Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 2.8e-138 495.4 261 100.0
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 2.8e-98 362.5 252 74.2
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 5.8e-96 354.8 245 71.0
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 5.8e-96 354.8 244 73.4
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 2.2e-95 352.8 251 69.3
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 1.1e-94 350.5 227 74.9
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.1e-94 350.5 225 75.6
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 1.4e-94 350.1 227 74.9
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 4.2e-94 348.6 254 68.1
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 5.5e-94 348.2 255 69.8
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 1.2e-93 347.1 245 69.0
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 2.1e-93 346.3 256 68.8
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 6.0e-93 344.7 249 68.7
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 1.0e-92 344.0 230 74.8
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 1.3e-92 343.6 230 75.2
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 5.1e-92 341.7 249 69.1
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 8.7e-92 340.9 244 70.1
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 2.5e-91 339.3 250 69.2
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 3.3e-91 339.0 261 67.4
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 5.7e-91 338.2 241 70.1
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 1.3e-90 337.0 257 67.7
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 1.8e-89 333.2 250 69.2
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 2.6e-88 329.3 237 70.0
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 2.6e-88 329.3 257 65.0
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 7.6e-88 327.8 254 66.1
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 7.6e-88 327.8 238 71.0
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 1.3e-87 327.0 256 68.0
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 1.3e-87 327.0 245 68.6
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 2.2e-87 326.2 236 68.6
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 2.9e-87 325.9 259 64.9
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 2.9e-87 325.9 257 63.8
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 5.0e-87 325.1 261 64.8
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 6.5e-87 324.7 255 66.7
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 6.5e-87 324.7 261 64.4
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 8.4e-87 324.3 261 62.5
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 8.4e-87 324.3 259 65.3
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 1.1e-86 323.9 240 69.6
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 2.5e-86 322.8 246 68.7
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 5.5e-86 321.6 226 70.8
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 5.5e-86 321.6 246 67.1
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 9.3e-86 320.9 261 64.4
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 9.3e-86 320.9 233 67.4
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 1.2e-85 320.5 233 67.4
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 1.6e-85 320.1 233 67.0
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 1.6e-85 320.1 236 69.1
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 2.1e-85 319.7 257 64.6
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 2.1e-85 319.7 243 67.9
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 6.1e-85 318.2 233 68.2
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 6.1e-85 318.2 245 67.3
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 1.8e-84 316.6 246 68.3
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 1.8e-84 316.6 231 68.0
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 1.8e-84 316.6 247 66.0
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 8.7e-84 314.3 246 62.2
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 8.7e-84 314.3 232 65.9
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 1.5e-83 313.5 227 67.8
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 3.3e-83 312.4 240 63.8
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 1.6e-82 310.1 225 69.3
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 3.7e-82 308.9 277 61.4
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 4.8e-82 308.5 240 62.5
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 6.3e-82 308.1 239 61.5
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 6.3e-82 308.1 247 63.2
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 6.3e-82 308.1 247 63.2
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 8.2e-82 307.8 225 68.9
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 1.8e-81 306.6 240 65.0
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 2.4e-81 306.2 254 61.0
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 2.4e-81 306.2 248 62.9
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 2.4e-81 306.2 250 62.4
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 6.9e-81 304.7 255 60.8
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 6.9e-81 304.7 225 67.1
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 1.5e-80 303.5 240 64.2
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 1.5e-80 303.5 248 62.9
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 2.6e-80 302.8 248 63.3
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 2.6e-80 302.8 248 63.3
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 4.5e-80 302.0 218 65.6
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 1.0e-79 300.8 254 59.4
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 3.8e-79 298.9 212 69.8
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 6.5e-79 298.1 226 64.2
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 6.5e-79 298.1 247 62.8
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 6.5e-79 298.1 219 65.3
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 8.5e-79 297.7 233 63.9
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 8.5e-79 297.7 233 64.8
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 1.1e-78 297.4 219 65.8
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 1.4e-78 297.0 219 65.8
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 3.2e-78 295.8 233 63.5
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 4.2e-78 295.4 227 64.3
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 4.2e-78 295.4 229 64.2
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 5.5e-78 295.0 227 64.8
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 9.4e-78 294.3 245 60.4
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 1.8e-76 290.0 195 70.3
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 2.3e-76 289.7 235 61.3
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 1.7e-74 283.5 268 57.1
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 1.1e-73 280.8 207 68.1
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 9.1e-73 277.7 232 60.3
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 2.5e-70 269.6 218 62.4
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 2.7e-69 266.2 251 57.0
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 2.7e-69 266.2 403 41.4
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 3.1e-65 252.7 185 66.5
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 1.0e-60 237.7 241 51.0
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 3.3e-59 232.6 202 56.9
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 4.4e-59 232.3 254 49.6
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 8.2e-58 228.0 230 50.0
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 4.1e-57 225.7 194 62.9
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 1.4e-49 200.7 156 66.0
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 5.7e-43 178.7 245 40.4
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 6.3e-42 175.3 133 63.9
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 4.0e-36 156.0 98 75.5
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 8.9e-36 154.8 127 58.3
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 3.4e-35 152.9 120 65.0
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 1.9e-22 110.5 96 63.5
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 4.4e-19 99.4 193 35.2
Gohir.D02G037800 Gossypium hirsutum HOM05D001530 ORTHO05D003676 6.0e-08 62.4 221 25.8
Gorai.005G041700 Gossypium raimondii HOM05D001530 ORTHO05D003676 6.0e-08 62.4 221 25.8
Cre06.g262000 Chlamydomonas reinhardtii HOM05D001530 ORTHO05D003676 7.8e-08 62.0 182 25.3
Gohir.A02G030900 Gossypium hirsutum HOM05D001530 ORTHO05D003676 1.0e-07 61.6 221 25.8
Mapoly0066s0111 Marchantia polymorpha HOM05D005243 ORTHO05D006670 1.7e-07 60.8 230 28.3
Lalb_Chr13g0304101 Lupinus albus HOM05D001530 ORTHO05D003676 3.0e-07 60.1 208 25.5
HanXRQChr13g0417201 Helianthus annuus HOM05D001082 ORTHO05D001538 5.1e-07 59.3 162 30.9
PRCOL_00001953 Prasinoderma coloniale HOM05D005243 ORTHO05D006670 5.1e-07 59.3 235 24.7
Hund16915 Selenicereus undatus HOM05D005243 ORTHO05D006670 3.3e-06 56.6 219 26.5
EL10Ac1g01265 Beta vulgaris HOM05D005243 ORTHO05D006670 7.3e-06 55.5 184 28.8
CSS0047387 Camellia sinensis var. sinensis HOM05D001530 ORTHO05D003676 7.3e-06 55.5 214 25.7
MD03G1267800 Malus domestica HOM05D001530 ORTHO05D003676 7.3e-06 55.5 233 26.2
MCO11G640 Micromonas commoda HOM05D005243 ORTHO05D006670 7.3e-06 55.5 231 26.0
Pp3c25_4890 Physcomitrium patens HOM05D001530 ORTHO05D003676 7.3e-06 55.5 235 23.8
SMO119G0058 Selaginella moellendorffii HOM05D005243 ORTHO05D006670 7.3e-06 55.5 188 27.7
DCAR_024580 Daucus carota HOM05D001530 ORTHO05D003676 9.6e-06 55.1 207 24.6
Psat1g183600 Pisum sativum HOM05D001530 ORTHO05D003676 9.6e-06 55.1 250 24.4


User provided reference genes

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