Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 0.0e+00 1105.1 635 100.0
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 3.1e-58 230.7 725 32.6
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 2.2e-48 198.0 695 29.5
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 2.9e-48 197.6 689 30.6
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 8.4e-48 196.1 748 28.3
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 1.9e-47 194.9 683 30.0
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 2.1e-46 191.4 685 30.8
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 6.0e-46 189.9 744 28.0
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 3.7e-43 180.6 663 30.0
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 4.8e-43 180.3 473 32.1
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 1.1e-42 179.1 725 30.3
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 1.4e-42 178.7 609 28.9
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 1.4e-42 178.7 695 29.2
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 1.8e-42 178.3 674 29.7
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 1.8e-42 178.3 659 30.3
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 2.4e-42 177.9 681 29.4
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 5.3e-42 176.8 756 28.0
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 1.2e-41 175.6 709 29.3
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 1.2e-41 175.6 743 28.3
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 7.7e-41 172.9 689 28.3
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 1.0e-40 172.6 470 31.7
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 1.0e-40 172.6 632 28.5
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.0e-40 172.6 679 29.9
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 2.2e-40 171.4 667 29.4
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 3.8e-40 170.6 655 28.7
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 5.0e-40 170.2 637 28.1
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 8.5e-40 169.5 742 27.4
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.5e-39 167.9 665 29.5
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 9.4e-39 166.0 672 27.7
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 9.4e-39 166.0 668 29.9
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 9.4e-39 166.0 668 29.9
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 4.6e-38 163.7 720 28.3
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 6.1e-38 163.3 745 28.7
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.0e-37 162.5 627 27.9
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 3.0e-37 161.0 649 29.1
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 5.1e-37 160.2 563 29.1
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 8.8e-37 159.5 686 28.9
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 9.7e-36 156.0 711 28.4
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 3.7e-35 154.1 611 30.1
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 5.3e-34 150.2 655 27.9
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 2.6e-33 147.9 701 28.4
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 4.5e-33 147.1 474 29.3
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 7.7e-33 146.4 463 29.8
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 1.0e-32 146.0 584 27.6
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 1.3e-32 145.6 705 27.8
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.7e-32 145.2 463 29.6
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 2.2e-32 144.8 655 28.2
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 2.9e-32 144.4 598 26.9
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 2.5e-31 141.4 502 29.9
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 2.5e-31 141.4 658 27.4
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 5.5e-31 140.2 499 28.9
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 1.6e-30 138.7 682 29.0
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 4.7e-30 137.1 660 29.7
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 3.0e-29 134.4 501 28.3
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 3.0e-29 134.4 522 28.9
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 8.8e-29 132.9 670 28.7
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 2.0e-28 131.7 635 26.9
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 4.4e-28 130.6 671 28.5
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 5.7e-28 130.2 467 28.7
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 1.7e-27 128.6 468 31.0
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 2.2e-27 128.3 457 28.7
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 6.3e-27 126.7 631 26.1
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 2.4e-26 124.8 694 28.2
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 4.1e-26 124.0 694 30.0
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 7.7e-25 119.8 359 34.8
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 1.0e-24 119.4 382 28.8
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 1.0e-24 119.4 707 25.9
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 5.0e-24 117.1 735 28.0
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 5.0e-24 117.1 732 26.4
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 8.5e-24 116.3 568 26.6
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 1.4e-23 115.5 400 27.8
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 7.2e-23 113.2 705 26.1
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 1.6e-22 112.1 680 27.2
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 4.7e-22 110.5 488 30.9
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.4e-21 109.0 606 27.6
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 3.0e-21 107.8 697 26.4
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 6.7e-21 106.7 333 33.6
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 8.8e-21 106.3 658 25.4
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 7.4e-20 103.2 717 25.4
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 9.7e-20 102.8 321 32.7
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 1.1e-18 99.4 673 25.7
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 1.8e-18 98.6 657 28.3
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 1.8e-18 98.6 708 25.7
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 2.4e-18 98.2 371 29.9
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 5.3e-18 97.1 467 26.1
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 7.0e-18 96.7 121 42.1
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 1.3e-16 92.4 222 36.5
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 1.1e-15 89.4 675 25.3
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 1.1e-15 89.4 504 26.4
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 4.2e-15 87.4 228 35.5
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 2.7e-14 84.7 598 25.4
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 4.7e-14 84.0 227 34.8
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 6.1e-14 83.6 631 24.9
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 3.0e-13 81.3 312 31.4
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 6.8e-13 80.1 687 25.0
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 2.6e-12 78.2 199 32.2
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 5.7e-12 77.0 674 24.8
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 1.7e-11 75.5 239 31.4
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 3.7e-11 74.3 317 31.9
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 7.0e-10 70.1 432 23.1
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 9.1e-10 69.7 420 25.7
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 2.0e-09 68.6 114 36.0
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 2.9e-08 64.7 290 29.3
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 2.9e-08 64.7 111 42.3
SEGI_20190 Sequoiadendron giganteum HOM05D007315 ORTHO05D008940 2.5e-07 61.6 102 44.1
Zm00001eb317370 Zea mays HOM05D019859 ORTHO05D008940 7.2e-07 60.1 99 35.4
Zm00001eb442140 Zea mays HOM05D019859 ORTHO05D008940 7.2e-07 60.1 99 35.4


User provided reference genes

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