Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03927 Aquilegia oxysepala HOM05D003152 ORTHO05D077463 1.9e-86 322.4 155 100.0
Aqoxy5G03922 Aquilegia oxysepala HOM05D003152 ORTHO05D004094 1.5e-27 126.7 124 58.1
Aqoxy1G02009 Aquilegia oxysepala HOM05D003152 ORTHO05D004094 5.8e-27 124.8 115 60.0
Ca_01015_v3 Cicer arietinum L. HOM05D003152 ORTHO05D004094 3.2e-25 119.0 122 54.9
Psat5g306080 Pisum sativum HOM05D003152 ORTHO05D004094 1.2e-24 117.1 122 54.1
Rhsim07G0104900 Rhododendron simsii HOM05D003152 ORTHO05D004094 1.2e-24 117.1 119 52.9
Hund14601 Selenicereus undatus HOM05D003152 ORTHO05D004094 2.7e-24 115.9 113 54.9
Glyma.09G277400 Glycine max HOM05D003152 ORTHO05D004094 1.0e-23 114.0 119 53.8
Glyma.18G211400 Glycine max HOM05D003152 ORTHO05D004094 1.3e-23 113.6 119 53.8
Cfa012769 Carpinus fangiana HOM05D003152 ORTHO05D004094 1.8e-23 113.2 123 51.2
Eucgr.E00458 Eucalyptus grandis HOM05D003152 ORTHO05D004094 3.0e-23 112.5 123 50.4
Lalb_Chr22g0349441 Lupinus albus HOM05D003152 ORTHO05D004094 3.0e-23 112.5 117 53.8
TAR636G2130 Trochodendron aralioides HOM05D003152 ORTHO05D004094 3.0e-23 112.5 122 52.5
CiPaw.11G150900 Carya illinoinensis HOM05D003152 ORTHO05D004094 3.9e-23 112.1 123 52.8
Haze_07861 Corylus avellana HOM05D003152 ORTHO05D004094 3.9e-23 112.1 123 50.4
QL06p053048 Quercus lobata HOM05D003152 ORTHO05D004094 3.9e-23 112.1 121 52.1
VMungo1383G1558 Vigna mungo HOM05D003152 ORTHO05D004094 3.9e-23 112.1 119 53.8
Manes.01G076900 Manihot esculenta HOM05D003152 ORTHO05D004094 5.1e-23 111.7 119 54.6
Peaxi162Scf00516g00327 Petunia axillaris HOM05D003152 ORTHO05D004094 5.1e-23 111.7 119 51.3
CSS0013092 Camellia sinensis var. sinensis HOM05D003152 ORTHO05D004094 6.7e-23 111.3 123 49.6
Oeu002545.1 Olea europaea HOM05D003152 ORTHO05D004094 6.7e-23 111.3 124 52.4
Rhsim03G0143900 Rhododendron simsii HOM05D003152 ORTHO05D004094 6.7e-23 111.3 117 50.4
CANSAT21G0390 Cannabis sativa HOM05D003152 ORTHO05D004094 8.7e-23 110.9 123 52.0
QL12p013407 Quercus lobata HOM05D003152 ORTHO05D004094 8.7e-23 110.9 123 50.4
arahy.Tifrunner.gnm1.ann1.AX7FJG Arachis hypogaea HOM05D003152 ORTHO05D004094 1.1e-22 110.5 122 51.6
ECA233G4900 Erigeron canadensis HOM05D003152 ORTHO05D004094 1.1e-22 110.5 122 50.8
Gohir.D11G025800 Gossypium hirsutum HOM05D003152 ORTHO05D004094 1.1e-22 110.5 126 47.6
Lalb_Chr24g0392881 Lupinus albus HOM05D003152 ORTHO05D004094 1.1e-22 110.5 121 52.1
GSVIVG01001278001 Vitis vinifera HOM05D003152 ORTHO05D004094 1.1e-22 110.5 123 51.2
Gorai.007G028000 Gossypium raimondii HOM05D003152 ORTHO05D004094 1.5e-22 110.2 122 47.5
Sc19g0002810 Simmondsia chinensis HOM05D003152 ORTHO05D004094 1.5e-22 110.2 119 51.3
CiPaw.12G107100 Carya illinoinensis HOM05D003152 ORTHO05D004094 1.9e-22 109.8 119 51.3
arahy.Tifrunner.gnm1.ann1.EZ70MQ Arachis hypogaea HOM05D003152 ORTHO05D004094 2.5e-22 109.4 117 53.0
arahy.Tifrunner.gnm1.ann1.U0ISBZ Arachis hypogaea HOM05D003152 ORTHO05D004094 2.5e-22 109.4 123 50.4
arahy.Tifrunner.gnm1.ann1.UBEE9G Arachis hypogaea HOM05D003152 ORTHO05D004094 2.5e-22 109.4 117 53.0
Phvul.008G086600 Phaseolus vulgaris HOM05D003152 ORTHO05D004094 2.5e-22 109.4 119 52.1
Thecc.03G256500 Theobroma cacao HOM05D003152 ORTHO05D004094 2.5e-22 109.4 119 51.3
TPR.G19173 Trifolium pratense HOM05D003152 ORTHO05D004094 2.5e-22 109.4 120 51.7
Cpa.g.sc29.131 Carica papaya HOM05D003152 ORTHO05D004094 3.3e-22 109.0 119 50.4
AUR62039936 Chenopodium quinoa HOM05D003152 ORTHO05D004094 3.3e-22 109.0 117 50.4
MELO3C005558.2 Cucumis melo HOM05D003152 ORTHO05D004094 3.3e-22 109.0 119 51.3
Lsat_1_v5_gn_6_1880 Lactuca sativa HOM05D003152 ORTHO05D004094 3.3e-22 109.0 117 53.0
Potri.001G120900 Populus trichocarpa HOM05D003152 ORTHO05D004094 3.3e-22 109.0 121 51.2
TAR629G0380 Trochodendron aralioides HOM05D003152 ORTHO05D004094 3.3e-22 109.0 122 51.6
DCAR_008467 Daucus carota HOM05D003152 ORTHO05D004094 4.3e-22 108.6 112 52.7
Gohir.A11G026500 Gossypium hirsutum HOM05D003152 ORTHO05D004094 4.3e-22 108.6 126 46.8
HanXRQChr02g0049441 Helianthus annuus HOM05D003152 ORTHO05D004094 4.3e-22 108.6 117 53.0
GSVIVG01004779001 Vitis vinifera HOM05D003152 ORTHO05D004094 4.3e-22 108.6 123 50.4
Cc06_g13250 Coffea canephora HOM05D003152 ORTHO05D004094 5.7e-22 108.2 123 51.2
CsaV3_5G003990 Cucumis sativus L. HOM05D003152 ORTHO05D004094 5.7e-22 108.2 119 51.3
Gohir.D09G190200 Gossypium hirsutum HOM05D003152 ORTHO05D004094 5.7e-22 108.2 117 50.4
Gorai.006G212800 Gossypium raimondii HOM05D003152 ORTHO05D004094 5.7e-22 108.2 117 50.4
Oeu056513.1 Olea europaea HOM05D003152 ORTHO05D004094 5.7e-22 108.2 119 52.1
Sabra01G0093100 Salix brachista HOM05D003152 ORTHO05D004094 5.7e-22 108.2 117 52.1
Sed0001437 Sechium edule HOM05D003152 ORTHO05D004094 5.7e-22 108.2 117 51.3
ClCG01G003860 Citrullus lanatus HOM05D003152 ORTHO05D004094 7.4e-22 107.8 119 50.4
DCAR_027796 Daucus carota HOM05D003152 ORTHO05D004094 7.4e-22 107.8 118 50.8
Hma1.2p1_1414F.1_g281900 Hydrangea macrophylla HOM05D003152 ORTHO05D004094 7.4e-22 107.8 118 51.7
Nn8g39222 Nelumbo nucifera HOM05D003152 ORTHO05D004094 7.4e-22 107.8 122 50.0
PSO063G1414 Papaver somniferum HOM05D003152 ORTHO05D004094 7.4e-22 107.8 115 52.2
Prupe.5G075100 Prunus persica HOM05D003152 ORTHO05D004094 7.4e-22 107.8 121 50.4
CSS0031797 Camellia sinensis var. sinensis HOM05D003152 ORTHO05D004094 9.6e-22 107.5 123 48.8
DCAR_018049 Daucus carota HOM05D003152 ORTHO05D002674 9.6e-22 107.5 118 50.0
MSTRG.19706 Avicennia marina HOM05D003152 ORTHO05D004094 1.3e-21 107.1 122 47.5
Lalb_Chr25g0278851 Lupinus albus HOM05D003152 ORTHO05D004094 1.3e-21 107.1 111 52.3
Oeu009849.2 Olea europaea HOM05D003152 ORTHO05D004094 1.3e-21 107.1 123 50.4
PSO782G4661 Papaver somniferum HOM05D003152 ORTHO05D004094 1.3e-21 107.1 115 52.2
Actinidia02109 Actinidia chinensis HOM05D003152 ORTHO05D004094 1.6e-21 106.7 123 48.0
Actinidia27454 Actinidia chinensis HOM05D003152 ORTHO05D004094 1.6e-21 106.7 123 48.8
Aa31LG2G230 Aethionema arabicum HOM05D003152 ORTHO05D004094 1.6e-21 106.7 120 50.0
COL.COLO4_37209 Corchorus olitorius HOM05D003152 ORTHO05D004094 2.1e-21 106.3 124 48.4
Gohir.A09G195600 Gossypium hirsutum HOM05D003152 ORTHO05D004094 2.1e-21 106.3 117 49.6
Lj3g0024855 Lotus japonicus HOM05D003152 ORTHO05D004094 2.1e-21 106.3 117 53.0
Medtr2g105100 Medicago truncatula HOM05D003152 ORTHO05D004094 2.1e-21 106.3 120 50.0
AL2G13230 Arabidopsis lyrata HOM05D003152 ORTHO05D004094 2.8e-21 105.9 121 50.4
AT1G62640 Arabidopsis thaliana HOM05D003152 ORTHO05D004094 2.8e-21 105.9 121 50.4
Carub.0002s0233 Capsella rubella HOM05D003152 ORTHO05D004094 2.8e-21 105.9 121 50.4
CARHR049250 Cardamine hirsuta HOM05D003152 ORTHO05D004094 2.8e-21 105.9 121 50.4
FAN04G1135 Fragaria x ananassa HOM05D003152 ORTHO05D004094 2.8e-21 105.9 121 50.4
SalBow6G1354 Salvia bowleyana HOM05D003152 ORTHO05D004094 2.8e-21 105.9 121 48.8
TWI60G0644 Tripterygium wilfordii HOM05D003152 ORTHO05D004094 2.8e-21 105.9 119 50.4
TWI81G1045 Tripterygium wilfordii HOM05D003152 ORTHO05D004094 3.7e-21 105.5 119 50.4
vmacro14103 Vaccinium macrocarpon HOM05D003152 ORTHO05D004094 3.7e-21 105.5 119 48.7
AUR62007480 Chenopodium quinoa HOM05D003152 ORTHO05D004094 4.8e-21 105.1 127 46.5
Migut.J01479 Erythranthe guttata HOM05D003152 ORTHO05D004094 4.8e-21 105.1 121 48.8
Lsat_1_v5_gn_6_109081 Lactuca sativa HOM05D003152 ORTHO05D004094 4.8e-21 105.1 117 47.0
RcHm_v2.0_Chr7g0202391 Rosa chinensis HOM05D003152 ORTHO05D004094 4.8e-21 105.1 121 50.4
THA.LOC104823549 Tarenaya hassleriana HOM05D003152 ORTHO05D004094 4.8e-21 105.1 121 48.8
Atru.chr9.1375 Acer truncatum HOM05D003152 ORTHO05D004094 6.2e-21 104.8 121 50.4
CAN.G732.11 Capsicum annuum HOM05D003152 ORTHO05D004094 6.2e-21 104.8 146 45.2
Duzib068G0523 Durio zibethinus HOM05D003152 ORTHO05D004094 6.2e-21 104.8 119 50.4
Duzib084G0469 Durio zibethinus HOM05D003152 ORTHO05D004094 6.2e-21 104.8 117 50.4
Manes.02G036200 Manihot esculenta HOM05D003152 ORTHO05D004094 6.2e-21 104.8 119 48.7
FAN13G2916 Fragaria x ananassa HOM05D003152 ORTHO05D004094 8.2e-21 104.4 121 49.6
PSO170G2789 Papaver somniferum HOM05D003152 ORTHO05D004094 8.2e-21 104.4 123 48.0
PGR042G2869 Punica granatum HOM05D003152 ORTHO05D004094 8.2e-21 104.4 121 48.8
EL10Ac5g13014 Beta vulgaris HOM05D003152 ORTHO05D004094 1.1e-20 104.0 112 50.9
Dinv39108 Davidia involucrata HOM05D003152 ORTHO05D004094 1.1e-20 104.0 123 45.5
ECA246G1886 Erigeron canadensis HOM05D003152 ORTHO05D004094 1.1e-20 104.0 118 47.5
FvH4_5g00250 Fragaria vesca HOM05D003152 ORTHO05D004094 1.1e-20 104.0 121 49.6
FAN18G0254 Fragaria x ananassa HOM05D003152 ORTHO05D004094 1.1e-20 104.0 121 49.6
PSO017G6794 Papaver somniferum HOM05D003152 ORTHO05D004094 1.1e-20 104.0 117 48.7
MSTRG.26221 Avicennia marina HOM05D003152 ORTHO05D004094 1.4e-20 103.6 123 48.0
MD09G1022600 Malus domestica HOM05D003152 ORTHO05D004094 1.4e-20 103.6 121 48.8
Solyc03g097470.3 Solanum lycopersicum HOM05D003152 ORTHO05D004094 1.4e-20 103.6 118 49.2
SGA_v2.0_scaffold66G22451 Striga asiatica HOM05D003152 ORTHO05D020396 1.4e-20 103.6 115 50.4
BraA09t36961Z Brassica rapa HOM05D003152 ORTHO05D004094 1.8e-20 103.2 121 49.6
Ciclev10020462m.g Citrus clementina HOM05D003152 ORTHO05D004094 1.8e-20 103.2 121 47.9
Lj8C337T1 Lonicera japonica HOM05D003152 ORTHO05D004094 1.8e-20 103.2 119 48.7
MD08G1135900 Malus domestica HOM05D003152 ORTHO05D004094 1.8e-20 103.2 121 48.8
BcaB07g31342 Brassica carinata HOM05D003152 ORTHO05D004094 2.4e-20 102.8 121 49.6
SalBow1G3248 Salvia bowleyana HOM05D003152 ORTHO05D004094 2.4e-20 102.8 110 48.2
BcaC04g22425 Brassica carinata HOM05D003152 ORTHO05D004094 3.1e-20 102.4 121 49.6
A09p16150 Brassica napus HOM05D003152 ORTHO05D004094 3.1e-20 102.4 121 49.6
C09p19490 Brassica napus HOM05D003152 ORTHO05D004094 3.1e-20 102.4 121 49.6
BolC9t54852H Brassica oleracea HOM05D003152 ORTHO05D004094 3.1e-20 102.4 121 49.6
BraA09t37250Z Brassica rapa HOM05D003152 ORTHO05D004094 3.1e-20 102.4 121 49.6
Thhalv10023499m.g Eutrema salsugineum HOM05D003152 ORTHO05D004094 3.1e-20 102.4 121 50.4
HanXRQChr05g0148701 Helianthus annuus HOM05D003152 ORTHO05D004094 3.1e-20 102.4 121 47.9
MD12G1033000 Malus domestica HOM05D003152 ORTHO05D004094 3.1e-20 102.4 121 47.9
AUR62011765 Chenopodium quinoa HOM05D003152 ORTHO05D004094 4.0e-20 102.1 117 49.6
Ca_20540_v3 Cicer arietinum L. HOM05D003152 ORTHO05D004094 6.9e-20 101.3 114 47.4
Lj8C258T8 Lonicera japonica HOM05D003152 ORTHO05D004094 6.9e-20 101.3 117 47.9
SHI20570 Sapria himalayana HOM05D003152 ORTHO05D004094 6.9e-20 101.3 119 50.4
BolC9t54465H Brassica oleracea HOM05D003152 ORTHO05D004094 9.0e-20 100.9 121 49.6
unitig_21.g20649 Utricularia gibba HOM05D003152 ORTHO05D004094 9.0e-20 100.9 116 49.1
Medtr4g007180 Medicago truncatula HOM05D003152 ORTHO05D004094 1.2e-19 100.5 120 46.7
Sopen03g028240 Solanum pennellii HOM05D003152 ORTHO05D004094 1.2e-19 100.5 118 48.3
Ah.02g115360 Amaranthus hybridus HOM05D003152 ORTHO05D004094 1.5e-19 100.1 116 47.4
HanXRQChr17g0550351 Helianthus annuus HOM05D003152 ORTHO05D004094 1.5e-19 100.1 117 49.6
Sp2g02000 Schrenkiella parvula HOM05D003152 ORTHO05D004094 1.5e-19 100.1 117 49.6
CAN.G285.10 Capsicum annuum HOM05D003152 ORTHO05D004094 2.0e-19 99.8 132 45.5
Nn2g11781 Nelumbo nucifera HOM05D003152 ORTHO05D004094 2.0e-19 99.8 119 47.9
Dinv21605 Davidia involucrata HOM05D003152 ORTHO05D004094 2.6e-19 99.4 119 47.1
Nitab4.5_0001108g0030 Nicotiana tabacum HOM05D003152 ORTHO05D004094 2.6e-19 99.4 133 43.6
SGA_v2.0_scaffold69G23257 Striga asiatica HOM05D003152 ORTHO05D004094 3.4e-19 99.0 121 46.3
BcaC04g22757 Brassica carinata HOM05D003152 ORTHO05D004094 4.5e-19 98.6 121 48.8
C09p15600 Brassica napus HOM05D003152 ORTHO05D004094 4.5e-19 98.6 121 48.8
ATR0001G047 Amborella trichopoda HOM05D003152 ORTHO05D004094 7.6e-19 97.8 120 45.8
Lalb_Chr00c36g0408821 Lupinus albus HOM05D003152 ORTHO05D004094 1.0e-18 97.4 119 49.6
MBI11_g24608_MAGBIO Magnolia biondii HOM05D003152 ORTHO05D004094 1.0e-18 97.4 118 45.8
MBI03_g12759_MAGBIO Magnolia biondii HOM05D003152 ORTHO05D004094 1.3e-18 97.1 118 45.8
Ah.12g062230 Amaranthus hybridus HOM05D003152 ORTHO05D004094 1.7e-18 96.7 119 45.4
AUR62024611 Chenopodium quinoa HOM05D003152 ORTHO05D004094 2.2e-18 96.3 117 47.9
MD04G1085000 Malus domestica HOM05D003152 ORTHO05D004094 2.2e-18 96.3 125 45.6
Peaxi162Scf00909g00014 Petunia axillaris HOM05D003152 ORTHO05D004094 1.9e-17 93.2 108 46.3
Peaxi162Scf00133g00053 Petunia axillaris HOM05D003152 ORTHO05D004094 4.2e-17 92.0 114 46.5
Sopen08g002520 Solanum pennellii HOM05D003152 ORTHO05D004094 4.2e-17 92.0 117 43.6
Solyc08g006560.3 Solanum lycopersicum HOM05D003152 ORTHO05D004094 5.5e-17 91.7 117 43.6
Peaxi162Scf00909g00216 Petunia axillaris HOM05D003152 ORTHO05D004094 7.1e-17 91.3 114 43.9
Peaxi162Scf03529g00006 Petunia axillaris HOM05D003152 ORTHO05D004094 7.1e-17 91.3 108 46.3
AagrBONN_evm.TU.Sc2ySwM_117.2850 Anthoceros agrestis HOM05D003152 ORTHO05D004094 1.2e-16 90.5 117 45.3
Pp3c11_14950 Physcomitrium patens HOM05D003152 ORTHO05D004094 1.2e-16 90.5 115 47.0
Os04g0643300 Oryza sativa ssp. japonica HOM05D003152 ORTHO05D004094 2.1e-16 89.7 114 43.9
Peaxi162Scf01440g00024 Petunia axillaris HOM05D003152 ORTHO05D004094 2.1e-16 89.7 116 44.0
Pp3c7_10260 Physcomitrium patens HOM05D003152 ORTHO05D004094 2.1e-16 89.7 115 47.0
PGSC0003DMG400026308 Solanum tuberosum HOM05D003152 ORTHO05D004094 2.1e-16 89.7 117 41.9
Peaxi162Scf01440g00026 Petunia axillaris HOM05D003152 ORTHO05D004094 3.5e-16 89.0 108 45.4
Nitab4.5_0000011g0260 Nicotiana tabacum HOM05D003152 ORTHO05D004094 4.6e-16 88.6 124 41.9
Mapoly0040s0081 Marchantia polymorpha HOM05D003152 ORTHO05D004094 7.9e-16 87.8 129 42.6
Pp3c2_25970 Physcomitrium patens HOM05D003152 ORTHO05D004094 7.9e-16 87.8 115 45.2
Peaxi162Scf02044g00011 Petunia axillaris HOM05D003152 ORTHO05D020396 1.0e-15 87.4 110 43.6
CBR_g30012 Chara braunii HOM05D003152 ORTHO05D004094 5.1e-15 85.1 111 42.3
Peaxi162Scf00133g00016 Petunia axillaris HOM05D003152 ORTHO05D004094 5.1e-15 85.1 108 43.5
Zm00001eb068760 Zea mays HOM05D003152 ORTHO05D004094 8.7e-15 84.3 111 40.5
Zm00001eb431950 Zea mays HOM05D003152 ORTHO05D004094 8.7e-15 84.3 111 40.5
SMO270G0022 Selaginella moellendorffii HOM05D003152 ORTHO05D004094 3.3e-14 82.4 115 41.7
HPP92_013054 Vanilla planifolia HOM05D003152 ORTHO05D004094 4.3e-14 82.0 117 41.9
HPP92_013064 Vanilla planifolia HOM05D003152 ORTHO05D004094 4.3e-14 82.0 117 41.9
Peaxi162Scf01440g00025 Petunia axillaris HOM05D003152 ORTHO05D020396 7.4e-14 81.3 113 44.2
THA.LOC104809460 Tarenaya hassleriana HOM05D003152 ORTHO05D004094 1.5e-11 73.6 120 40.0
FAN08G1487 Fragaria x ananassa HOM05D003152 ORTHO05D004094 4.5e-11 72.0 131 38.9
MCO03G154 Micromonas commoda HOM05D003152 ORTHO05D004094 2.9e-10 69.3 103 40.8
Cre04.g216950 Chlamydomonas reinhardtii HOM05D003152 ORTHO05D004094 8.5e-10 67.8 106 37.7
vmacro06967 Vaccinium macrocarpon HOM05D003152 ORTHO05D004094 1.1e-09 67.4 46 69.6
arahy.Tifrunner.gnm1.ann1.F63DWU Arachis hypogaea HOM05D003152 ORTHO05D031617 1.4e-09 67.0 60 60.0
PRCOL_00000872 Prasinoderma coloniale HOM05D003152 ORTHO05D004094 4.2e-09 65.5 96 38.5
HanXRQChr13g0394971 Helianthus annuus HOM05D003152 ORTHO05D020396 9.4e-09 64.3 83 44.6
Peaxi162Scf00133g00411 Petunia axillaris HOM05D003152 ORTHO05D020396 1.6e-08 63.5 106 37.7
Peaxi162Scf00133g00527 Petunia axillaris HOM05D003152 ORTHO05D004094 3.0e-07 59.3 80 43.8
Nitab4.5_0004670g0040 Nicotiana tabacum HOM05D003152 ORTHO05D004094 5.1e-07 58.5 46 58.7
Lsat_1_v5_gn_3_2160 Lactuca sativa HOM05D003152 ORTHO05D004094 8.8e-07 57.8 46 58.7
Nitab4.5_0000021g1070 Nicotiana tabacum HOM05D003152 ORTHO05D004094 2.5e-06 56.2 45 57.8
CDE09G1100 Ceratophyllum demersum HOM05D003152 ORTHO05D020396 3.3e-06 55.8 42 57.1


User provided reference genes

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