Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 4.4e-211 737.6 362 100.0
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 3.2e-92 342.8 391 49.4
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.7e-90 337.0 417 44.1
Aqoxy4G01549 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 8.4e-85 318.2 187 87.2
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 6.7e-74 282.0 396 40.9
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 8.2e-72 275.0 405 40.2
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 1.9e-68 263.8 417 37.6
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 4.2e-68 262.7 136 91.2
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 1.2e-67 261.2 414 36.7
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 2.1e-67 260.4 368 37.8
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 1.8e-66 257.3 370 38.9
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 1.8e-66 257.3 433 35.1
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.9e-65 253.8 368 41.3
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 1.9e-65 253.8 367 40.6
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 5.7e-65 252.3 383 37.9
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 5.7e-65 252.3 421 35.4
Aqoxy91s001 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.7e-61 240.7 120 99.2
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 2.7e-59 233.4 401 34.9
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 3.6e-59 233.0 363 37.7
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 1.3e-58 231.1 362 36.7
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 1.3e-58 231.1 380 38.7
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 8.8e-58 228.4 424 33.7
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 1.1e-57 228.0 395 35.4
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 2.5e-57 226.9 382 35.6
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 2.5e-57 226.9 368 36.1
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 4.3e-57 226.1 406 33.5
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 7.4e-57 225.3 392 33.9
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 7.4e-57 225.3 387 34.1
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 3.7e-56 223.0 406 33.0
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 5.3e-55 219.2 373 35.4
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 5.3e-55 219.2 390 35.1
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 1.2e-54 218.0 393 33.3
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 2.6e-54 216.9 391 32.7
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 5.9e-54 215.7 386 34.2
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 7.7e-54 215.3 363 34.7
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 1.0e-53 214.9 393 32.3
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 2.2e-53 213.8 386 32.4
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 2.9e-53 213.4 403 34.0
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.8e-53 213.0 394 35.0
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 5.0e-53 212.6 394 35.3
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 6.5e-53 212.2 333 39.3
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.1e-52 211.5 430 31.2
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 2.5e-52 210.3 398 33.7
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 2.5e-52 210.3 380 35.8
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 2.5e-52 210.3 382 35.6
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 3.2e-52 209.9 426 31.2
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 5.5e-52 209.1 399 33.1
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 7.2e-52 208.8 380 34.2
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 7.2e-52 208.8 430 30.9
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 9.4e-52 208.4 430 30.9
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 9.4e-52 208.4 306 36.6
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.6e-51 207.6 382 33.8
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 2.7e-51 206.8 394 33.0
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 2.7e-51 206.8 385 34.0
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 4.7e-51 206.1 392 32.9
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 4.7e-51 206.1 388 32.0
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 6.1e-51 205.7 389 33.4
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 1.4e-50 204.5 398 32.2
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 2.3e-50 203.8 420 29.8
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.0e-50 203.4 389 33.7
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 3.9e-50 203.0 401 30.7
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 5.1e-50 202.6 397 31.5
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 6.7e-50 202.2 396 33.8
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 6.7e-50 202.2 368 34.5
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 1.1e-49 201.4 389 32.4
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 1.5e-49 201.1 386 34.5
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 2.0e-49 200.7 398 31.9
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 2.0e-49 200.7 398 31.9
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 2.6e-49 200.3 316 36.7
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 2.6e-49 200.3 436 31.0
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 5.7e-49 199.1 388 32.2
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 3.7e-48 196.4 389 33.2
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 4.8e-48 196.1 388 32.5
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 6.3e-48 195.7 389 33.9
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 8.2e-48 195.3 397 32.2
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 8.2e-48 195.3 397 32.2
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.8e-47 194.1 397 32.0
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 9.1e-47 191.8 358 35.2
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 2.0e-46 190.7 370 32.7
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 2.6e-46 190.3 416 31.5
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 1.0e-45 188.3 415 32.8
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 1.7e-45 187.6 398 32.2
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.7e-45 187.6 301 35.9
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 2.2e-45 187.2 380 30.8
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 3.8e-45 186.4 414 31.9
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 1.1e-44 184.9 389 32.4
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 1.4e-44 184.5 416 30.5
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 1.9e-44 184.1 352 33.5
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 2.5e-44 183.7 399 32.1
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 2.5e-44 183.7 328 34.1
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.2e-44 182.2 401 30.9
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 9.4e-44 181.8 404 30.0
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 9.4e-44 181.8 331 32.9
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 1.2e-43 181.4 411 30.4
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 5.2e-42 176.0 310 33.9
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 1.1e-41 174.9 346 32.1
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 1.1e-41 174.9 321 33.0
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 9.7e-41 171.8 326 32.8
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.7e-40 171.0 318 34.3
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 3.7e-40 169.9 356 32.0
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 1.2e-38 164.9 380 30.8
Dinv21311 Davidia involucrata HOM05D003575 ORTHO05D003587 1.3e-37 161.4 177 43.5
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.5e-37 159.1 347 29.7
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.5e-36 156.0 365 29.3
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 7.2e-36 155.6 369 30.1
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 7.2e-36 155.6 552 23.6
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 3.1e-31 140.2 345 29.0
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 1.0e-29 135.2 176 42.0
Medtr3g082740 Medicago truncatula HOM05D003575 ORTHO05D003587 2.9e-29 133.7 280 29.6
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 4.2e-28 129.8 293 29.4
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 3.6e-27 126.7 166 39.2
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 1.0e-26 125.2 165 39.4
MD09G1128800 Malus domestica HOM05D003575 ORTHO05D003587 6.8e-26 122.5 151 43.7
RcHm_v2.0_Chr2g0155771 Rosa chinensis HOM05D003575 ORTHO05D003587 1.5e-25 121.3 151 41.7
MBI15_g06462_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 9.8e-25 118.6 288 29.9
MBI15_g48140_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 9.8e-25 118.6 113 51.3
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.3e-24 118.2 123 50.4
FAN15G3143 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.2e-24 117.5 160 40.0
FvH4_2g12920 Fragaria vesca HOM05D003575 ORTHO05D003587 2.8e-24 117.1 154 40.9
FAN24G1566 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.8e-24 117.1 154 40.9
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 2.8e-24 117.1 181 37.0
RcHm_v2.0_Chr2g0155791 Rosa chinensis HOM05D003575 ORTHO05D003587 3.7e-24 116.7 159 37.7
FAN20G0397 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.3e-24 115.9 160 39.4
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 6.3e-24 115.9 169 36.1
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 8.3e-24 115.5 176 35.2
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 8.3e-24 115.5 176 35.2
TPR.G40538 Trifolium pratense HOM05D003575 ORTHO05D003587 1.8e-23 114.4 153 42.5
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 3.1e-23 113.6 168 39.3
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 3.1e-23 113.6 176 36.4
Hund01540 Selenicereus undatus HOM05D003575 ORTHO05D003587 4.1e-23 113.2 190 37.4
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.1e-23 112.1 205 32.7
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.5e-22 109.8 173 35.3
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 4.5e-22 109.8 166 38.0
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 5.9e-22 109.4 209 34.4
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 7.7e-22 109.0 166 38.6
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 1.0e-21 108.6 166 38.0
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 2.3e-21 107.5 169 34.9
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 5.0e-21 106.3 172 34.9
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 8.6e-21 105.5 169 34.3
Cc00_g01040 Coffea canephora HOM05D003575 ORTHO05D003587 1.5e-20 104.8 177 35.0
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-20 104.8 166 36.7
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 2.5e-20 104.0 163 35.0
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 4.2e-20 103.2 184 34.2
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 7.2e-20 102.4 164 34.1
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.2e-19 101.7 186 32.8
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 1.6e-19 101.3 201 30.3
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 3.6e-19 100.1 215 34.4
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 4.7e-19 99.8 164 33.5
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 4.7e-19 99.8 164 33.5
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 6.1e-19 99.4 166 35.5
FAN14G3058 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.3e-18 97.4 142 36.6
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 3.0e-18 97.1 166 34.3
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 6.8e-18 95.9 164 33.5
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 6.8e-18 95.9 164 32.9
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 8.9e-18 95.5 170 32.9
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 5.7e-17 92.8 176 33.0
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 9.8e-17 92.0 164 33.5
PSO339G5808 Papaver somniferum HOM05D003575 ORTHO05D003587 3.7e-16 90.1 139 37.4
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 4.9e-16 89.7 108 40.7
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 1.8e-15 87.8 165 32.7
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 5.4e-15 86.3 167 29.3
FAN16G0569 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.6e-14 84.7 208 30.3
FvH4_6g40520 Fragaria vesca HOM05D003575 ORTHO05D003587 2.0e-14 84.3 82 45.1
Pp3c24_6860 Physcomitrium patens HOM05D003575 ORTHO05D003587 2.0e-14 84.3 159 32.1
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 3.5e-14 83.6 121 34.7
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 2.3e-13 80.9 102 41.2
SEGI_27817 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 6.6e-13 79.3 105 41.0
FAN11G0216 Fragaria x ananassa HOM05D003575 ORTHO05D045963 8.6e-13 79.0 97 41.2
FvH4_3g20450 Fragaria vesca HOM05D039614 ORTHO05D045963 1.5e-12 78.2 94 41.5
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 5.6e-12 76.3 98 39.8
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 7.3e-12 75.9 200 29.5
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 1.6e-11 74.7 99 37.4
CAN.G437.9 Capsicum annuum HOM05D003575 ORTHO05D003587 6.1e-11 72.8 97 38.1
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 6.1e-11 72.8 98 34.7
Oeu041110.1 Olea europaea HOM05D003575 ORTHO05D003587 1.4e-10 71.6 130 32.3
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 3.0e-10 70.5 140 29.3
EL10Ac6g15056 Beta vulgaris HOM05D003575 ORTHO05D003587 8.9e-10 68.9 68 44.1
EL10Ac9g22882 Beta vulgaris HOM05D003575 ORTHO05D003587 3.4e-09 67.0 68 42.6
Dinv26594 Davidia involucrata HOM05D000074 ORTHO05D001293 3.4e-09 67.0 76 44.7
ATR0751G016 Amborella trichopoda HOM05D003575 ORTHO05D003587 6.4e-08 62.8 50 50.0
Atru.chr6.3410 Acer truncatum HOM05D000074 ORTHO05D008782 3.2e-07 60.5 62 48.4
Glyma.15G224002 Glycine max HOM05D003575 ORTHO05D003587 1.2e-06 58.5 72 37.5
SEGI_27516 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 1.2e-06 58.5 83 30.1


User provided reference genes

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