e-52 208.4 207 53.6
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 1.2e-51 207.6 253 45.8
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 2.0e-51 206.8 269 42.0
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 1.1e-49 201.1 255 45.1
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 5.4e-49 198.7 192 51.0
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 6.0e-48 195.3 117 76.1
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 6.0e-48 195.3 261 40.6
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 2.3e-47 193.4 285 37.2
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 6.6e-47 191.8 304 35.9
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 7.5e-43 178.3 150 58.0
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 3.7e-42 176.0 137 62.0
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 5.4e-41 172.2 134 60.4
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 5.4e-41 172.2 119 67.2
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 1.2e-40 171.0 125 63.2
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 1.3e-39 167.5 245 41.6
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 1.1e-38 164.5 126 58.7
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 3.3e-38 162.9 119 61.3
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.7e-34 150.6 119 55.5
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 2.9e-34 149.8 212 39.2
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 6.4e-34 148.7 143 51.0
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 9.2e-33 144.8 164 47.6
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 1.6e-29 134.0 241 34.9
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 9.0e-28 128.3 106 56.6
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 3.1e-20 103.2 62 77.4
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 1.5e-19 100.9 81 56.8
SHI13292 Sapria himalayana HOM05D000590 ORTHO05D006825 1.2e-16 91.3 73 58.9
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 2.3e-15 87.0 101 44.6
unitig_747.g21341 Utricularia gibba HOM05D000590 ORTHO05D006825 2.3e-15 87.0 60 65.0
GSVIVG01027101001 Vitis vinifera HOM05D000590 ORTHO05D006825 7.4e-14 82.0 56 66.1
GSVIVG01027108001 Vitis vinifera HOM05D000590 ORTHO05D006825 9.6e-14 81.6 63 58.7
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 1.3e-13 81.3 63 63.5
VMungo0331G1881 Vigna mungo HOM05D000590 ORTHO05D006825 3.1e-12 76.6 64 53.1
PSO210G5020 Papaver somniferum HOM05D001459 ORTHO05D003498 1.2e-11 74.7 52 63.5
Lalb_Chr10g0100501 Lupinus albus HOM05D000590 ORTHO05D006825 4.5e-11 72.8 61 55.7
Sabra02G0141900 Salix brachista HOM05D000590 ORTHO05D006825 9.3e-09 65.1 73 46.6
MD07G1149100 Malus domestica HOM05D000590 ORTHO05D006825 1.2e-08 64.7 44 63.6
BcaC02g10248 Brassica carinata HOM05D000590 ORTHO05D006825 2.5e-06 57.0 40 52.5


User provided reference genes

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