Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 3.3e-175 618.2 304 100.0
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 6.1e-145 517.7 274 88.0
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 1.8e-144 516.2 275 86.5
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 3.7e-142 508.4 275 85.8
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 4.8e-142 508.1 275 86.5
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 5.3e-141 504.6 274 85.0
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 6.9e-141 504.2 273 86.1
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 1.5e-140 503.1 275 85.1
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 5.9e-140 501.1 286 83.6
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 7.7e-140 500.7 273 85.0
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 1.3e-139 500.0 274 84.3
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 2.2e-139 499.2 285 82.8
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 2.2e-139 499.2 284 83.5
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 3.8e-139 498.4 273 85.3
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 5.0e-139 498.0 281 82.9
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.1e-138 496.9 273 83.2
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 1.4e-138 496.5 269 85.5
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 2.5e-138 495.7 277 82.7
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 2.5e-138 495.7 274 83.6
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 4.2e-138 495.0 285 82.1
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 7.2e-138 494.2 281 82.9
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 9.4e-138 493.8 285 82.1
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 2.1e-137 492.7 273 83.2
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 2.7e-137 492.3 275 83.3
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 4.7e-137 491.5 281 81.1
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 4.7e-137 491.5 281 81.1
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 6.1e-137 491.1 281 81.5
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 7.9e-137 490.7 272 84.2
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 7.9e-137 490.7 283 80.6
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 1.4e-136 490.0 273 83.5
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 1.8e-136 489.6 295 79.3
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 5.1e-136 488.0 308 77.3
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 5.1e-136 488.0 275 83.3
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 1.1e-135 486.9 284 80.3
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 1.5e-135 486.5 268 84.0
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 2.6e-135 485.7 275 82.9
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 3.3e-135 485.3 269 82.2
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 4.4e-135 485.0 275 82.9
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 2.2e-134 482.6 269 83.6
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 6.3e-134 481.1 286 78.0
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 8.2e-134 480.7 272 81.2
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 1.8e-133 479.6 253 87.4
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 3.1e-133 478.8 300 77.3
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 4.1e-133 478.4 274 80.7
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 5.3e-133 478.0 274 80.3
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 5.3e-133 478.0 277 79.8
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 7.0e-133 477.6 274 80.3
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 7.0e-133 477.6 280 79.3
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 9.1e-133 477.2 263 85.2
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 1.2e-132 476.9 274 80.3
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 1.5e-132 476.5 274 80.3
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 2.6e-132 475.7 280 79.3
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 4.5e-132 474.9 280 80.0
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 1.3e-131 473.4 279 78.9
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 1.3e-131 473.4 285 77.2
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 2.2e-131 472.6 273 80.2
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 3.8e-131 471.9 306 74.5
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 3.8e-131 471.9 281 79.0
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 5.0e-131 471.5 279 79.2
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 5.0e-131 471.5 279 79.2
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 6.5e-131 471.1 269 79.9
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 1.5e-130 469.9 299 75.6
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 2.5e-130 469.2 275 81.8
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 3.2e-130 468.8 280 77.5
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 4.2e-130 468.4 292 74.7
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 4.2e-130 468.4 274 79.6
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 7.2e-130 467.6 270 79.6
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.6e-129 466.5 289 76.1
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 2.1e-129 466.1 274 78.8
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 2.1e-129 466.1 273 78.8
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 2.1e-129 466.1 277 81.2
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 2.1e-129 466.1 269 79.6
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 4.7e-129 464.9 280 77.9
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 6.1e-129 464.5 274 78.5
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 8.0e-129 464.2 274 78.1
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 6.7e-128 461.1 276 78.3
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 6.7e-128 461.1 315 70.8
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 6.7e-128 461.1 274 77.0
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 8.8e-128 460.7 273 78.0
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 2.0e-127 459.5 281 76.9
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 3.3e-127 458.8 282 76.6
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 4.4e-127 458.4 287 75.3
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 1.4e-125 453.4 273 78.0
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 1.4e-125 453.4 269 77.3
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 1.8e-125 453.0 275 76.7
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 2.4e-125 452.6 286 77.3
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 4.1e-125 451.8 282 77.0
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.2e-124 450.3 275 76.0
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.0e-124 449.5 275 76.4
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 7.7e-124 447.6 301 72.1
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 1.3e-123 446.8 271 76.0
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 1.3e-123 446.8 271 76.0
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 3.8e-123 445.3 269 75.8
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 5.0e-123 444.9 269 76.6
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 1.1e-122 443.7 277 78.0
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 1.5e-122 443.4 269 76.2
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 7.2e-122 441.0 273 77.3
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 3.0e-120 435.6 317 67.8
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 3.4e-119 432.2 283 71.7
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 5.7e-119 431.4 206 100.0
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 3.7e-118 428.7 266 74.1
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 4.8e-118 428.3 268 73.5
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.7e-116 422.5 239 89.5
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 3.8e-115 418.7 358 60.3
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 5.5e-114 414.8 237 81.4
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 9.4e-114 414.1 269 71.4
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 2.1e-113 412.9 303 66.7
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 3.6e-113 412.1 273 71.8
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 1.5e-106 390.2 215 84.7
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 1.5e-106 390.2 225 81.3
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.9e-106 389.8 275 69.8
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.6e-105 386.7 238 76.5
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 7.0e-101 371.3 192 89.1
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 2.7e-100 369.4 292 63.7
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 1.0e-99 367.5 209 80.9
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 3.6e-97 359.0 276 58.3
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 2.6e-95 352.8 290 58.3
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 5.4e-93 345.1 275 60.0
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 4.0e-88 328.9 189 80.4
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 4.0e-88 328.9 189 80.4
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.3e-78 297.4 226 66.4
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 3.7e-78 295.8 226 61.9
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 4.6e-76 288.9 271 52.8
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.3e-70 270.8 297 50.2
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 6.0e-68 261.9 156 80.8
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 4.3e-66 255.8 154 77.9
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 4.0e-64 249.2 181 63.0
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 3.0e-59 233.0 210 51.4
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 4.5e-55 219.2 264 45.5
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 7.6e-55 218.4 131 76.3
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 9.6e-50 201.4 228 49.6
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 6.5e-38 162.2 272 37.9
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 8.4e-38 161.8 211 41.2
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 7.2e-37 158.7 94 73.4
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 7.2e-29 132.1 98 63.3
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 1.2e-28 131.3 110 59.1
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 2.2e-14 84.0 65 56.9
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 3.6e-12 76.6 45 73.3
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 1.0e-11 75.1 37 83.8


User provided reference genes

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