Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 3.4e-124 448.4 232 100.0
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 1.5e-90 336.7 236 75.8
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 2.1e-89 332.8 235 75.7
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 6.1e-89 331.3 237 74.3
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 1.2e-87 327.0 235 73.6
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 4.9e-86 321.6 234 74.8
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 1.8e-85 319.7 235 69.4
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 1.2e-84 317.0 235 71.5
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 2.0e-84 316.2 231 74.0
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 3.5e-84 315.5 229 72.9
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 2.3e-83 312.8 240 67.9
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 3.0e-83 312.4 231 69.7
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 7.3e-82 307.8 238 67.2
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 9.5e-82 307.4 226 73.0
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 1.2e-81 307.0 237 70.0
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 8.0e-81 304.3 234 69.7
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 1.4e-80 303.5 225 69.3
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 1.8e-80 303.1 236 71.6
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 3.1e-80 302.4 236 68.2
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 3.1e-80 302.4 236 67.4
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 4.0e-80 302.0 235 69.4
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 5.2e-80 301.6 236 71.2
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 6.8e-80 301.2 232 69.8
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 6.8e-80 301.2 237 68.8
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.0e-79 299.7 232 66.8
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.0e-79 299.7 232 66.8
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 2.6e-79 299.3 247 64.0
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.6e-79 299.3 232 66.8
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 3.4e-79 298.9 234 66.2
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 4.4e-79 298.5 232 66.8
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 7.5e-79 297.7 231 66.7
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 9.8e-79 297.4 234 67.5
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.2e-78 296.2 237 66.2
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 2.2e-78 296.2 239 67.4
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 2.9e-78 295.8 230 68.3
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 6.4e-78 294.7 229 69.4
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 8.3e-78 294.3 234 67.9
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 1.1e-77 293.9 228 71.5
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 1.4e-77 293.5 232 67.7
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 1.4e-77 293.5 235 66.4
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 1.4e-77 293.5 233 68.2
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.4e-77 292.7 233 67.4
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 3.2e-77 292.4 232 68.5
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 5.4e-77 291.6 232 67.2
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 7.0e-77 291.2 232 67.2
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 7.0e-77 291.2 229 69.0
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 9.2e-77 290.8 234 66.7
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 3.5e-76 288.9 229 66.8
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 3.5e-76 288.9 229 66.8
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 3.5e-76 288.9 231 66.2
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 4.6e-76 288.5 234 67.5
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 4.6e-76 288.5 227 68.7
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 6.0e-76 288.1 229 66.8
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 6.0e-76 288.1 229 66.8
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 6.0e-76 288.1 240 64.6
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 6.0e-76 288.1 230 67.0
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 2.3e-75 286.2 238 64.3
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 3.0e-75 285.8 232 65.5
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 8.6e-75 284.3 187 75.4
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 1.1e-74 283.9 235 66.0
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 1.5e-74 283.5 232 64.2
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 1.5e-74 283.5 223 64.1
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 4.3e-74 282.0 231 68.4
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 1.6e-73 280.0 235 63.4
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 3.6e-73 278.9 200 72.0
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 6.2e-73 278.1 233 63.5
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 1.2e-71 273.9 237 63.3
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 1.2e-71 273.9 236 63.6
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 1.5e-71 273.5 260 58.8
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 3.4e-71 272.3 236 62.7
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 9.9e-71 270.8 227 63.0
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 1.1e-69 267.3 237 62.0
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 2.4e-69 266.2 243 62.6
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 4.1e-69 265.4 241 62.2
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 9.2e-69 264.2 233 63.1
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 2.1e-68 263.1 238 62.2
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 4.6e-68 261.9 214 64.0
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.0e-67 260.8 207 62.3
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 1.3e-67 260.4 242 59.9
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 6.6e-67 258.1 222 60.8
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 1.2e-65 253.8 240 58.3
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 2.8e-65 252.7 229 59.8
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 1.1e-64 250.8 229 62.0
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.4e-64 249.6 222 61.3
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 7.6e-63 244.6 225 59.1
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 1.9e-61 240.0 228 57.0
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 9.2e-61 237.7 237 56.5
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 3.9e-59 232.3 167 68.9
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 2.5e-58 229.6 145 78.6
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 4.3e-58 228.8 233 59.2
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 9.6e-58 227.6 191 61.8
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 6.2e-57 224.9 221 57.0
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 6.9e-56 221.5 226 54.4
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 2.6e-55 219.5 234 55.1
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 3.2e-53 212.6 142 74.6
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 3.5e-52 209.1 139 76.3
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 8.1e-49 198.0 139 74.1
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 1.3e-43 180.6 237 50.2
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 5.1e-43 178.7 124 74.2
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 9.6e-42 174.5 137 67.2
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 3.1e-40 169.5 192 46.4
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 2.6e-39 166.4 187 46.5
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 2.2e-38 163.3 95 75.8
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 1.1e-37 161.0 213 41.3
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 7.9e-36 154.8 231 45.9
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 2.3e-35 153.3 189 44.4
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 3.3e-34 149.4 138 59.4
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.6e-33 147.1 142 60.6
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 1.0e-30 137.9 177 41.8
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 5.7e-26 122.1 163 39.9
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 1.6e-25 120.6 232 39.2
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 6.1e-20 102.1 91 61.5
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 1.3e-14 84.3 93 57.0
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 3.8e-14 82.8 57 70.2
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 6.7e-11 72.0 161 29.2
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 2.0e-10 70.5 152 24.3
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 1.4e-08 64.3 229 29.3


User provided reference genes

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