Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03757 Aquilegia oxysepala HOM05D008378 ORTHO05D010346 3.7e-56 221.5 126 100.0
TWI14G0631 Tripterygium wilfordii HOM05D008378 ORTHO05D010346 3.6e-11 72.0 69 59.4
ECA247G3718 Erigeron canadensis HOM05D000048 ORTHO05D000207 4.8e-11 71.6 69 56.5
Dinv38528 Davidia involucrata HOM05D008378 ORTHO05D010346 6.2e-11 71.2 99 51.5
QL10p006910 Quercus lobata HOM05D008378 ORTHO05D010346 1.1e-10 70.5 86 50.0
CsaV3_1G001040 Cucumis sativus L. HOM05D000048 ORTHO05D010346 1.4e-10 70.1 123 38.2
ClCG06G017410 Citrullus lanatus HOM05D008378 ORTHO05D010346 3.1e-10 68.9 80 51.2
MELO3C029768.2 Cucumis melo HOM05D008378 ORTHO05D010346 3.1e-10 68.9 80 52.5
Sed0014985 Sechium edule HOM05D008378 ORTHO05D010346 3.1e-10 68.9 123 38.2
Rhsim08G0177400 Rhododendron simsii HOM05D008378 ORTHO05D010346 5.3e-10 68.2 89 48.3
vmacro19302 Vaccinium macrocarpon HOM05D008378 ORTHO05D010346 5.3e-10 68.2 109 44.0
RcHm_v2.0_Chr6g0249651 Rosa chinensis HOM05D008378 ORTHO05D010346 1.2e-09 67.0 110 43.6
MSTRG.23165 Avicennia marina HOM05D008378 ORTHO05D010346 1.5e-09 66.6 78 50.0
Hma1.2p1_0046F.1_g027100 Hydrangea macrophylla HOM05D003772 ORTHO05D010346 1.5e-09 66.6 61 57.4
PSO754G0065 Papaver somniferum HOM05D008378 ORTHO05D010346 1.5e-09 66.6 85 51.8
Haze_07583 Corylus avellana HOM05D008378 ORTHO05D010346 2.0e-09 66.2 121 41.3
Migut.D01994 Erythranthe guttata HOM05D008378 ORTHO05D010346 3.4e-09 65.5 74 52.7
HanXRQChr02g0035801 Helianthus annuus HOM05D008378 ORTHO05D010346 4.5e-09 65.1 84 42.9
Prupe.8G004000 Prunus persica HOM05D008378 ORTHO05D010346 4.5e-09 65.1 90 46.7
Cfa019213 Carpinus fangiana HOM05D008378 ORTHO05D010346 7.6e-09 64.3 108 44.4
Lsat_1_v5_gn_1_27801 Lactuca sativa HOM05D000048 ORTHO05D000207 2.2e-08 62.8 70 51.4
PGR083G1326 Punica granatum HOM05D008378 ORTHO05D010346 2.2e-08 62.8 119 41.2
Atru.chr9.2574 Acer truncatum HOM05D003157 ORTHO05D004447 3.8e-08 62.0 48 66.7
Manes.06G110000 Manihot esculenta HOM05D008378 ORTHO05D010346 3.8e-08 62.0 86 45.3
SalBow6G1615 Salvia bowleyana HOM05D008378 ORTHO05D010346 3.8e-08 62.0 116 38.8
CiPaw.11G020600 Carya illinoinensis HOM05D008378 ORTHO05D010346 8.4e-08 60.8 89 41.6
Dinv16953 Davidia involucrata HOM05D008378 ORTHO05D010346 1.4e-07 60.1 88 52.3
Lj4g0016291 Lotus japonicus HOM05D020160 ORTHO05D010346 1.4e-07 60.1 84 48.8
TAR624G0900 Trochodendron aralioides HOM05D003772 ORTHO05D004509 1.4e-07 60.1 110 40.0
Cc05_g07210 Coffea canephora HOM05D003772 ORTHO05D004509 1.9e-07 59.7 118 39.8
PGSC0003DMG400027074 Solanum tuberosum HOM05D008378 ORTHO05D010346 1.9e-07 59.7 75 48.0
Dinv26410 Davidia involucrata HOM05D000001 ORTHO05D004509 2.4e-07 59.3 122 41.0
Migut.O00155 Erythranthe guttata HOM05D008378 ORTHO05D010346 2.4e-07 59.3 98 37.8
Lj5A129G68 Lonicera japonica HOM05D003772 ORTHO05D010346 2.4e-07 59.3 78 48.7
Lj8P111T15 Lonicera japonica HOM05D003772 ORTHO05D004509 2.4e-07 59.3 123 39.8
Sabra15G0107100 Salix brachista HOM05D002488 ORTHO05D002613 2.4e-07 59.3 92 45.7
Aqoxy1G02411 Aquilegia oxysepala HOM05D003772 ORTHO05D004509 3.2e-07 58.9 119 42.0
SalBow5G0298 Salvia bowleyana HOM05D008378 ORTHO05D010346 4.2e-07 58.5 105 39.0
TAR629G1107 Trochodendron aralioides HOM05D003772 ORTHO05D004509 4.2e-07 58.5 120 38.3
CAN.G248.1 Capsicum annuum HOM05D003772 ORTHO05D004509 5.5e-07 58.2 111 36.9
Lsat_1_v5_gn_4_66640 Lactuca sativa HOM05D003772 ORTHO05D004509 5.5e-07 58.2 121 37.2
SalBow5G3471 Salvia bowleyana HOM05D008378 ORTHO05D010346 5.5e-07 58.2 105 38.1
Solyc06g071760.1 Solanum lycopersicum HOM05D008378 ORTHO05D010346 5.5e-07 58.2 75 48.0
Sopen06g028050 Solanum pennellii HOM05D008378 ORTHO05D010346 5.5e-07 58.2 58 51.7
Potri.015G083900 Populus trichocarpa HOM05D008378 ORTHO05D010346 7.1e-07 57.8 85 43.5
THA.LOC104809774 Tarenaya hassleriana HOM05D008378 ORTHO05D010346 7.1e-07 57.8 62 48.4
TAR626G1598 Trochodendron aralioides HOM05D003772 ORTHO05D004509 7.1e-07 57.8 131 38.9
Nitab4.5_0000003g0800 Nicotiana tabacum HOM05D008378 ORTHO05D010346 1.2e-06 57.0 61 49.2
HanXRQChr05g0130551 Helianthus annuus HOM05D003772 ORTHO05D004509 1.6e-06 56.6 121 38.0
Nitab4.5_0014741g0030 Nicotiana tabacum HOM05D003772 ORTHO05D004509 1.6e-06 56.6 102 41.2
PSO675G9105 Papaver somniferum HOM05D003772 ORTHO05D004509 1.6e-06 56.6 112 38.4
Peaxi162Scf00089g01344 Petunia axillaris HOM05D000048 ORTHO05D000207 1.6e-06 56.6 72 40.3
AUR62008138 Chenopodium quinoa HOM05D008378 ORTHO05D010346 2.1e-06 56.2 92 39.1
AUR62028720 Chenopodium quinoa HOM05D008378 ORTHO05D010346 2.1e-06 56.2 92 43.5
Nn1g04097 Nelumbo nucifera HOM05D003772 ORTHO05D004509 2.1e-06 56.2 126 39.7
CARHR258450 Cardamine hirsuta HOM05D008378 ORTHO05D010346 2.7e-06 55.8 106 40.6
Hma1.2p1_0002F.1_g001920 Hydrangea macrophylla HOM05D003772 ORTHO05D004509 2.7e-06 55.8 122 39.3
MBI06_g33538_MAGBIO Magnolia biondii HOM05D003772 ORTHO05D004509 2.7e-06 55.8 133 38.3
Nitab4.5_0000638g0260 Nicotiana tabacum HOM05D003772 ORTHO05D004509 2.7e-06 55.8 102 41.2
Peaxi162Scf00132g00006 Petunia axillaris HOM05D003772 ORTHO05D004509 2.7e-06 55.8 118 37.3
HPP92_020246 Vanilla planifolia HOM05D003772 ORTHO05D004509 2.7e-06 55.8 126 38.1
Nitab4.5_0013669g0010 Nicotiana tabacum HOM05D008378 ORTHO05D010346 3.5e-06 55.5 81 40.7
DCAR_021247 Daucus carota HOM05D003772 ORTHO05D004509 4.6e-06 55.1 121 40.5
DCAR_021586 Daucus carota HOM05D003772 ORTHO05D004509 4.6e-06 55.1 75 45.3
AT5G50175 Arabidopsis thaliana HOM05D008378 ORTHO05D010346 6.0e-06 54.7 101 35.6
BcaB01g02914 Brassica carinata HOM05D008378 ORTHO05D010346 6.0e-06 54.7 99 38.4
Peaxi162Scf00057g00012 Petunia axillaris HOM05D008378 ORTHO05D010346 6.0e-06 54.7 68 42.6
EL10Ac5g10649 Beta vulgaris HOM05D008378 ORTHO05D010346 7.9e-06 54.3 109 39.4
Carub.0008s1019 Capsella rubella HOM05D008378 ORTHO05D010346 7.9e-06 54.3 102 38.2
Thhalv10015058m.g Eutrema salsugineum HOM05D008378 ORTHO05D010346 7.9e-06 54.3 102 42.2
Solyc07g053930.1 Solanum lycopersicum HOM05D003772 ORTHO05D004509 7.9e-06 54.3 107 43.0


User provided reference genes

Program Settings