Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04203 Aquilegia oxysepala HOM05D004773 ORTHO05D005943 1.7e-182 642.5 312 100.0
MBI04_g12483_MAGBIO Magnolia biondii HOM05D004773 ORTHO05D005943 6.9e-136 487.6 309 75.7
TAR317G0002 Trochodendron aralioides HOM05D004773 ORTHO05D005943 2.5e-133 479.2 310 76.8
Nn2g15176 Nelumbo nucifera HOM05D004773 ORTHO05D005943 1.9e-125 453.0 308 71.4
MD15G1141100 Malus domestica HOM05D004773 ORTHO05D005943 3.2e-125 452.2 302 73.5
Ciclev10032178m.g Citrus clementina HOM05D004773 ORTHO05D005943 5.5e-125 451.4 302 72.2
QL09p005927 Quercus lobata HOM05D004773 ORTHO05D005943 1.6e-124 449.9 307 71.3
Thecc.05G229300 Theobroma cacao HOM05D004773 ORTHO05D005943 3.0e-123 445.7 308 71.4
Atru.chr2.1725 Acer truncatum HOM05D004773 ORTHO05D005943 3.3e-122 442.2 308 71.8
Cfa016123 Carpinus fangiana HOM05D004773 ORTHO05D005943 4.3e-122 441.8 304 71.4
Lj1P1212T41 Lonicera japonica HOM05D004773 ORTHO05D005943 4.3e-122 441.8 306 69.9
PSO063G3794 Papaver somniferum HOM05D004773 ORTHO05D005943 4.3e-122 441.8 301 72.1
Duzib128G1941 Durio zibethinus HOM05D004773 ORTHO05D005943 8.2e-121 437.6 308 69.8
CiPaw.05G210200 Carya illinoinensis HOM05D004773 ORTHO05D005943 1.4e-120 436.8 309 68.6
AUR62016916 Chenopodium quinoa HOM05D004773 ORTHO05D005943 3.1e-120 435.6 305 67.2
AUR62014736 Chenopodium quinoa HOM05D004773 ORTHO05D005943 6.9e-120 434.5 308 66.6
Manes.08G158200 Manihot esculenta HOM05D004773 ORTHO05D005943 6.9e-120 434.5 308 68.2
ATR0620G003 Amborella trichopoda HOM05D004773 ORTHO05D005943 1.2e-119 433.7 301 70.8
Carub.0006s1581 Capsella rubella HOM05D004773 ORTHO05D005943 1.2e-119 433.7 302 70.2
Hund21271 Selenicereus undatus HOM05D004773 ORTHO05D005943 2.0e-119 433.0 305 66.2
Haze_00339 Corylus avellana HOM05D004773 ORTHO05D005943 3.4e-119 432.2 304 70.1
Gohir.D11G235500 Gossypium hirsutum HOM05D004773 ORTHO05D005943 1.1e-117 427.2 307 67.4
Cpa.g.sc73.89 Carica papaya HOM05D004773 ORTHO05D005943 1.9e-117 426.4 306 67.6
Gorai.007G248200 Gossypium raimondii HOM05D004773 ORTHO05D005943 1.9e-117 426.4 307 67.4
AL6G28660 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 7.2e-117 424.5 300 68.0
Lalb_Chr06g0173871 Lupinus albus HOM05D004773 ORTHO05D005943 7.2e-117 424.5 308 65.9
vmacro15870 Vaccinium macrocarpon HOM05D004773 ORTHO05D005943 7.2e-117 424.5 308 69.2
BcaB08g36761 Brassica carinata HOM05D004773 ORTHO05D005943 9.4e-117 424.1 300 68.3
Actinidia11804 Actinidia chinensis HOM05D004773 ORTHO05D005943 1.6e-116 423.3 307 66.8
C09p59580 Brassica napus HOM05D004773 ORTHO05D005943 3.6e-116 422.2 303 68.6
BcaC04g18778 Brassica carinata HOM05D004773 ORTHO05D005943 7.9e-116 421.0 303 68.3
BolC9t58797H Brassica oleracea HOM05D004773 ORTHO05D005943 7.9e-116 421.0 303 68.3
A10p21830 Brassica napus HOM05D004773 ORTHO05D008759 1.0e-115 420.6 303 68.6
Ca_04503_v3 Cicer arietinum L. HOM05D004773 ORTHO05D005943 1.4e-115 420.2 310 65.2
Lj2g0008141 Lotus japonicus HOM05D004773 ORTHO05D005943 1.4e-115 420.2 306 67.0
Medtr6g033025 Medicago truncatula HOM05D004773 ORTHO05D005943 1.4e-115 420.2 305 65.6
Potri.013G073800 Populus trichocarpa HOM05D004773 ORTHO05D005943 1.4e-115 420.2 297 70.0
Sp6g26650 Schrenkiella parvula HOM05D004773 ORTHO05D005943 3.9e-115 418.7 300 67.0
Thhalv10014121m.g Eutrema salsugineum HOM05D004773 ORTHO05D005943 8.8e-115 417.5 311 65.9
AT5G17570 Arabidopsis thaliana HOM05D004773 ORTHO05D005943 1.1e-114 417.2 300 66.3
THA.LOC104802901 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 2.6e-114 416.0 303 65.3
TWI32G1059 Tripterygium wilfordii HOM05D004773 ORTHO05D005943 3.3e-114 415.6 303 67.7
CDE07G0301 Ceratophyllum demersum HOM05D004773 ORTHO05D005943 1.3e-113 413.7 305 65.6
Rhsim02G0120400 Rhododendron simsii HOM05D000873 ORTHO05D002948 2.8e-113 412.5 308 66.9
Hma1.2p1_0144F.1_g064840 Hydrangea macrophylla HOM05D004773 ORTHO05D005943 6.3e-113 411.4 308 66.2
Prupe.7G272000 Prunus persica HOM05D004773 ORTHO05D005943 6.3e-113 411.4 301 67.4
Sabra13G0063900 Salix brachista HOM05D004773 ORTHO05D008759 6.3e-113 411.4 305 66.9
GSVIVG01019376001 Vitis vinifera HOM05D004773 ORTHO05D005943 1.4e-112 410.2 285 69.8
Sed0007971 Sechium edule HOM05D004773 ORTHO05D005943 2.4e-112 409.5 305 64.3
arahy.Tifrunner.gnm1.ann1.WJU3K5 Arachis hypogaea HOM05D004773 ORTHO05D005943 4.1e-112 408.7 308 64.6
Psat1g096800 Pisum sativum HOM05D004773 ORTHO05D005943 4.1e-112 408.7 302 64.9
CsaV3_3G010040 Cucumis sativus L. HOM05D004773 ORTHO05D005943 3.4e-111 405.6 301 65.4
ECA234G3816 Erigeron canadensis HOM05D004773 ORTHO05D005943 7.7e-111 404.4 308 65.3
Cc02_g12570 Coffea canephora HOM05D004773 ORTHO05D005943 1.0e-110 404.1 302 64.9
MELO3C006226.2 Cucumis melo HOM05D004773 ORTHO05D005943 1.0e-110 404.1 305 64.3
Oeu053928.1 Olea europaea HOM05D004773 ORTHO05D005943 1.1e-109 400.6 306 63.7
Sc17g0006500 Simmondsia chinensis HOM05D004773 ORTHO05D005943 1.9e-109 399.8 306 64.4
Nitab4.5_0003676g0020 Nicotiana tabacum HOM05D004773 ORTHO05D005943 2.7e-108 396.0 308 62.3
DCAR_024890 Daucus carota HOM05D004773 ORTHO05D005943 3.6e-108 395.6 308 63.6
Peaxi162Scf00527g00065 Petunia axillaris HOM05D004773 ORTHO05D005943 1.4e-107 393.7 303 63.0
MSTRG.7300 Avicennia marina HOM05D004773 ORTHO05D005943 1.8e-107 393.3 303 63.7
Nitab4.5_0005399g0010 Nicotiana tabacum HOM05D004773 ORTHO05D005943 3.9e-107 392.1 309 62.1
HanXRQChr17g0555701 Helianthus annuus HOM05D004773 ORTHO05D005943 5.7e-106 388.3 303 63.0
Aa31LG11G12090 Aethionema arabicum HOM05D004773 ORTHO05D005943 7.4e-106 387.9 300 63.3
ClCG05G002600 Citrullus lanatus HOM05D004773 ORTHO05D005943 1.7e-105 386.7 353 56.1
Solyc02g078980.3 Solanum lycopersicum HOM05D004773 ORTHO05D005943 1.7e-105 386.7 308 62.3
Sopen02g023790 Solanum pennellii HOM05D004773 ORTHO05D005943 4.8e-105 385.2 308 62.3
SalBow8G5056 Salvia bowleyana HOM05D004773 ORTHO05D005943 1.4e-104 383.6 302 62.6
FAN14G1019 Fragaria x ananassa HOM05D004773 ORTHO05D005943 4.1e-104 382.1 303 65.0
FAN05G1629 Fragaria x ananassa HOM05D004773 ORTHO05D005943 9.1e-104 380.9 303 64.7
FvH4_6g13930 Fragaria vesca HOM05D004773 ORTHO05D005943 2.6e-103 379.4 303 64.7
Phvul.004G078000 Phaseolus vulgaris HOM05D004773 ORTHO05D005943 7.7e-103 377.9 273 66.7
FAN02G0119 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.0e-102 377.5 303 64.4
FAN09G4020 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.0e-102 377.5 303 64.4
FAN05G3354 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.3e-102 377.1 302 64.6
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.3e-102 377.1 302 64.6
PGSC0003DMG400022363 Solanum tuberosum HOM05D004773 ORTHO05D005943 1.3e-102 377.1 308 61.0
FAN14G4391 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.7e-102 376.7 303 64.0
Glyma.16G151100 Glycine max HOM05D004773 ORTHO05D005943 1.7e-102 376.7 276 65.9
CANSAT01G2664 Cannabis sativa HOM05D004773 ORTHO05D005943 2.2e-102 376.3 302 63.9
CAN.G1181.18 Capsicum annuum HOM05D004773 ORTHO05D005943 2.9e-102 375.9 309 61.2
Migut.M01200 Erythranthe guttata HOM05D004773 ORTHO05D005943 3.8e-102 375.6 302 61.9
FvH4_6g14060 Fragaria vesca HOM05D004773 ORTHO05D005943 6.5e-102 374.8 303 63.7
FAN09G3809 Fragaria x ananassa HOM05D004773 ORTHO05D005943 6.5e-102 374.8 303 63.7
Lsat_1_v5_gn_4_57340 Lactuca sativa HOM05D004773 ORTHO05D005943 6.5e-102 374.8 307 60.3
Eucgr.F01970 Eucalyptus grandis HOM05D004773 ORTHO05D005943 1.5e-101 373.6 300 60.3
Os04g0577500 Oryza sativa ssp. japonica HOM05D004773 ORTHO05D005943 3.2e-101 372.5 300 61.3
Zm00001eb073330 Zea mays HOM05D004773 ORTHO05D005943 3.2e-101 372.5 305 60.3
PGR102G2546 Punica granatum HOM05D004773 ORTHO05D005943 7.2e-101 371.3 300 62.3
PSO063G1994 Papaver somniferum HOM05D004773 ORTHO05D005943 1.8e-99 366.7 299 59.9
HanXRQChr12g0364651 Helianthus annuus HOM05D004773 ORTHO05D005943 6.7e-99 364.8 302 58.6
FAN09G2979 Fragaria x ananassa HOM05D004773 ORTHO05D005943 8.8e-99 364.4 302 63.6
ECA234G0571 Erigeron canadensis HOM05D000140 ORTHO05D000087 1.3e-97 360.5 306 57.5
HPP92_001431 Vanilla planifolia HOM05D004773 ORTHO05D005943 1.3e-97 360.5 307 59.3
HPP92_001439 Vanilla planifolia HOM05D004773 ORTHO05D005943 1.7e-97 360.1 309 58.9
CARHR195610 Cardamine hirsuta HOM05D004773 ORTHO05D005943 4.8e-97 358.6 262 66.4
Cc02_g14730 Coffea canephora HOM05D004773 ORTHO05D005943 1.8e-96 356.7 301 57.5
Gohir.A11G222000 Gossypium hirsutum HOM05D004773 ORTHO05D005943 1.6e-95 353.6 237 70.0
THA.LOC104802900 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 7.7e-95 351.3 300 58.3
arahy.Tifrunner.gnm1.ann1.KNV4WG Arachis hypogaea HOM05D004773 ORTHO05D005943 2.2e-94 349.7 308 57.1
SGA_v2.0_scaffold114G31969 Striga asiatica HOM05D004773 ORTHO05D005943 2.2e-94 349.7 302 57.3
Eucgr.F01964 Eucalyptus grandis HOM05D004773 ORTHO05D005943 6.1e-92 341.7 306 55.9
Duzib177G1208 Durio zibethinus HOM05D004773 ORTHO05D005943 5.7e-90 335.1 300 55.0
AUR62014585 Chenopodium quinoa HOM05D004773 ORTHO05D005943 9.8e-90 334.3 305 55.4
PSO782G1422 Papaver somniferum HOM05D004773 ORTHO05D005943 1.3e-89 334.0 203 76.8
Thecc.05G229900 Theobroma cacao HOM05D004773 ORTHO05D005943 6.3e-89 331.6 301 55.1
AL3G12620 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 8.3e-89 331.3 301 55.5
Carub.0003s0264 Capsella rubella HOM05D004773 ORTHO05D005943 2.4e-88 329.7 301 54.5
AUR62012595 Chenopodium quinoa HOM05D004773 ORTHO05D005943 7.0e-88 328.2 246 61.4
SHI39094 Sapria himalayana HOM05D004773 ORTHO05D005943 1.6e-87 327.0 349 51.0
Aa31LG5G14030 Aethionema arabicum HOM05D004773 ORTHO05D005943 3.5e-87 325.9 301 53.8
Dinv40507 Davidia involucrata HOM05D004773 ORTHO05D005943 4.5e-87 325.5 308 57.8
Pp3c12_11300 Physcomitrium patens HOM05D004773 ORTHO05D005943 5.9e-87 325.1 310 50.0
Gohir.D13G163600 Gossypium hirsutum HOM05D004773 ORTHO05D005943 3.8e-86 322.4 300 52.7
TPR.G6097 Trifolium pratense HOM05D004773 ORTHO05D005943 3.2e-85 319.3 315 54.0
A06p26410 Brassica napus HOM05D004773 ORTHO05D005943 2.1e-84 316.6 301 52.2
BNapus_Darmor_BZH_scaffold_78p00160 Brassica napus HOM05D004773 ORTHO05D005943 2.1e-84 316.6 301 52.2
Gohir.A13G158600 Gossypium hirsutum HOM05D004773 ORTHO05D005943 2.1e-84 316.6 300 52.3
BNapus_Darmor_BZH_scaffold_162p00180 Brassica napus HOM05D004773 ORTHO05D005943 5.2e-83 312.0 302 52.0
BolC1t05828H Brassica oleracea HOM05D004773 ORTHO05D005943 5.2e-83 312.0 302 52.0
BraA01t04577Z Brassica rapa HOM05D004773 ORTHO05D005943 6.8e-83 311.6 303 51.8
FAN02G4326 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.2e-82 310.8 207 72.0
Gorai.013G199600 Gossypium raimondii HOM05D004773 ORTHO05D005943 2.6e-82 309.7 300 51.7
SMO367G0365 Selaginella moellendorffii HOM05D004773 ORTHO05D005943 5.7e-82 308.5 304 49.7
AagrBONN_evm.TU.Sc2ySwM_362.2127 Anthoceros agrestis HOM05D004773 ORTHO05D005943 9.8e-82 307.8 307 49.5
Mapoly0004s0110 Marchantia polymorpha HOM05D004773 ORTHO05D005943 9.5e-77 291.2 305 47.5
BcaC09g47749 Brassica carinata HOM05D004773 ORTHO05D005943 1.6e-76 290.4 319 47.3
CBR_g32162 Chara braunii HOM05D004773 ORTHO05D001111 3.6e-76 289.3 313 47.3
AT3G03500 Arabidopsis thaliana HOM05D004773 ORTHO05D005943 7.0e-72 275.0 196 65.3
AUR62014597 Chenopodium quinoa HOM05D004773 ORTHO05D005943 2.0e-66 256.9 216 56.9
Thhalv10021316m.g Eutrema salsugineum HOM05D004773 ORTHO05D005943 2.9e-65 253.1 253 50.2
unitig_37.g12340 Utricularia gibba HOM05D004773 ORTHO05D005943 1.3e-57 227.6 151 68.2
VMungo0464G1467 Vigna mungo HOM05D004773 ORTHO05D005943 3.3e-53 213.0 172 57.0
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 8.9e-51 204.9 207 54.1
COL.COLO4_31150 Corchorus olitorius HOM05D004773 ORTHO05D005943 5.8e-50 202.2 144 61.8
Sp3g02490 Schrenkiella parvula HOM05D004773 ORTHO05D005943 1.7e-46 190.7 341 37.2
VMungo0464G0773 Vigna mungo HOM05D004773 ORTHO05D005943 6.6e-46 188.7 161 61.5
CAN.G1247.2 Capsicum annuum HOM05D004773 ORTHO05D005943 1.5e-34 151.0 225 38.7
RcHm_v2.0_Chr3g0466941 Rosa chinensis HOM05D004773 ORTHO05D005943 2.6e-34 150.2 159 54.7
SEGI_00738 Sequoiadendron giganteum HOM05D004773 ORTHO05D005943 2.4e-27 127.1 152 48.0
Cre17.g717200 Chlamydomonas reinhardtii HOM05D004773 ORTHO05D005943 8.4e-25 118.6 263 31.9
HPP92_010162 Vanilla planifolia HOM05D004773 ORTHO05D005943 4.2e-24 116.3 79 59.5
PRCOL_00005876 Prasinoderma coloniale HOM05D004773 ORTHO05D005943 1.8e-22 110.9 238 32.4
MCO10G115 Micromonas commoda HOM05D004773 ORTHO05D005943 6.7e-22 109.0 234 30.3
Nn2g15177 Nelumbo nucifera HOM05D004773 ORTHO05D005943 3.7e-20 103.2 96 62.5
Cre03.g169800 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D005943 1.0e-17 95.1 315 23.8
AL6G10940 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 9.3e-16 88.6 71 59.2
Glyma.16G150900 Glycine max HOM05D004773 ORTHO05D005943 7.9e-15 85.5 89 51.7
TPR.G35071 Trifolium pratense HOM05D004773 ORTHO05D005943 2.3e-14 84.0 52 71.2
AUR62014598 Chenopodium quinoa HOM05D004773 ORTHO05D005943 3.0e-14 83.6 84 51.2
PGSC0003DMG400004239 Solanum tuberosum HOM05D004773 ORTHO05D005943 1.5e-13 81.3 52 63.5
Zm00001eb117460 Zea mays HOM05D005131 ORTHO05D006645 2.4e-11 73.9 317 27.4
AL3G13200 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 1.2e-10 71.6 52 59.6
SEGI_31644 Sequoiadendron giganteum HOM05D004773 ORTHO05D005943 1.7e-09 67.8 53 60.4
Pp3c8_2710 Physcomitrium patens HOM05D004773 ORTHO05D005943 4.2e-08 63.2 95 32.6
Cre02.g085650 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D006645 1.2e-07 61.6 222 29.3
MCO14G398 Micromonas commoda HOM05D005131 ORTHO05D006645 1.2e-07 61.6 215 28.4
Haze_27322 Corylus avellana HOM05D005131 ORTHO05D006645 4.6e-07 59.7 230 23.0
MCO10G056 Micromonas commoda HOM05D005131 ORTHO05D006645 3.0e-06 57.0 169 26.6
Mapoly0052s0020 Marchantia polymorpha HOM05D005131 ORTHO05D006645 8.7e-06 55.5 220 27.7


User provided reference genes

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