Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 1.4e-54 216.1 109 100.0
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.2e-23 113.2 106 58.5
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 7.5e-21 104.0 112 51.8
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 2.2e-20 102.4 110 56.4
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.7e-20 101.7 107 54.2
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 4.9e-20 101.3 114 49.1
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 2.4e-19 99.0 110 54.5
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 5.4e-19 97.8 105 51.4
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 9.2e-19 97.1 106 51.9
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 9.2e-19 97.1 111 50.5
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 1.2e-18 96.7 110 53.6
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 1.2e-18 96.7 109 52.3
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.6e-18 96.3 105 51.4
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 2.0e-18 95.9 106 50.9
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 2.0e-18 95.9 107 53.3
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.5e-18 95.1 105 54.3
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 7.8e-18 94.0 111 53.2
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 1.3e-17 93.2 111 50.5
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.7e-17 92.8 111 50.5
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 2.9e-17 92.0 119 47.9
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 4.3e-16 88.2 106 48.1
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 7.3e-16 87.4 114 46.5
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 9.5e-16 87.0 107 49.5
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 9.5e-16 87.0 90 54.4
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 9.5e-16 87.0 111 46.8
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 1.6e-15 86.3 109 45.0
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 2.1e-15 85.9 105 51.4
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 2.8e-15 85.5 108 48.1
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 2.8e-15 85.5 107 45.8
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 1.0e-14 83.6 114 49.1
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 1.0e-14 83.6 110 48.2
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 1.4e-14 83.2 111 48.6
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 1.4e-14 83.2 104 50.0
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 2.3e-14 82.4 104 47.1
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 2.3e-14 82.4 116 48.3
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 3.0e-14 82.0 108 49.1
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 4.0e-14 81.6 104 43.3
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 5.2e-14 81.3 101 46.5
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 5.2e-14 81.3 111 45.0
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 6.8e-14 80.9 109 46.8
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 8.9e-14 80.5 115 44.3
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 8.9e-14 80.5 104 50.0
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 8.9e-14 80.5 104 50.0
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 2.6e-13 79.0 113 46.0
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 3.4e-13 78.6 121 43.8
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 4.4e-13 78.2 104 45.2
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 7.5e-13 77.4 108 47.2
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 7.5e-13 77.4 105 42.9
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 7.5e-13 77.4 105 42.9
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 1.3e-12 76.6 105 44.8
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 1.7e-12 76.3 99 49.5
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 1.7e-12 76.3 115 41.7
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 1.7e-12 76.3 109 48.6
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 2.9e-12 75.5 109 42.2
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 2.9e-12 75.5 112 44.6
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 4.9e-12 74.7 106 45.3
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 4.9e-12 74.7 114 43.0
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 4.9e-12 74.7 113 47.8
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 6.4e-12 74.3 107 42.1
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 6.4e-12 74.3 109 42.2
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 8.3e-12 73.9 109 47.7
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 1.1e-11 73.6 104 45.2
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 1.1e-11 73.6 113 46.0
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 1.4e-11 73.2 117 41.0
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.4e-11 73.2 104 44.2
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.4e-11 73.2 104 44.2
MELO3C016294.2 Cucumis melo HOM05D007590 ORTHO05D007875 3.2e-11 72.0 108 41.7
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 3.2e-11 72.0 100 47.0
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 3.2e-11 72.0 99 46.5
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 4.1e-11 71.6 103 44.7
Sed0003477 Sechium edule HOM05D007590 ORTHO05D007875 4.1e-11 71.6 62 61.3
Ciclev10022592m.g Citrus clementina HOM05D007590 ORTHO05D007875 7.0e-11 70.9 105 43.8
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 1.2e-10 70.1 110 44.5
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 2.0e-10 69.3 71 54.9
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 2.0e-10 69.3 119 39.5
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 2.0e-10 69.3 113 42.5
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 2.7e-10 68.9 113 40.7
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 4.6e-10 68.2 65 55.4
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 6.0e-10 67.8 113 41.6
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 7.8e-10 67.4 85 48.2
BcaC04g22619 Brassica carinata HOM05D010600 ORTHO05D007875 1.0e-09 67.0 112 42.0
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.0e-09 67.0 106 41.5
BcaB07g31500 Brassica carinata HOM05D010600 ORTHO05D007875 1.3e-09 66.6 112 42.0
A09p14360 Brassica napus HOM05D010600 ORTHO05D007875 1.3e-09 66.6 113 41.6
BraA09t37083Z Brassica rapa HOM05D010600 ORTHO05D007875 1.3e-09 66.6 113 41.6
BolC9t54630H Brassica oleracea HOM05D010600 ORTHO05D007875 2.3e-09 65.9 112 41.1
Carub.0002s0036 Capsella rubella HOM05D010600 ORTHO05D007875 3.9e-09 65.1 118 38.1
BcaB07g31463 Brassica carinata HOM05D010600 ORTHO05D007875 5.0e-09 64.7 115 37.4
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 1.5e-08 63.2 106 44.3
Aa31LG2G1420 Aethionema arabicum HOM05D010600 ORTHO05D007875 1.9e-08 62.8 118 39.0
ATR0602G105 Amborella trichopoda HOM05D007590 ORTHO05D007875 1.9e-08 62.8 126 35.7
C09p17810 Brassica napus HOM05D010600 ORTHO05D007875 3.3e-08 62.0 116 38.8
BolC9t54679H Brassica oleracea HOM05D010600 ORTHO05D007875 3.3e-08 62.0 116 38.8
Migut.A00642 Erythranthe guttata HOM05D007590 ORTHO05D007875 3.3e-08 62.0 109 42.2
BcaC04g22568 Brassica carinata HOM05D010600 ORTHO05D007875 4.3e-08 61.6 115 35.7
C09p17280 Brassica napus HOM05D010600 ORTHO05D007875 4.3e-08 61.6 112 40.2
Sp2g00320 Schrenkiella parvula HOM05D010600 ORTHO05D007875 4.3e-08 61.6 119 37.8
AL2G10440 Arabidopsis lyrata HOM05D010600 ORTHO05D007875 5.6e-08 61.2 115 40.0
AT1G64405 Arabidopsis thaliana HOM05D010600 ORTHO05D007875 7.3e-08 60.8 119 38.7
PGR031G2453 Punica granatum HOM05D007590 ORTHO05D007875 9.5e-08 60.5 134 36.6
SalBow1G4032 Salvia bowleyana HOM05D007590 ORTHO05D007875 1.2e-07 60.1 102 41.2
SalBow1G6340 Salvia bowleyana HOM05D007590 ORTHO05D007875 1.2e-07 60.1 102 41.2
SGA_v2.0_scaffold305G47972 Striga asiatica HOM05D007590 ORTHO05D007875 1.2e-07 60.1 107 38.3
THA.LOC104817601 Tarenaya hassleriana HOM05D010600 ORTHO05D007875 2.8e-07 58.9 109 39.4
MBI06_g08455_MAGBIO Magnolia biondii HOM05D007590 ORTHO05D007875 8.0e-07 57.4 108 33.3
FvH4_5g04610 Fragaria vesca HOM05D007590 ORTHO05D007875 1.1e-06 57.0 50 62.0
FAN18G1504 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.1e-06 57.0 50 62.0
FAN18G3330 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.1e-06 57.0 50 62.0
HPP92_008631 Vanilla planifolia HOM05D026338 ORTHO05D007875 1.1e-06 57.0 107 36.4
Gohir.D03G083700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 5.2e-06 54.7 114 39.5
Gorai.003G079000 Gossypium raimondii HOM05D007590 ORTHO05D007875 5.2e-06 54.7 100 42.0
Eucgr.D01739 Eucalyptus grandis HOM05D007590 ORTHO05D007875 6.8e-06 54.3 138 36.2


User provided reference genes

Program Settings