Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 3.6e-106 388.3 196 100.0
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 3.2e-99 365.2 196 93.9
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.3e-84 316.6 182 92.9
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 1.9e-83 312.8 196 79.6
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 5.6e-83 311.2 196 77.6
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 1.6e-82 309.7 196 76.5
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 2.8e-82 308.9 196 77.0
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 4.7e-82 308.1 196 77.0
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 1.0e-81 307.0 196 77.0
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.8e-81 306.2 196 76.5
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 4.0e-81 305.1 193 77.2
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 6.8e-81 304.3 195 76.9
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 8.9e-81 303.9 196 75.5
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.2e-80 303.5 196 76.0
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 1.2e-80 303.5 196 76.0
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 1.2e-80 303.5 196 76.0
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.0e-80 302.8 193 77.2
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.6e-80 302.4 196 76.0
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 2.6e-80 302.4 196 76.0
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 7.5e-80 300.8 196 73.0
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 7.5e-80 300.8 196 76.5
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 7.5e-80 300.8 195 75.4
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 1.3e-79 300.1 196 76.0
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 1.3e-79 300.1 193 76.7
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 2.2e-79 299.3 196 75.0
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 2.2e-79 299.3 196 77.0
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.2e-79 299.3 195 75.4
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 2.2e-79 299.3 196 77.0
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.2e-79 299.3 196 76.0
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 2.2e-79 299.3 196 76.5
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 3.7e-79 298.5 196 75.0
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 3.7e-79 298.5 193 74.6
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 6.4e-79 297.7 192 76.0
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 6.4e-79 297.7 196 73.5
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.1e-78 297.0 195 74.9
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.1e-78 297.0 196 75.5
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 1.1e-78 297.0 196 75.0
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 1.1e-78 297.0 196 76.0
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 1.4e-78 296.6 196 75.5
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 2.4e-78 295.8 193 74.6
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 3.2e-78 295.4 195 74.9
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 3.2e-78 295.4 196 75.0
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 4.1e-78 295.0 196 75.5
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 5.4e-78 294.7 196 75.5
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 5.4e-78 294.7 193 74.6
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 7.0e-78 294.3 194 75.3
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 9.2e-78 293.9 193 74.1
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 9.2e-78 293.9 193 74.6
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 1.2e-77 293.5 196 74.5
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 1.6e-77 293.1 193 73.1
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 2.0e-77 292.7 196 73.5
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 2.7e-77 292.4 192 75.0
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 3.5e-77 292.0 193 75.1
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 3.5e-77 292.0 196 69.9
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 3.5e-77 292.0 196 69.9
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 7.8e-77 290.8 196 71.9
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 1.7e-76 289.7 195 72.8
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 1.7e-76 289.7 195 73.3
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 1.7e-76 289.7 193 73.6
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 3.0e-76 288.9 196 70.4
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 3.0e-76 288.9 192 74.5
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 5.0e-76 288.1 190 74.7
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 6.6e-76 287.7 193 73.1
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 1.1e-75 287.0 196 71.9
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 3.3e-75 285.4 196 70.4
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 4.3e-75 285.0 196 69.9
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 5.6e-75 284.6 195 69.7
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 5.6e-75 284.6 196 70.4
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 9.5e-75 283.9 196 71.4
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 9.5e-75 283.9 196 71.4
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 1.2e-74 283.5 196 69.9
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 1.2e-74 283.5 196 70.9
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 1.2e-74 283.5 196 70.4
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 1.2e-74 283.5 196 72.4
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 2.1e-74 282.7 196 70.9
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 2.8e-74 282.3 196 68.4
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 3.6e-74 282.0 194 71.6
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 8.0e-74 280.8 196 70.9
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 1.1e-73 280.4 196 69.9
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 2.3e-73 279.3 196 71.4
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 2.3e-73 279.3 196 70.9
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 2.3e-73 279.3 196 70.9
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 3.1e-73 278.9 196 70.4
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 3.1e-73 278.9 196 68.4
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 4.0e-73 278.5 193 73.1
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 6.8e-73 277.7 196 69.9
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 1.2e-72 276.9 196 70.4
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 2.6e-72 275.8 196 69.9
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 2.6e-72 275.8 196 71.9
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 3.4e-72 275.4 196 68.9
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 4.4e-72 275.0 196 68.9
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 4.4e-72 275.0 196 68.4
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 5.8e-72 274.6 196 69.4
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 5.8e-72 274.6 196 68.4
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 1.3e-71 273.5 196 68.4
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.3e-71 273.5 196 70.9
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 1.7e-71 273.1 189 68.8
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 2.2e-71 272.7 196 68.9
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 2.2e-71 272.7 196 71.4
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 4.9e-71 271.6 196 70.4
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 1.1e-70 270.4 196 69.9
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.9e-70 269.6 165 78.2
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 2.4e-70 269.2 196 67.3
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 9.2e-70 267.3 196 66.8
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 2.1e-69 266.2 169 75.1
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 3.5e-69 265.4 196 67.3
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 2.3e-68 262.7 192 65.6
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 3.6e-66 255.4 165 75.2
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 8.1e-66 254.2 194 62.9
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 6.8e-65 251.1 195 64.1
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 3.4e-64 248.8 196 62.8
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 1.3e-63 246.9 195 61.5
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 2.8e-58 229.2 206 59.7
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 1.4e-57 226.9 192 59.4
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 1.3e-55 220.3 165 64.2
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 1.7e-55 219.9 133 82.0
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 3.4e-48 195.7 195 52.8
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 5.8e-48 194.9 191 52.4
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 7.6e-48 194.5 195 53.3
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 1.2e-45 187.2 196 51.0
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 3.0e-44 182.6 119 70.6
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 6.6e-44 181.4 202 45.0
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 1.9e-43 179.9 122 73.8
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 4.3e-43 178.7 195 48.2
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 4.2e-38 162.2 132 62.9
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 2.7e-37 159.5 220 36.8
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.8e-36 156.8 98 78.6
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 6.7e-36 154.8 120 65.0
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 3.4e-32 142.5 197 41.6
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 4.8e-26 122.1 130 51.5
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 1.0e-23 114.4 67 86.6
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 8.4e-23 111.3 91 59.3
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 5.1e-20 102.1 60 83.3
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 2.5e-19 99.8 85 63.5
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 1.9e-14 83.6 96 41.7
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 4.3e-11 72.4 233 31.8
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 2.8e-10 69.7 43 79.1
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 3.7e-10 69.3 44 77.3
SGA_v2.0_scaffold250G44984 Striga asiatica HOM05D005616 ORTHO05D401959 7.2e-06 55.1 60 53.3


User provided reference genes

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