Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 0.0e+00 1159.1 585 100.0
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 1.1e-251 873.2 594 76.1
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 1.6e-250 869.4 595 75.0
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 5.6e-248 860.9 595 74.1
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 1.8e-246 855.9 586 74.2
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 2.4e-246 855.5 586 74.4
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 5.3e-246 854.4 575 75.0
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 5.3e-246 854.4 595 74.5
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 5.3e-246 854.4 592 75.0
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 1.2e-245 853.2 592 74.2
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 4.5e-245 851.3 595 73.9
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 5.8e-245 850.9 598 72.6
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.3e-244 849.7 545 76.1
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 1.3e-244 849.7 589 74.7
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 1.3e-244 849.7 542 78.2
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 1.3e-244 849.7 593 72.7
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.9e-244 848.6 545 76.3
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 1.9e-243 845.9 592 73.6
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 4.2e-243 844.7 593 73.4
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 9.3e-243 843.6 540 78.5
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 2.7e-242 842.0 591 73.3
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 6.0e-242 840.9 598 72.2
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 7.9e-242 840.5 584 73.5
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 7.9e-242 840.5 545 77.1
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 1.0e-241 840.1 583 74.3
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 1.0e-241 840.1 551 76.8
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 1.3e-241 839.7 596 72.8
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 1.3e-241 839.7 584 74.0
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 1.8e-241 839.3 536 77.4
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 2.3e-241 839.0 560 75.7
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 2.3e-241 839.0 520 79.6
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 6.7e-241 837.4 559 76.6
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 8.7e-241 837.0 556 75.9
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 8.7e-241 837.0 590 73.6
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 1.1e-240 836.6 583 72.9
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 7.4e-240 833.9 595 71.8
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 1.3e-239 833.2 634 68.9
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 1.6e-239 832.8 542 76.2
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 2.1e-239 832.4 596 72.1
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 1.1e-238 830.1 540 77.8
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 1.4e-238 829.7 556 75.4
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 9.0e-238 827.0 526 77.0
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 3.4e-237 825.1 590 71.7
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 3.4e-237 825.1 537 76.7
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 2.2e-236 822.4 542 74.7
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 1.1e-235 820.1 562 73.1
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 1.9e-235 819.3 598 68.7
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 2.4e-235 818.9 578 71.1
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.4e-235 818.9 542 75.5
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 2.4e-235 818.9 537 75.2
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 3.2e-235 818.5 597 69.8
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 4.2e-235 818.1 541 74.9
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 4.2e-235 818.1 578 71.8
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 9.3e-235 817.0 598 68.9
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 9.3e-235 817.0 541 74.1
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 9.3e-235 817.0 596 70.8
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 1.2e-234 816.6 543 75.0
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 4.6e-234 814.7 556 74.5
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 6.0e-234 814.3 542 74.0
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 7.9e-234 813.9 542 74.4
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 7.9e-234 813.9 542 74.4
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.0e-233 813.5 552 74.8
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 2.3e-233 812.4 574 73.0
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 3.9e-233 811.6 584 70.9
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 6.7e-233 810.8 537 74.1
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 1.5e-232 809.7 542 74.2
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 1.5e-232 809.7 542 74.2
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 1.5e-232 809.7 597 69.5
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 4.3e-232 808.1 538 74.0
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 7.4e-232 807.4 561 73.1
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 1.3e-231 806.6 554 71.5
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.3e-231 806.6 592 69.4
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 1.1e-230 803.5 527 76.1
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 4.5e-229 798.1 558 72.6
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 2.2e-228 795.8 539 73.5
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 2.2e-228 795.8 569 71.7
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 2.9e-228 795.4 580 71.0
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 4.9e-228 794.7 529 74.7
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.4e-227 793.1 588 69.9
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 1.0e-225 786.9 590 69.8
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 1.3e-223 780.0 538 73.0
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 6.3e-223 777.7 578 70.4
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 8.2e-223 777.3 529 74.9
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 2.4e-222 775.8 520 74.6
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 2.1e-218 762.7 545 71.6
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 3.9e-217 758.4 573 69.3
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 2.8e-215 752.3 521 73.7
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 1.8e-214 749.6 540 72.8
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 6.9e-214 747.7 581 66.8
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 2.5e-211 739.2 518 74.3
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 3.0e-209 732.3 565 67.3
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 6.5e-204 714.5 463 75.6
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 6.5e-204 714.5 505 71.5
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 5.5e-203 711.4 506 73.9
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 1.6e-202 709.9 473 74.2
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 8.0e-202 707.6 473 73.8
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 2.6e-200 702.6 440 78.2
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 6.5e-196 688.0 492 70.5
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.0e-193 680.6 432 78.5
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 1.5e-192 676.8 432 76.9
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 4.4e-192 675.2 576 61.3
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 2.8e-191 672.5 569 64.0
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 2.2e-188 662.9 519 66.9
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 1.2e-184 650.6 545 63.3
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 1.1e-182 644.0 504 64.5
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 7.0e-182 641.3 524 63.7
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 4.7e-178 628.6 381 80.1
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.2e-170 604.0 505 61.6
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 4.4e-160 568.9 446 64.6
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 1.2e-157 560.8 391 74.9
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 6.0e-117 425.6 323 62.8
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-89 334.7 256 65.6
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.7e-88 328.9 200 78.0
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 7.0e-65 252.7 274 50.0
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-53 214.9 234 49.6
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 2.4e-49 201.1 141 69.5
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 1.1e-44 185.7 140 67.1
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 5.6e-38 163.3 100 76.0
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 4.1e-33 147.1 102 65.7
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 7.8e-32 142.9 103 65.0
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 2.4e-25 121.3 65 84.6
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.9e-22 111.7 135 47.4
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 3.6e-21 107.5 66 71.2
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 6.2e-21 106.7 76 64.5
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 1.5e-19 102.1 74 64.9
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 1.9e-17 95.1 65 67.7
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 1.9e-17 95.1 65 67.7
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 3.5e-16 90.9 68 61.8
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 3.5e-16 90.9 68 61.8
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 4.6e-16 90.5 67 64.2
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 3.9e-15 87.4 95 51.6
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 5.6e-14 83.6 54 72.2
SEGI_38231 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 3.9e-07 60.8 54 57.4
Actinidia08142 Actinidia chinensis HOM05D005895 ORTHO05D026310 3.3e-06 57.8 131 38.9
CDE06G1756 Ceratophyllum demersum HOM05D005895 ORTHO05D007916 7.4e-06 56.6 104 36.5


User provided reference genes

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