Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.3e-309 1065.4 519 100.0
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 8.5e-248 860.1 513 80.1
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 8.5e-240 833.6 509 77.2
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.2e-238 829.7 519 76.1
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.2e-238 829.7 519 76.1
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 6.8e-237 823.9 508 76.2
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 8.3e-235 817.0 509 76.4
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 2.4e-234 815.5 513 75.2
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 1.3e-232 809.7 484 77.9
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 3.2e-231 805.1 511 74.8
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 4.7e-230 801.2 509 74.5
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.0e-229 798.5 498 75.5
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 3.0e-229 798.5 496 75.0
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 6.8e-229 797.3 500 74.6
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 1.2e-228 796.6 496 75.2
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.3e-227 793.1 511 74.0
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 1.3e-227 793.1 512 72.9
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 6.3e-227 790.8 520 73.8
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 7.0e-226 787.3 485 75.1
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 7.0e-226 787.3 509 72.9
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 7.7e-225 783.9 503 73.8
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 2.3e-224 782.3 510 71.6
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 2.3e-224 782.3 509 71.9
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 3.8e-224 781.6 521 72.9
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 5.0e-224 781.2 511 72.2
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 6.6e-224 780.8 510 71.2
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 6.6e-224 780.8 500 73.6
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.1e-223 780.0 518 71.4
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 1.1e-223 780.0 479 73.9
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 4.2e-223 778.1 503 73.6
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 1.6e-222 776.2 510 72.7
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 2.1e-222 775.8 550 67.6
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 3.6e-222 775.0 493 73.6
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 8.0e-222 773.9 505 71.7
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 3.0e-221 771.9 472 76.3
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 4.0e-221 771.5 505 73.7
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 6.8e-221 770.8 491 73.5
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 8.9e-221 770.4 523 70.2
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 2.0e-220 769.2 509 71.3
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 5.7e-220 767.7 511 70.6
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 7.5e-220 767.3 515 70.3
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 1.3e-219 766.5 496 71.8
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 2.9e-219 765.4 501 70.7
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 6.4e-219 764.2 513 70.6
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 1.4e-218 763.1 504 71.4
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 5.4e-218 761.1 509 69.5
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 7.0e-218 760.8 503 72.4
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.2e-217 760.0 514 71.0
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 4.6e-217 758.1 509 70.9
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 5.9e-217 757.7 487 71.5
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 1.0e-216 756.9 497 72.2
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 1.7e-216 756.1 505 69.9
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 3.9e-216 755.0 513 69.4
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.5e-215 753.1 493 72.2
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 2.5e-215 752.3 484 71.7
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 5.6e-215 751.1 509 69.9
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.2e-214 750.0 515 69.1
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.8e-214 748.8 490 71.8
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.7e-214 748.0 515 68.9
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 6.2e-214 747.7 490 71.8
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 8.0e-214 747.3 484 70.9
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 3.1e-213 745.3 518 69.1
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 5.2e-213 744.6 490 70.2
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.3e-211 740.0 510 68.6
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 1.7e-211 739.6 502 68.9
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 8.3e-211 737.3 501 68.9
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.4e-210 736.5 485 69.7
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 2.7e-209 732.3 488 69.9
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 3.5e-209 731.9 460 73.7
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 1.0e-208 730.3 476 70.4
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 1.0e-208 730.3 499 68.7
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 5.0e-208 728.0 455 74.1
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.5e-207 725.7 477 71.7
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 5.6e-207 724.5 465 73.1
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 7.3e-207 724.2 509 66.8
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 1.2e-206 723.4 460 73.0
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 2.8e-206 722.2 491 68.6
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.2e-205 718.0 509 66.4
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 1.2e-204 716.8 493 67.5
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 2.0e-204 716.1 511 66.5
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.6e-204 715.7 496 67.5
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 2.9e-203 712.2 502 67.7
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 3.2e-202 708.8 503 67.2
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 3.2e-202 708.8 521 64.9
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 2.3e-200 702.6 524 64.5
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 3.0e-200 702.2 519 66.7
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 5.1e-200 701.4 503 67.2
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 6.6e-200 701.0 503 67.0
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 6.6e-200 701.0 503 67.0
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.1e-199 700.3 495 68.1
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 1.1e-199 700.3 503 66.4
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 3.1e-197 692.2 526 64.6
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 1.1e-191 673.7 550 60.9
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 8.7e-184 647.5 480 65.2
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 1.9e-175 619.8 515 57.9
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 2.1e-174 616.3 490 61.4
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 1.2e-156 557.4 378 69.6
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 3.7e-150 535.8 355 69.6
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 1.4e-149 533.9 370 68.9
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 8.5e-147 524.6 338 71.9
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 3.3e-143 512.7 367 67.3
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.3e-118 431.0 485 49.1
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 8.8e-112 408.3 308 62.0
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.5e-108 396.0 312 59.3
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 3.3e-98 363.2 252 65.1
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 9.5e-90 335.1 214 67.8
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.1e-74 285.0 178 75.3
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 1.1e-72 278.5 183 66.7
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.1e-61 241.9 149 76.5
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 5.4e-61 239.6 148 70.3
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 2.4e-24 117.9 104 57.7
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 2.5e-13 81.3 61 63.9
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 4.0e-11 73.9 79 46.8
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 5.2e-11 73.6 83 45.8


User provided reference genes

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