Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03939 Aquilegia oxysepala HOM05D003513 ORTHO05D004660 4.4e-107 391.7 237 100.0
TAR375G0591 Trochodendron aralioides HOM05D003513 ORTHO05D004660 1.6e-61 240.4 245 58.8
CSS0016653 Camellia sinensis var. sinensis HOM05D003513 ORTHO05D004660 3.6e-56 222.6 245 56.3
MBI18_g04900_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.8e-55 220.3 236 55.5
MBI18_g12443_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.8e-55 220.3 236 54.7
vmacro01922 Vaccinium macrocarpon HOM05D003513 ORTHO05D004660 6.7e-55 218.4 238 56.3
GSVIVG01036987001 Vitis vinifera HOM05D003513 ORTHO05D004660 1.3e-53 214.2 241 56.4
Actinidia00338 Actinidia chinensis HOM05D003513 ORTHO05D004660 3.7e-53 212.6 237 61.2
Rhsim11G0147300 Rhododendron simsii HOM05D003513 ORTHO05D004660 1.4e-52 210.7 262 53.1
Ciclev10028868m.g Citrus clementina HOM05D003513 ORTHO05D004660 1.2e-51 207.6 218 57.8
Hma1.2p1_0661F.1_g197860 Hydrangea macrophylla HOM05D003513 ORTHO05D004660 1.3e-50 204.1 222 55.4
Lj9A339T51 Lonicera japonica HOM05D003513 ORTHO05D004660 2.2e-50 203.4 222 55.4
Dinv17746 Davidia involucrata HOM05D003513 ORTHO05D004660 6.5e-50 201.8 231 56.7
Cfa003376 Carpinus fangiana HOM05D003513 ORTHO05D004660 1.1e-49 201.1 237 53.2
MD05G1110900 Malus domestica HOM05D003513 ORTHO05D004660 1.4e-49 200.7 242 53.3
Actinidia02426 Actinidia chinensis HOM05D003513 ORTHO05D004660 1.9e-49 200.3 224 55.4
Duzib248G1448 Durio zibethinus HOM05D003513 ORTHO05D004660 1.2e-48 197.6 237 53.2
QL11p027784 Quercus lobata HOM05D003513 ORTHO05D004660 1.2e-48 197.6 236 53.4
Duzib052G1139 Durio zibethinus HOM05D003513 ORTHO05D004660 1.6e-48 197.2 235 53.6
Sabra09G0063800 Salix brachista HOM05D003513 ORTHO05D004660 1.6e-48 197.2 229 52.4
COL.COLO4_17824 Corchorus olitorius HOM05D003513 ORTHO05D004660 2.1e-48 196.8 245 52.7
Atru.chr4.2879 Acer truncatum HOM05D003513 ORTHO05D004660 2.7e-48 196.4 224 52.7
Prupe.8G155900 Prunus persica HOM05D003513 ORTHO05D004660 1.4e-47 194.1 227 52.4
Potri.009G082200 Populus trichocarpa HOM05D003513 ORTHO05D004660 1.8e-47 193.7 229 52.4
Gohir.A03G213100 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.3e-47 193.4 238 50.4
Cfa004752 Carpinus fangiana HOM05D003513 ORTHO05D004660 3.9e-47 192.6 219 55.3
Thecc.02G033900 Theobroma cacao HOM05D003513 ORTHO05D004660 3.9e-47 192.6 236 51.3
TWI14G0477 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 3.9e-47 192.6 241 50.6
Nn4g22684 Nelumbo nucifera HOM05D003513 ORTHO05D004660 1.1e-46 191.0 333 40.8
FAN15G2646 Fragaria x ananassa HOM05D003513 ORTHO05D004660 2.0e-46 190.3 239 50.2
FAN24G3528 Fragaria x ananassa HOM05D003513 ORTHO05D004660 2.6e-46 189.9 239 49.8
PGR042G0778 Punica granatum HOM05D003513 ORTHO05D004660 3.3e-46 189.5 231 51.9
TWI23G0398 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 3.3e-46 189.5 237 48.1
Solyc01g106560.4 Solanum lycopersicum HOM05D003513 ORTHO05D004660 9.7e-46 188.0 238 50.4
FvH4_2g02710 Fragaria vesca HOM05D003513 ORTHO05D004660 1.3e-45 187.6 238 49.6
Gorai.005G262600 Gossypium raimondii HOM05D003513 ORTHO05D004660 1.7e-45 187.2 211 54.5
Gohir.D02G234600 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.2e-45 186.8 211 54.5
RcHm_v2.0_Chr6g0247131 Rosa chinensis HOM05D003513 ORTHO05D004660 2.2e-45 186.8 235 49.4
Oeu010478.1 Olea europaea HOM05D003513 ORTHO05D004660 2.8e-45 186.4 237 51.5
ClCG02G003790 Citrullus lanatus HOM05D003513 ORTHO05D004660 3.7e-45 186.0 226 51.3
FAN20G2897 Fragaria x ananassa HOM05D003513 ORTHO05D004660 4.8e-45 185.7 231 50.2
FAN27G0638 Fragaria x ananassa HOM05D003513 ORTHO05D004660 4.8e-45 185.7 231 50.6
MELO3C013317.2 Cucumis melo HOM05D003513 ORTHO05D004660 6.3e-45 185.3 225 52.0
Manes.07G049900 Manihot esculenta HOM05D003513 ORTHO05D004660 8.2e-45 184.9 210 55.2
Sopen01g048910 Solanum pennellii HOM05D003513 ORTHO05D004660 8.2e-45 184.9 238 49.6
EL10Ac4g09206 Beta vulgaris HOM05D003513 ORTHO05D004660 1.1e-44 184.5 241 50.6
CsaV3_7G001360 Cucumis sativus L. HOM05D003513 ORTHO05D004660 4.1e-44 182.6 227 50.2
PGSC0003DMG400005104 Solanum tuberosum HOM05D003513 ORTHO05D004660 4.1e-44 182.6 238 49.2
CANSAT11G1387 Cannabis sativa HOM05D003513 ORTHO05D004660 7.0e-44 181.8 217 50.7
PSO339G4304 Papaver somniferum HOM05D003513 ORTHO05D004660 9.1e-44 181.4 216 52.3
PSO384G0236 Papaver somniferum HOM05D003513 ORTHO05D004660 1.5e-43 180.6 249 48.2
Medtr2g010510 Medicago truncatula HOM05D003513 ORTHO05D004660 5.9e-43 178.7 232 49.1
Os07g0213400 Oryza sativa ssp. japonica HOM05D003513 ORTHO05D004660 5.9e-43 178.7 236 47.5
CiPaw.16G055200 Carya illinoinensis HOM05D003513 ORTHO05D004660 1.3e-42 177.6 229 52.0
ECA236G2279 Erigeron canadensis HOM05D003513 ORTHO05D004660 1.7e-42 177.2 241 49.4
SalBow6G6243 Salvia bowleyana HOM05D003513 ORTHO05D004660 1.7e-42 177.2 240 48.8
Oeu059873.1 Olea europaea HOM05D003513 ORTHO05D004660 2.2e-42 176.8 237 46.4
Cc02_g20350 Coffea canephora HOM05D003513 ORTHO05D004660 2.9e-42 176.4 248 48.0
Ca_00197_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 3.8e-42 176.0 216 50.9
MSTRG.8971 Avicennia marina HOM05D003513 ORTHO05D004660 5.0e-42 175.6 239 47.7
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 8.5e-42 174.9 233 45.9
MSTRG.8970 Avicennia marina HOM05D003513 ORTHO05D004660 1.4e-41 174.1 239 46.9
Potri.001G287900 Populus trichocarpa HOM05D003513 ORTHO05D004660 2.5e-41 173.3 239 48.5
Zm00001eb325060 Zea mays HOM05D003513 ORTHO05D004660 3.2e-41 172.9 215 47.4
Sed0007617 Sechium edule HOM05D003513 ORTHO05D004660 4.2e-41 172.6 208 52.4
Lalb_Chr18g0060191 Lupinus albus HOM05D003513 ORTHO05D004660 5.5e-41 172.2 277 53.8
Peaxi162Scf00016g03328 Petunia axillaris HOM05D003513 ORTHO05D004660 5.5e-41 172.2 232 48.3
Lj1g0004946 Lotus japonicus HOM05D003513 ORTHO05D004660 9.4e-41 171.4 236 50.0
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 9.4e-41 171.4 242 47.9
DCAR_029853 Daucus carota HOM05D003513 ORTHO05D004660 1.6e-40 170.6 244 55.7
arahy.Tifrunner.gnm1.ann1.2E8PRH Arachis hypogaea HOM05D003513 ORTHO05D004660 2.1e-40 170.2 265 42.3
THA.LOC104807196 Tarenaya hassleriana HOM05D003513 ORTHO05D004660 2.7e-40 169.9 210 50.0
unitig_0.g631 Utricularia gibba HOM05D003513 ORTHO05D004660 2.7e-40 169.9 212 48.6
CiPaw.05G024600 Carya illinoinensis HOM05D003513 ORTHO05D004660 3.6e-40 169.5 211 52.6
Lj6g0027000 Lotus japonicus HOM05D003513 ORTHO05D004660 3.6e-40 169.5 244 54.1
arahy.Tifrunner.gnm1.ann1.SQB86K Arachis hypogaea HOM05D003513 ORTHO05D004660 4.7e-40 169.1 265 42.3
Eucgr.I02512 Eucalyptus grandis HOM05D003513 ORTHO05D004660 1.0e-39 167.9 211 53.1
Lsat_1_v5_gn_7_84220 Lactuca sativa HOM05D003513 ORTHO05D004660 1.8e-39 167.2 239 44.8
arahy.Tifrunner.gnm1.ann1.K4QFJX Arachis hypogaea HOM05D003513 ORTHO05D004660 2.3e-39 166.8 265 41.9
SHI04900 Sapria himalayana HOM05D003513 ORTHO05D004660 2.3e-39 166.8 199 51.3
ATR0681G195 Amborella trichopoda HOM05D003513 ORTHO05D004660 3.9e-39 166.0 258 43.8
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 5.2e-39 165.6 242 44.2
Glyma.15G062000 Glycine max HOM05D003513 ORTHO05D004660 8.8e-39 164.9 261 44.8
SGA_v2.0_scaffold32G12967 Striga asiatica HOM05D003513 ORTHO05D004660 1.1e-38 164.5 217 47.0
VMungo0540G2261 Vigna mungo HOM05D003513 ORTHO05D004660 5.7e-38 162.2 252 54.4
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 7.4e-38 161.8 248 44.8
Glyma.13G253000 Glycine max HOM05D003513 ORTHO05D004660 1.3e-37 161.0 268 46.3
MD10G1114400 Malus domestica HOM05D003513 ORTHO05D004660 1.3e-37 161.0 224 45.5
Psat1g212080 Pisum sativum HOM05D003513 ORTHO05D004660 2.2e-37 160.2 192 51.0
HPP92_011751 Vanilla planifolia HOM05D003513 ORTHO05D004660 2.2e-37 160.2 241 43.6
Lj6g0027758 Lotus japonicus HOM05D003513 ORTHO05D004660 8.2e-37 158.3 272 48.5
CDE07G1727 Ceratophyllum demersum HOM05D003513 ORTHO05D004660 4.1e-36 156.0 254 41.7
AL7G17790 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 7.0e-36 155.2 220 45.9
arahy.Tifrunner.gnm1.ann1.C4ZNB5 Arachis hypogaea HOM05D003513 ORTHO05D004660 9.1e-36 154.8 271 41.3
Sp7g31420 Schrenkiella parvula HOM05D003513 ORTHO05D004660 1.2e-35 154.5 221 46.6
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 2.0e-35 153.7 246 43.9
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 7.7e-35 151.8 247 42.9
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 2.9e-34 149.8 237 42.6
AT4G33690 Arabidopsis thaliana HOM05D003513 ORTHO05D004660 5.0e-34 149.1 209 49.3
C01p05020 Brassica napus HOM05D003513 ORTHO05D004660 5.0e-34 149.1 228 43.4
BcaC09g52179 Brassica carinata HOM05D003513 ORTHO05D004660 8.5e-34 148.3 228 43.9
BolC1t00484H Brassica oleracea HOM05D003513 ORTHO05D004660 8.5e-34 148.3 228 43.9
Dinv03362 Davidia involucrata HOM05D003513 ORTHO05D004660 1.1e-33 147.9 160 56.2
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 2.5e-33 146.7 238 42.9
CDE04G2077 Ceratophyllum demersum HOM05D000016 ORTHO05D000538 3.2e-33 146.4 203 46.8
BraA01t00446Z Brassica rapa HOM05D003513 ORTHO05D004660 4.2e-33 146.0 232 47.8
AUR62005013 Chenopodium quinoa HOM05D003513 ORTHO05D004660 7.2e-33 145.2 218 44.5
HanXRQChr17g0550541 Helianthus annuus HOM05D003513 ORTHO05D004660 1.6e-32 144.1 212 46.2
Sabra16G0180200 Salix brachista HOM05D003513 ORTHO05D004660 2.1e-32 143.7 260 40.8
Atru.chr5.2163 Acer truncatum HOM05D003513 ORTHO05D004660 2.7e-32 143.3 156 56.4
A01p04630 Brassica napus HOM05D003513 ORTHO05D004660 8.0e-32 141.7 242 45.5
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 1.0e-31 141.4 193 46.6
Cpa.g.sc20.72 Carica papaya HOM05D003513 ORTHO05D004660 1.8e-31 140.6 157 54.1
SEGI_16177 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 3.0e-31 139.8 272 36.4
Mapoly0037s0029 Marchantia polymorpha HOM05D003513 ORTHO05D004660 6.8e-31 138.7 236 39.8
AUR62000955 Chenopodium quinoa HOM05D003513 ORTHO05D004660 3.4e-30 136.3 216 43.1
SMO119G0189 Selaginella moellendorffii HOM05D003513 ORTHO05D004660 7.5e-30 135.2 228 39.5
Pp3c17_21630 Physcomitrium patens HOM05D003513 ORTHO05D004660 4.8e-29 132.5 237 37.1
HPP92_025257 Vanilla planifolia HOM05D003513 ORTHO05D004660 1.8e-28 130.6 233 39.9
AagrBONN_evm.TU.Sc2ySwM_289.2 Anthoceros agrestis HOM05D003513 ORTHO05D004660 2.4e-28 130.2 230 39.6
AagrBONN_evm.TU.Sc2ySwM_362.2667 Anthoceros agrestis HOM05D003513 ORTHO05D004660 2.4e-28 130.2 230 39.6
Nitab4.5_0001477g0150 Nicotiana tabacum HOM05D003513 ORTHO05D004660 9.1e-28 128.3 242 39.7
SEGI_38183 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 2.7e-27 126.7 233 39.1
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 2.2e-26 123.6 198 47.5
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 1.5e-25 120.9 177 45.8
Carub.0007s0673 Capsella rubella HOM05D003513 ORTHO05D004660 2.5e-25 120.2 93 67.7
Hund24144 Selenicereus undatus HOM05D003513 ORTHO05D004660 3.0e-23 113.2 180 40.6
TAR629G2534 Trochodendron aralioides HOM05D003513 ORTHO05D004660 1.5e-22 110.9 90 70.0
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 2.6e-22 110.2 202 42.1
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 2.6e-22 110.2 202 42.1
BcaB02g10961 Brassica carinata HOM05D003513 ORTHO05D004660 5.4e-20 102.4 86 65.1
Glyma.07G229300 Glycine max HOM05D003513 ORTHO05D004660 7.0e-20 102.1 73 71.2
Nitab4.5_0007763g0010 Nicotiana tabacum HOM05D003513 ORTHO05D004660 7.0e-20 102.1 184 39.7
Sc21g0000900 Simmondsia chinensis HOM05D003513 ORTHO05D004660 1.6e-19 100.9 154 40.9
BcaC08g44431 Brassica carinata HOM05D003513 ORTHO05D013524 1.7e-18 97.4 201 37.3
A09p29610 Brassica napus HOM05D003513 ORTHO05D004660 2.3e-18 97.1 202 40.6
Zm00001eb303370 Zea mays HOM05D003513 ORTHO05D004660 2.3e-18 97.1 141 39.7
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 6.6e-18 95.5 205 37.6
A04p04130 Brassica napus HOM05D003513 ORTHO05D004660 6.6e-18 95.5 200 40.0
CAN.G192.6 Capsicum annuum HOM05D003513 ORTHO05D004660 8.6e-18 95.1 179 38.5
A08p11320 Brassica napus HOM05D003513 ORTHO05D004660 4.2e-17 92.8 58 81.0
A10p16400 Brassica napus HOM05D003513 ORTHO05D004660 4.2e-17 92.8 58 81.0
C06p15560 Brassica napus HOM05D003513 ORTHO05D004660 4.2e-17 92.8 58 81.0
C08p23080 Brassica napus HOM05D003513 ORTHO05D004660 4.2e-17 92.8 58 81.0
A09p33590 Brassica napus HOM05D003513 ORTHO05D004660 2.1e-16 90.5 56 82.1
C06p18710 Brassica napus HOM05D003513 ORTHO05D004660 2.1e-16 90.5 58 77.6
BraA03t15374Z Brassica rapa HOM05D003513 ORTHO05D004660 2.1e-16 90.5 199 37.7
A03p61430 Brassica napus HOM05D003513 ORTHO05D004660 3.6e-16 89.7 61 77.0
A03p66860 Brassica napus HOM05D003513 ORTHO05D004660 3.6e-16 89.7 71 63.4
BraA09t38150Z Brassica rapa HOM05D003513 ORTHO05D004660 6.1e-16 89.0 56 80.4
Migut.B00497 Erythranthe guttata HOM05D003513 ORTHO05D004660 2.3e-15 87.0 176 36.4
C01p31670 Brassica napus HOM05D003513 ORTHO05D015800 1.7e-13 80.9 54 75.9
Thhalv10021452m.g Eutrema salsugineum HOM05D003513 ORTHO05D004660 2.2e-13 80.5 179 36.3
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 1.1e-12 78.2 197 36.5
Eucgr.L02047 Eucalyptus grandis HOM05D003513 ORTHO05D004660 1.4e-12 77.8 146 41.8
CARHR105270 Cardamine hirsuta HOM05D003513 ORTHO05D004660 7.0e-12 75.5 181 35.4
C08p46960 Brassica napus HOM05D003513 ORTHO05D013524 3.5e-11 73.2 197 35.5
A05p23280 Brassica napus HOM05D003513 ORTHO05D004660 5.9e-11 72.4 46 78.3
BraA05t21192Z Brassica rapa HOM05D003513 ORTHO05D004660 5.9e-11 72.4 46 78.3
Gohir.A01G179633 Gossypium hirsutum HOM05D003513 ORTHO05D004660 7.8e-11 72.0 51 70.6
TWI59G0638 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 1.0e-10 71.6 101 49.5
Phvul.006G197800 Phaseolus vulgaris HOM05D003513 ORTHO05D004660 2.9e-10 70.1 71 53.5
TPR.G22787 Trifolium pratense HOM05D003513 ORTHO05D004660 3.9e-10 69.7 148 37.2
TAR636G1841 Trochodendron aralioides HOM05D003513 ORTHO05D004660 3.9e-10 69.7 88 53.4
Gorai.002G212100 Gossypium raimondii HOM05D003513 ORTHO05D004660 1.9e-09 67.4 51 68.6
BcaC09g52177 Brassica carinata HOM05D003513 ORTHO05D004660 4.7e-08 62.8 111 42.3
TAR629G1841 Trochodendron aralioides HOM05D003513 ORTHO05D004660 1.2e-06 58.2 58 55.2
BolC1t03102H Brassica oleracea HOM05D003531 ORTHO05D015800 2.0e-06 57.4 38 73.7
Gohir.A10G119000 Gossypium hirsutum HOM05D001046 ORTHO05D005883 5.8e-06 55.8 76 48.7


User provided reference genes

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