Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 2.9e-137 491.9 245 100.0
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 8.4e-137 490.3 245 99.6
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 6.9e-91 337.8 244 66.4
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.0e-89 334.0 252 72.2
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 1.9e-88 329.7 236 66.1
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 1.2e-87 327.0 236 65.3
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 4.4e-85 318.5 244 64.3
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 5.7e-85 318.2 236 64.0
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 3.4e-82 308.9 246 61.0
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 1.4e-78 297.0 245 61.2
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 4.4e-77 292.0 231 58.9
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 4.4e-77 292.0 248 58.1
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 4.4e-77 292.0 242 58.3
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 6.3e-76 288.1 231 58.9
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 2.4e-75 286.2 236 60.6
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 3.1e-75 285.8 243 58.8
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 7.0e-75 284.6 231 58.0
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 9.1e-75 284.3 253 58.1
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 1.2e-74 283.9 242 57.9
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 2.6e-74 282.7 244 56.1
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 2.6e-74 282.7 230 58.3
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 3.5e-74 282.3 247 54.3
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 5.9e-74 281.6 231 58.4
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 7.7e-74 281.2 246 57.7
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 1.0e-73 280.8 249 58.6
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 1.3e-73 280.4 243 59.7
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 3.8e-73 278.9 245 56.7
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 3.8e-73 278.9 231 58.4
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 8.5e-73 277.7 231 60.2
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.9e-72 276.6 237 59.1
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 4.2e-72 275.4 234 59.0
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 3.6e-71 272.3 237 57.8
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 4.7e-71 271.9 237 57.8
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 6.1e-71 271.6 234 56.8
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 2.3e-70 269.6 241 56.0
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 3.0e-70 269.2 234 57.7
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.2e-69 267.3 247 53.4
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 3.3e-69 265.8 231 58.4
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.4e-69 265.4 231 55.0
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 5.7e-69 265.0 237 57.4
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 7.5e-69 264.6 247 56.7
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 9.7e-69 264.2 231 58.0
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 9.7e-69 264.2 239 56.5
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 9.7e-69 264.2 244 54.9
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.7e-68 263.5 247 52.6
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 4.8e-68 261.9 245 55.9
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 6.3e-68 261.5 248 55.2
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 1.1e-67 260.8 231 54.5
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 1.1e-67 260.8 231 56.7
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 3.1e-67 259.2 231 56.3
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 3.1e-67 259.2 247 51.8
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 5.3e-67 258.5 229 57.2
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 5.3e-67 258.5 233 54.1
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 7.0e-67 258.1 248 54.4
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 1.2e-66 257.3 222 58.1
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 1.6e-66 256.9 244 54.1
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 1.6e-66 256.9 231 53.7
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 1.6e-66 256.9 233 54.9
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 3.5e-66 255.8 234 52.6
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 2.2e-65 253.1 234 56.0
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 3.8e-65 252.3 231 53.2
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 5.0e-65 251.9 248 52.8
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 5.0e-65 251.9 231 52.8
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 1.5e-64 250.4 236 52.1
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 1.9e-64 250.0 229 52.8
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 1.9e-64 250.0 233 54.9
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 4.2e-64 248.8 233 54.1
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.7e-63 246.1 232 53.4
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 3.6e-63 245.7 233 51.9
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 8.0e-63 244.6 232 53.9
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 8.0e-63 244.6 231 54.1
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.0e-62 244.2 232 53.0
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 1.8e-62 243.4 234 50.4
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 2.3e-62 243.0 235 50.6
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.0e-62 242.3 232 52.6
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 4.0e-62 242.3 235 50.6
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 4.0e-62 242.3 239 54.4
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 8.8e-62 241.1 232 52.6
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 1.2e-61 240.7 231 51.9
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 2.0e-61 240.0 249 50.2
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 3.4e-61 239.2 236 48.7
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 4.4e-61 238.8 238 51.7
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 1.4e-59 233.8 220 52.3
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.8e-59 233.4 232 51.3
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 4.1e-59 232.3 242 52.1
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 9.1e-59 231.1 235 47.7
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 5.9e-58 228.4 227 50.7
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 3.2e-56 222.6 222 49.5
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 1.5e-53 213.8 248 47.6
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 5.7e-53 211.8 233 47.6
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 1.8e-51 206.8 233 46.4
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 9.2e-51 204.5 233 45.9
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 1.0e-49 201.1 252 46.0
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.0e-49 201.1 243 46.5
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.1e-48 197.6 230 47.8
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.1e-48 197.6 240 47.1
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 1.1e-48 197.6 237 40.9
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 7.3e-48 194.9 230 46.5
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 9.5e-48 194.5 237 45.1
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 9.5e-48 194.5 237 45.1
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 9.5e-48 194.5 237 45.1
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 1.6e-47 193.7 224 41.5
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 3.6e-47 192.6 237 44.7
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 1.4e-46 190.7 224 48.2
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 1.8e-46 190.3 239 45.2
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 1.8e-46 190.3 221 40.7
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 1.8e-46 190.3 233 46.8
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 8.9e-46 188.0 248 43.5
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 5.7e-45 185.3 231 45.9
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 1.7e-44 183.7 180 51.7
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 2.2e-44 183.3 225 46.2
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 1.6e-42 177.2 229 40.6
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 2.5e-40 169.9 235 45.5
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 6.2e-39 165.2 152 55.3
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 2.3e-38 163.3 186 43.0
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 8.9e-38 161.4 243 35.8
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.0e-34 150.2 185 48.1
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 6.6e-33 145.2 104 65.4
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 7.3e-32 141.7 223 35.4
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 3.6e-31 139.4 122 53.3
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 6.2e-31 138.7 169 40.8
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 3.1e-30 136.3 237 37.6
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 1.5e-29 134.0 120 56.7
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 1.4e-27 127.5 220 35.0
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 5.1e-25 119.0 141 49.6
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.1e-25 119.0 119 49.6
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 7.3e-24 115.2 81 56.8
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 3.6e-23 112.8 186 38.2
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 3.1e-22 109.8 212 35.8
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 1.6e-18 97.4 181 34.3
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 1.8e-14 84.0 80 47.5
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 3.1e-14 83.2 71 60.6
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 2.0e-13 80.5 108 43.5
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 3.8e-12 76.3 112 39.3
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 6.4e-12 75.5 97 44.3
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 8.4e-12 75.1 49 73.5
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 1.1e-11 74.7 59 62.7
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 7.1e-11 72.0 71 50.7
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.5e-08 63.5 85 43.5
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 1.4e-06 57.8 74 35.1


User provided reference genes

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