Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 1.0e-70 270.0 140 100.0
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 1.1e-27 127.1 140 55.0
TAR371G0337 Trochodendron aralioides HOM05D007617 ORTHO05D007195 1.3e-25 120.2 140 53.6
Nn3g16639 Nelumbo nucifera HOM05D007617 ORTHO05D007195 1.0e-22 110.5 141 52.5
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 1.9e-21 106.3 142 49.3
Nn4g22527 Nelumbo nucifera HOM05D007617 ORTHO05D007195 9.6e-21 104.0 141 49.6
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 1.6e-20 103.2 139 47.5
TAR622G0315 Trochodendron aralioides HOM05D007617 ORTHO05D007195 1.1e-19 100.5 141 46.8
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 5.3e-19 98.2 142 45.8
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 3.4e-18 95.5 147 49.0
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 1.3e-17 93.6 147 44.2
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 1.7e-17 93.2 140 45.7
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 3.8e-17 92.0 144 46.5
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 4.9e-17 91.7 142 50.7
Dinv33408 Davidia involucrata HOM05D007617 ORTHO05D007195 4.9e-17 91.7 132 47.7
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 8.4e-17 90.9 146 46.6
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 1.1e-16 90.5 148 48.0
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 3.2e-16 89.0 148 48.0
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 4.2e-16 88.6 144 45.1
QL10p005918 Quercus lobata HOM05D007617 ORTHO05D007195 1.6e-15 86.7 140 42.9
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 3.5e-15 85.5 77 70.1
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 3.5e-15 85.5 69 75.4
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 4.6e-15 85.1 142 47.2
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 7.9e-15 84.3 144 47.9
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 7.9e-15 84.3 142 43.0
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 1.8e-14 83.2 143 42.7
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 2.3e-14 82.8 144 47.2
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 3.0e-14 82.4 145 42.1
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 3.9e-14 82.0 153 41.8
Gohir.A07G055100 Gossypium hirsutum HOM05D011792 ORTHO05D007195 5.1e-14 81.6 144 41.7
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 5.1e-14 81.6 142 47.2
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 5.1e-14 81.6 142 42.3
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 6.7e-14 81.3 156 42.9
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 1.9e-13 79.7 145 39.3
EL10As2g23175 Beta vulgaris HOM05D007617 ORTHO05D007195 1.9e-13 79.7 134 41.8
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 3.3e-13 79.0 144 44.4
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 4.3e-13 78.6 141 43.3
Haze_07632 Corylus avellana HOM05D007617 ORTHO05D007195 7.4e-13 77.8 143 40.6
Gorai.001G062900 Gossypium raimondii HOM05D011792 ORTHO05D007195 7.4e-13 77.8 144 41.0
Prupe.5G161500 Prunus persica HOM05D007617 ORTHO05D007195 7.4e-13 77.8 139 41.0
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 1.3e-12 77.0 142 41.5
Gohir.D07G059400 Gossypium hirsutum HOM05D011792 ORTHO05D007195 1.6e-12 76.6 144 40.3
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 2.1e-12 76.3 145 41.4
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 4.8e-12 75.1 130 42.3
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 4.8e-12 75.1 110 51.8
MD02G1049300 Malus domestica HOM05D007617 ORTHO05D007195 6.3e-12 74.7 137 42.3
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 1.1e-11 73.9 136 41.9
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 1.1e-11 73.9 146 41.8
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 1.4e-11 73.6 141 41.1
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.8e-11 73.2 140 40.0
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.8e-11 73.2 140 40.0
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 1.8e-11 73.2 142 40.8
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 2.4e-11 72.8 141 46.8
Duzib205G1108 Durio zibethinus HOM05D011792 ORTHO05D007195 4.1e-11 72.0 148 39.9
Carub.0008s2391 Capsella rubella HOM05D010525 ORTHO05D007195 5.3e-11 71.6 144 41.0
CiPaw.11G014400 Carya illinoinensis HOM05D007617 ORTHO05D007195 5.3e-11 71.6 142 40.1
Cfa007314 Carpinus fangiana HOM05D000615 ORTHO05D007195 1.2e-10 70.5 142 40.8
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.2e-10 70.5 141 42.6
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 1.5e-10 70.1 105 50.5
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 2.0e-10 69.7 140 38.6
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.0e-10 69.7 105 50.5
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.0e-10 69.7 105 50.5
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 2.0e-10 69.7 143 42.0
Haze_14778 Corylus avellana HOM05D007617 ORTHO05D007195 2.6e-10 69.3 134 37.3
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 2.6e-10 69.3 141 41.1
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 2.6e-10 69.3 140 42.1
Atru.chr9.1807 Acer truncatum HOM05D007617 ORTHO05D007195 3.4e-10 68.9 141 39.0
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 3.4e-10 68.9 144 41.7
MELO3C014838.2 Cucumis melo HOM05D007617 ORTHO05D007195 4.5e-10 68.6 141 42.6
Ca_11155_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 1.3e-09 67.0 143 39.2
Ca_11158_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 1.3e-09 67.0 143 39.2
Sp5g13710 Schrenkiella parvula HOM05D010525 ORTHO05D007195 1.3e-09 67.0 147 42.2
Gohir.D12G189700 Gossypium hirsutum HOM05D011792 ORTHO05D007195 1.7e-09 66.6 143 39.2
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 1.7e-09 66.6 163 39.3
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 2.2e-09 66.2 147 44.9
MD14G1167200 Malus domestica HOM05D007617 ORTHO05D007195 2.2e-09 66.2 125 38.4
Sed0015223 Sechium edule HOM05D007617 ORTHO05D007195 2.9e-09 65.9 140 40.7
Lsat_1_v5_gn_3_30061 Lactuca sativa HOM05D007617 ORTHO05D007195 3.8e-09 65.5 140 41.4
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 5.0e-09 65.1 141 41.8
AL8G40240 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 8.5e-09 64.3 148 39.9
BcaB01g00826 Brassica carinata HOM05D010525 ORTHO05D007195 1.4e-08 63.5 141 41.1
CsaV3_3G027400 Cucumis sativus L. HOM05D007617 ORTHO05D007195 1.4e-08 63.5 141 41.1
TWI23G0333 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 1.9e-08 63.2 144 40.3
CARHR276990 Cardamine hirsuta HOM05D010525 ORTHO05D007195 2.5e-08 62.8 148 40.5
Lj2g0010313 Lotus japonicus HOM05D007617 ORTHO05D007195 2.5e-08 62.8 146 39.0
Actinidia36140 Actinidia chinensis HOM05D007617 ORTHO05D007195 4.2e-08 62.0 143 38.5
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 4.2e-08 62.0 69 59.4
Potri.001G340100 Populus trichocarpa HOM05D007617 ORTHO05D007195 5.5e-08 61.6 142 42.3
Aa31LG1G18820 Aethionema arabicum HOM05D010525 ORTHO05D007195 7.2e-08 61.2 147 38.1
Rhsim08G0047600 Rhododendron simsii HOM05D007617 ORTHO05D007195 7.2e-08 61.2 142 36.6
Sc04g0009720 Simmondsia chinensis HOM05D007617 ORTHO05D007195 1.2e-07 60.5 109 42.2
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 1.6e-07 60.1 68 61.8
Hund06047 Selenicereus undatus HOM05D007617 ORTHO05D007195 3.6e-07 58.9 119 37.8
AL5G27740 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 4.6e-07 58.5 141 36.9
CANSAT80G0013 Cannabis sativa HOM05D007617 ORTHO05D007195 4.6e-07 58.5 140 34.3
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 4.6e-07 58.5 136 41.2
BcaC07g39315 Brassica carinata HOM05D010525 ORTHO05D007195 6.1e-07 58.2 144 38.2
C08p23300 Brassica napus HOM05D010525 ORTHO05D007195 6.1e-07 58.2 144 38.2
BolC8t49961H Brassica oleracea HOM05D010525 ORTHO05D007195 6.1e-07 58.2 144 38.2
Thhalv10010898m.g Eutrema salsugineum HOM05D010525 ORTHO05D007195 6.1e-07 58.2 144 34.0
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 7.9e-07 57.8 71 53.5
Gohir.A12G186700 Gossypium hirsutum HOM05D011792 ORTHO05D007195 1.0e-06 57.4 143 37.8
BraA06t25018Z Brassica rapa HOM05D010525 ORTHO05D007195 1.3e-06 57.0 145 40.0
A06p19360 Brassica napus HOM05D010525 ORTHO05D007195 1.8e-06 56.6 143 40.6
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 3.0e-06 55.8 72 55.6
TWI39G0914 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 3.0e-06 55.8 144 38.9
Zm00001eb306910 Zea mays HOM05D007617 ORTHO05D007195 3.0e-06 55.8 48 66.7
Ah.03g133500 Amaranthus hybridus HOM05D007617 ORTHO05D007195 3.9e-06 55.5 120 36.7
AT5G63150 Arabidopsis thaliana HOM05D010525 ORTHO05D007195 5.1e-06 55.1 146 36.3
MSTRG.15542 Avicennia marina HOM05D007617 ORTHO05D007195 6.7e-06 54.7 140 39.3
THA.LOC109117150 Tarenaya hassleriana HOM05D007617 ORTHO05D007195 8.7e-06 54.3 143 37.8


User provided reference genes

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