Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 6.5e-168 594.0 298 100.0
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.6e-78 297.0 304 56.9
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 3.0e-64 249.6 306 49.3
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 2.9e-59 233.0 305 50.5
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 3.0e-56 223.0 303 45.5
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 5.2e-56 222.2 301 45.5
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 5.2e-56 222.2 302 44.4
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 8.8e-56 221.5 303 43.6
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 1.1e-55 221.1 292 46.2
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 1.5e-55 220.7 302 42.4
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 1.5e-55 220.7 309 45.3
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 2.6e-55 219.9 302 45.4
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 2.2e-54 216.9 306 43.1
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 3.7e-54 216.1 289 48.8
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 3.1e-53 213.0 313 41.9
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 5.3e-53 212.2 282 44.7
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 7.0e-53 211.8 305 43.9
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 7.0e-53 211.8 309 44.0
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 1.2e-52 211.1 282 42.9
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 4.5e-52 209.1 308 43.8
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 2.2e-51 206.8 332 41.9
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 5.0e-51 205.7 321 43.9
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 1.1e-50 204.5 306 43.8
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 1.2e-49 201.1 327 39.1
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.8e-48 197.2 282 41.8
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 3.0e-48 196.4 283 42.0
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 4.0e-48 196.1 284 44.4
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 4.0e-48 196.1 253 48.6
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 6.8e-48 195.3 326 39.6
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 6.8e-48 195.3 284 43.0
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 1.2e-47 194.5 303 42.9
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 2.6e-47 193.4 302 42.4
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 3.4e-47 193.0 281 44.1
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.4e-45 187.6 339 38.3
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 1.8e-45 187.2 341 38.4
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 2.4e-45 186.8 357 37.3
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 5.4e-45 185.7 331 35.0
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 5.4e-45 185.7 254 40.9
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 9.1e-45 184.9 281 40.6
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 1.2e-44 184.5 324 37.3
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 1.3e-43 181.0 313 41.2
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 2.2e-43 180.3 281 40.2
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 3.8e-43 179.5 302 40.7
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 5.0e-43 179.1 305 39.3
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 1.1e-42 177.9 346 35.0
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 2.1e-41 173.7 316 38.3
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 2.7e-41 173.3 274 38.3
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 6.1e-41 172.2 300 38.3
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 6.1e-41 172.2 300 38.3
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 1.8e-40 170.6 341 34.9
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 1.8e-40 170.6 284 39.4
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 3.0e-40 169.9 304 39.5
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 1.5e-39 167.5 282 39.7
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 7.5e-39 165.2 286 38.5
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 9.8e-39 164.9 298 36.6
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 1.3e-38 164.5 287 41.1
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 3.7e-38 162.9 302 38.1
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.1e-37 161.4 274 40.9
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 5.4e-37 159.1 348 33.6
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 9.2e-37 158.3 364 33.8
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 9.2e-37 158.3 285 39.6
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 3.5e-36 156.4 349 33.0
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 3.5e-36 156.4 375 31.5
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 2.9e-35 153.3 311 36.3
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 6.6e-35 152.1 343 34.1
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 3.3e-34 149.8 266 37.6
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 4.3e-34 149.4 300 36.0
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 1.2e-33 147.9 364 32.4
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 2.1e-33 147.1 232 40.1
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 8.0e-33 145.2 289 33.2
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 6.8e-32 142.1 261 36.8
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 1.2e-31 141.4 212 45.3
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 2.6e-31 140.2 290 34.5
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 2.6e-31 140.2 299 33.8
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 1.7e-30 137.5 384 30.7
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 2.9e-30 136.7 215 37.7
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 6.4e-30 135.6 319 32.0
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 8.3e-30 135.2 292 36.6
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 1.4e-29 134.4 413 28.6
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 1.4e-29 134.4 310 32.3
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 2.4e-29 133.7 156 46.2
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 3.2e-29 133.3 155 45.8
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 5.4e-29 132.5 321 35.2
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 5.4e-29 132.5 326 31.9
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 1.6e-28 131.0 215 37.2
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 7.8e-28 128.6 266 36.5
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 7.8e-28 128.6 335 31.9
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 2.5e-26 123.6 391 29.4
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 3.3e-26 123.2 166 42.8
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 7.3e-26 122.1 211 39.3
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 9.5e-26 121.7 321 33.6
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 2.1e-25 120.6 226 39.4
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 4.7e-25 119.4 424 27.4
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 1.2e-23 114.8 125 52.0
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 5.8e-23 112.5 205 38.5
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 9.8e-23 111.7 240 30.4
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 1.3e-22 111.3 338 32.0
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 2.4e-21 107.1 400 27.8
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 2.4e-21 107.1 309 30.1
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 1.3e-19 101.3 280 31.8
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 5.0e-19 99.4 105 49.5
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 1.9e-18 97.4 134 38.1
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 9.5e-18 95.1 91 52.7
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 3.1e-16 90.1 112 46.4
Atru.chr11.2118 Acer truncatum HOM05D006585 ORTHO05D007798 8.9e-16 88.6 283 30.0
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 8.9e-16 88.6 245 30.2
Atru.chr11.2134 Acer truncatum HOM05D006585 ORTHO05D007798 1.2e-15 88.2 283 30.0
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 1.2e-15 88.2 169 36.7
HPP92_008334 Vanilla planifolia HOM05D034240 ORTHO05D007798 2.0e-15 87.4 204 33.3
SalBow8G2270 Salvia bowleyana HOM05D006585 ORTHO05D007798 1.8e-08 64.3 197 30.5
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 2.6e-07 60.5 54 50.0
Oeu056719.1 Olea europaea HOM05D006585 ORTHO05D007798 7.6e-07 58.9 176 29.5
SHI17755 Sapria himalayana HOM05D006585 ORTHO05D007798 3.8e-06 56.6 163 29.4


User provided reference genes

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