Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 4.9e-202 707.6 359 100.0
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 4.0e-196 688.0 353 98.9
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 1.0e-106 391.0 349 59.3
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 1.7e-101 373.6 362 56.9
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 4.1e-100 369.0 360 56.7
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 3.5e-99 365.9 356 58.1
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 4.5e-99 365.5 354 55.6
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 4.5e-99 365.5 349 56.7
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 1.0e-98 364.4 357 55.5
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 6.6e-98 361.7 353 54.7
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 6.6e-98 361.7 347 56.5
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 1.1e-97 360.9 356 54.8
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 1.1e-97 360.9 350 55.1
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 3.3e-97 359.4 356 54.5
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 4.3e-97 359.0 352 54.5
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 1.0e-95 354.4 360 51.1
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 1.2e-94 350.9 349 54.7
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 2.0e-94 350.1 361 54.3
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 3.4e-94 349.4 351 53.3
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 9.8e-94 347.8 360 54.2
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 1.3e-93 347.4 363 52.3
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 3.5e-91 339.3 350 53.4
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 6.0e-91 338.6 362 52.2
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.0e-90 337.8 350 52.9
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 8.6e-90 334.7 357 51.3
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.1e-89 334.3 350 52.0
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 2.5e-89 333.2 352 51.4
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.5e-89 333.2 350 52.0
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.3e-89 332.8 350 52.3
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 5.6e-89 332.0 357 50.4
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 9.5e-89 331.3 350 51.7
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.6e-88 330.5 350 52.0
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 1.6e-88 330.5 353 54.4
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 6.2e-88 328.6 337 52.8
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 1.1e-87 327.8 350 52.6
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 2.3e-87 326.6 416 45.9
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 2.6e-86 323.2 349 50.7
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 5.8e-86 322.0 337 52.2
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 7.5e-86 321.6 353 53.0
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 1.3e-85 320.9 351 49.3
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 1.7e-85 320.5 367 50.1
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 4.9e-85 318.9 343 51.6
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 4.9e-85 318.9 334 52.4
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 6.4e-85 318.5 328 54.6
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 6.4e-85 318.5 359 50.1
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 6.4e-85 318.5 347 50.7
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 8.3e-85 318.2 360 50.6
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 1.4e-84 317.4 356 49.2
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 1.4e-84 317.4 311 54.3
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 7.0e-84 315.1 339 51.9
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 9.2e-84 314.7 351 51.6
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 6.0e-83 312.0 341 51.6
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 6.0e-83 312.0 349 50.1
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 7.8e-83 311.6 364 50.0
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 1.1e-81 307.8 362 51.1
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 1.5e-81 307.4 365 47.9
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 1.9e-81 307.0 348 50.0
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 9.5e-81 304.7 369 48.8
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.6e-80 303.9 250 61.6
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 2.8e-80 303.1 280 54.3
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 1.1e-79 301.2 281 55.5
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 3.1e-79 299.7 365 48.5
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 6.8e-79 298.5 377 47.2
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 3.4e-78 296.2 289 54.3
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 5.8e-78 295.4 355 46.2
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 9.9e-78 294.7 354 47.2
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 2.2e-77 293.5 349 48.1
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 3.7e-77 292.7 286 54.2
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 9.2e-76 288.1 367 44.4
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.6e-75 287.3 355 45.9
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 3.5e-75 286.2 355 47.3
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 5.6e-73 278.9 370 45.1
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 1.2e-72 277.7 359 44.8
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 5.8e-70 268.9 438 40.9
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 7.6e-70 268.5 366 45.9
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 1.4e-68 264.2 280 51.8
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 1.4e-68 264.2 203 62.1
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.9e-68 263.8 324 46.6
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 4.2e-68 262.7 278 51.4
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 7.1e-68 261.9 362 44.2
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 6.0e-67 258.8 350 44.6
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 1.4e-63 247.7 374 42.2
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 1.4e-63 247.7 297 48.1
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 4.9e-61 239.2 362 44.5
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 2.3e-58 230.3 425 39.1
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 3.6e-56 223.0 246 52.8
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 2.0e-54 217.2 253 50.2
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.3e-53 214.5 371 38.8
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 1.2e-51 208.0 566 31.4
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 6.0e-51 205.7 271 46.9
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 7.9e-51 205.3 253 46.6
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 6.7e-50 202.2 347 38.3
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 9.0e-47 191.8 226 48.2
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 1.5e-46 191.0 250 46.4
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.7e-45 187.6 171 53.8
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 3.8e-45 186.4 326 36.8
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 2.3e-42 177.2 218 46.3
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 1.9e-41 174.1 166 48.2
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 6.5e-37 159.1 150 58.0
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 1.2e-35 154.8 105 70.5
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-28 131.3 327 29.4
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 3.7e-24 116.7 173 35.3
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 3.1e-15 87.0 225 31.1
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 3.5e-14 83.6 233 27.5
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 2.5e-12 77.4 106 41.5
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 2.5e-12 77.4 119 43.7
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.2e-11 75.1 44 72.7
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 6.1e-11 72.8 118 41.5
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 2.3e-10 70.9 48 64.6
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 2.3e-10 70.9 67 55.2
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 3.0e-10 70.5 118 41.5
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 7.4e-09 65.9 381 24.1
HPP92_022101 Vanilla planifolia HOM05D006946 ORTHO05D008634 7.4e-09 65.9 52 57.7
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 2.0e-06 57.8 37 64.9
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 7.7e-06 55.8 180 31.7


User provided reference genes

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